1LKX,4BYF,4L79,4A7F


Conserved Protein Domain Family
MYSc_Myo1

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cd01378: MYSc_Myo1 
Click on image for an interactive view with Cn3D
class I myosin, motor domain
Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. The catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. There are 5 myosin subclasses with subclasses c/h, d/g, and a/b have an IQ domain and a TH1 domain. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. CyMoBase classifications were used to confirm and identify the myosins in this hierarchy.
Statistics
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PSSM-Id: 276829
Aligned: 86 rows
Threshold Bit Score: 960.078
Created: 5-Feb-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 30 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:1LKX: Dictyostelium discoideum class I myosin, MyoE, bound to MgADP.VO4, contacts at 4A
  • Comment:composed of the purine-binding loop, the P-loop, Switch-1, and Switch-2
  • Comment:the residues of the P-loop wrap around the triphosphate region of the nucleotide and the N-terminal region forms the binding pocket for the nucleotide

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                 ####    #                                           #
1LKX_A      22 NAFIENLTMRhksdniYTYIGDVVISTNPFKnlniYKESDIKAYngrykyemPPHMYALANDAYRSMRqsqenqcviisG 101  Dictyostelium di...
Q23979      35 EAFIGNLKKRfqedliYTYIGQVLISVNPYKqlpiYTDDHVKAYrnkhfyemPPHIFAVTDNAFRSLIeenrgqcvlisG 114  fruit fly
P10568      22 ESLIRNLQLRyekkeiYTYIGNVLVSVNPYQqlpiYDLEFVAKYrdytfyelKPHIYALANMAYQSLRdrdrdqcilitG 101  cattle
O88329      22 ESLIKNLQLRyenkeiYTYIGNVVISMNPYEqlpiYGPEFIAKYrdytfyelKPHIYALANVAYQSLKdrdrdqcilitG 101  house mouse
Q62774      14 ESLIKNLQLRyekkeiYTYIGNVVISMNPYQqlpiYGPEFIAKYrdytfyelKPHIYALANVAYQSLKdrdrdqcilitG 93   Norway rat
P46735      29 ETFIDNLKKRfdhneiYTYIGSVVISVNPYRslpiYSPEKVEDYrnrnfyelSPHIFALSDEAYRSLRdqdkdqcilitG 108  house mouse
4L79_A      29 ETFIDNLKKRfdhneiYTYIGSVVISVNPYRslpiYSPEKVEDYrnrnfyelSPHIFALSDEAYRSLRdqdkdqcilitG 108  Norway rat
Q05096      29 ETFIDNLKKRfdhneiYTYIGSVVISVNPYRslpiYSPEKVEDYrnrnfyelSPHIFALSDEAYRSLRdqdkdqcilitG 108  Norway rat
P47807      25 ESLLRTLQERfsrgeiYTYIGEVVISVNPYKplpiYTPEKVEEYhncnffavKPHIYAIADDAYRSLRdrdrdqcilitG 104  chicken
Q9UBC5      22 ESLLKNLQLRyenkeiYTYIGNVVISVNPYQqlpiYGPEFIAKYqdytfyelKPHIYALANVAYQSLRdrdrdqcilitG 101  human
Feature 1      #######                                        ###########                      
1LKX_A     102 ESGAGKTEASKKIMQFLTFVSSnqspngERISKMLLdSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNaVGSPIGGKITN 181  Dictyostelium di...
Q23979     115 ESGSGKTEASKKVLQFIAACSGnqt-tvEGVKDKLLkSNPVLEAFGNAKTNRNDNSSRFGKYMDIQFDfKGAPIGGNILN 193  fruit fly
P10568     102 ESGAGKTEASKLVMSYVAAVCGkge-qvNSVKEQLLqSNPVLEAFGNAKTIRNNNSSRFGKYMDIEFDfKGFPLGGVITN 180  cattle
O88329     102 ESGAGKTEASKLVMSYVAAVCGkge-qvNSVKEQLLqSNPVLEAFGNAKTIRNNNSSRFGKYMDIEFDfKGSPLGGVITN 180  house mouse
Q62774      94 ESGAGKTEASKLVMSYVAAVCGkge-qvNSVKEQLLqSNPVLEAFGNAKTIRNDNSSRFGKYMDIEFDfKGSPLGGVITN 172  Norway rat
P46735     109 ESGAGKTEASKLVMSYVAAVCGkga-evNQVKEQLLqSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDfKGDPLGGVISN 187  house mouse
4L79_A     109 ESGAGKTEASKLVMSYVAAVCGkga-evNQVKEQLLqSTPVLEAFGNAKTVRNDNSSRFGKYMDIEFDfKGDPLGGVISN 187  Norway rat
Q05096     109 ESGAGKTEASKLVMSYVAAVCGkga-evNQVKEQLLqSTPVLEAFGNAKTVRNDNSSRFGKYMDIEFDfKGDPLGGVISN 187  Norway rat
P47807     105 ESGAGKTEASKLVMSYVAAVSSkge-evDKVKEQLLqSNPVLEAFGNAKTIRNDNSSRFGKYMDVEFDfKGDPLGGVISN 183  chicken
Q9UBC5     102 ESGSGKTEASKLVMSYVAAVCGkge-qvNSVKEQLLqSNPVLEAFGNAKTIRNNNSSRFGKYMDIEFDfKGSPLGGVITN 180  human
Feature 1                                                                                      
1LKX_A     182 YLLEKSRVVGRtqGERSFHIFYQMLKGLSQSKLDElgltpnapayeylkksgcfdvstiDDSGEFKIIVKAMETLGlkeS 261  Dictyostelium di...
Q23979     194 YLLEKSRVVAQmgGERNFHIFYQLLAGADEALLQElrleraldtysyltdglngtvtriNDADSFKQVQQALTVIDftkE 273  fruit fly
P10568     181 YLLEKSRVVKQleGERNFHIFYQLLAGADAQLLKAlklerdtggyay-lnpdtsrvdgmDDDANFKVLQSAMTVIGfsdE 259  cattle
O88329     181 YLLEKSRVVKQlkGERNFHIFYQLLAGADAQLLKAlkleedtsvygy-lngevskvngmDDASNFRAVQHAMSVIGfseE 259  house mouse
Q62774     173 YLLEKSRVVKQlkGERNFHIFYQLLAGADTQLLKAlkleedargyay-lngevsrvngmDDASNFRAVQNAMAVIGfseE 251  Norway rat
P46735     188 YLLEKSRVVKQprGERNFHVFYQLLSGASEELLYKlklerdfsryny-lsldsakvngvDDAANFRTVRNAMQIVGfldH 266  house mouse
4L79_A     188 YLLEKSRVVKQprGERNFHVFYQLLSGASEELLHKlklerdfsryny-lsldsakvngvDDAANFRTVRNAMQIVGfsdP 266  Norway rat
Q05096     188 YLLEKSRVVKQprGERNFHVFYQLLSGASEELLHKlklerdfsryny-lsldsakvngvDDAANFRTVRNAMQIVGfsdP 266  Norway rat
P47807     184 YLLEKSRIVRHvkGERNFHIFYQLLAGGSAQLLQQlklrpdcshygy-lnheksvlpgmDDAANFRAMQDAMAIIGfapA 262  chicken
Q9UBC5     181 YLLEKSRLVKQlkGERNFHIFYQLLAGADEQLLKAlklerdttgyay-lnhevsrvdgmDDASSFRAVQSAMAVIGfseE 259  human
Feature 1                                                                                      
1LKX_A     262 DQNSIWRILAAILHIGNitfaeaaeqrtgtttvkvsdtkslAAAASClktdqQSLSIALCYRSIstgvgkrcsvisvpMD 341  Dictyostelium di...
Q23979     274 EQREIFGIVASILHLGNvgftevegn------akvnsrdlvVTAARLlgvnaSELEAALTHRTIdargd----vvtspLN 343  fruit fly
P10568     260 EIRQVLEVAALVLKLGNvelinefqangv-pasgirdgrgvQEIGELvglnsVELERALCSRTMetake----kvvttLN 334  cattle
O88329     260 EIRQVLEVTALVLKLGNvkltdefqangi-pasgicdgkgiQEIGEMmglnsTELERALCSRTMetgke----kvvtvLN 334  house mouse
Q62774     252 EIRQVLEVTALVLKLGNvklagefqangl-pasgvcdgkgiQEIGEMmglnsVELEKALSSRTMetgke----kvvtvLN 326  Norway rat
P46735     267 EAEAVLEVVAAVLKLGNiefkpesrvngl-deskikdknelKEICELtsidqVVLERAFSFRTVeakqe----kvsttLN 341  house mouse
4L79_A     267 EAESVLEVVAAVLKLGNiefkpesrmngl-deskikdknelKEICELtsidqVVLERAFSFRTVeakqe----kvsttLN 341  Norway rat
Q05096     267 EAESVLEVVAAVLKLGNiefkpesrmngl-deskikdknelKEICELtsidqVVLERAFSFRTVeakqe----kvsttLN 341  Norway rat
P47807     263 EVTALLEVTAVVLKLGNvklsscfqasgm-eassiteprelQEISQLigldpSTLEQALCSRTVkvrde----svltaLS 337  chicken
Q9UBC5     260 EIRQVLEVTSMVLKLGNvlvadefqasgi-pasgirdgrgvREIGEMvglnsEEVERALCSRTMetake----kvvtaLN 334  human
Feature 1                                                     ######                           
1LKX_A     342 CNQAAYSRDALAKALYERLFNWLVSKINTIInct---teKGPVIGILDIYGFEVFqnnSFEQLNINFCNEKLQQLFIELT 418  Dictyostelium di...
Q23979     344 QELAIYARDALAKAVYDRLFSWLVQRLNISLqaketrasRNNVMGILDIYGFEIFqknSFEQFCINFCNEKLQQLFIELT 423  fruit fly
P10568     335 VIQAQYARDALAKNIYSRLFNWLVNRINESIkvg--tgeKRKVMGVLDIYGFEILednSFEQFVINYCNEKLQQVFIEMT 412  cattle
O88329     335 VTQAQYARDALAKNIYSRLFDWIVKRINESIkvg--tgeKKKVMGVLDIYGFEILednSFEQFVINYCNERLQQVFIELT 412  house mouse
Q62774     327 VIQAQYARDALAKNIYSRLFDWIVNRINESIkvg--tgeKRKVMGVLDIYGFEILednSFEQFVINYCNEKLQQVFIELT 404  Norway rat
P46735     342 VAQAYYARDALAKNLYSRLFSWLVNRINESIkaq--tkvRKKVMGVLDIYGFEIFednSFEQFIINYCNEKLQQIFIELT 419  house mouse
4L79_A     342 VAQAYYARDALAKNLYSRLFSWLVNRINESIkaq--tkvRKKVMGVLDIYGFEIFednSFEQFIINYCNEKLQQIFIELT 419  Norway rat
Q05096     342 VAQAYYARDALAKNLYSRLFSWLVNRINESIkaq--tkvRKKVMGVLDIYGFEIFednSFEQFIINYCNEKLQQIFIELT 419  Norway rat
P47807     338 VSQGYYGRDALAKNIYSRLFDWLVNRINTSIqvk--pgkQRKVMGVLDIYGFEIFqdnGFEQFIINYCNEKLQQIFILMT 415  chicken
Q9UBC5     335 VMQAQYARDALAKNIYSRLFDWIVNRINESIkvg--igeKKKVMGVLDIYGFEILednSFEQFVINYCNEKLQQVFIEMT 412  human
Feature 1                                                                                      
1LKX_A     419 LKSEQEEYvrEGIEWKNIeYFNNKPICELIEkkpIGLISLLDEAClia-ksTDQTFLDSIckqfeknphlqs-----yvv 492  Dictyostelium di...
Q23979     424 LKSEQDEYrrEGIEWIPVeYFDNKVICNLIEekhKGIISILDEEClrpgepTDKTFLEKLtqklaqhhhyvche--kapa 501  fruit fly
P10568     413 LKEEQEEYkrEGIPWVKVeYFDNGIICNLIEhnqRGILAMLDEEClrpgvvSDSTFLAKLnqlfskhshyeskvtqnaqr 492  cattle
O88329     413 LKEEQEEYkrEGIPWTKVeYFDNGIICNLIEhsqRGILAMLDEEClrpgvvSDSTFLAKLnqlfskhshyeskvsqnaqr 492  house mouse
Q62774     405 LKEEQEEYkrEGIPWTKVeYFDNGIICDLIEhsqRGILAMLDEEClrpgvvSDTTFLAKLnqlfskhshyeskvtqnaqr 484  Norway rat
P46735     420 LKEEQEEYirEDIEWTHIdYFNNAIICDLIEnntNGILAMLDEEClrpgtvTDETFLEKLnqvcathqhfesrmskcsrf 499  house mouse
4L79_A     420 LKEEQEEYirEDIEWTHIdYFNNAIICDLIEnntNGILAMLDEEClrpgtvTDETFLEKLnqvcathqhfesrmskcsrf 499  Norway rat
Q05096     420 LKEEQEEYirEDIEWTHIdYFNNAIICDLIEnntNGILAMLDEEClrpgtvTDETFLEKLnqvcathqhfesrmskcsrf 499  Norway rat
P47807     416 LKEEQEEYvrEGIQWTPVeFFDNSIICDLIEnskVGILAMLDEEClrpgtvNEDTFITKLnqifashkryesketlnakh 495  chicken
Q9UBC5     413 LKEEQEEYkrEGIPWTKVdYFDNGIICKLIEhnqRGILAMLDEEClrpgvvSDSTFLAKLnqlfskhghyeskvtqnaqr 492  human
Feature 1                                                                                      
1LKX_A     493 skdrsigdtCFRLKHYAGDVTYDVRGFLDKNKdTLFGDLISSMQSssdplvqglfppt-rpedskkrpetaGSQFRNAMN 571  Dictyostelium di...
Q23979     502 hikkimlrdEFRLVHYAGEVTYSVNGFLDKNNdLLFRDLKETLSKagngivrncfpe--kelrslkrpetaITQFRASLN 579  fruit fly
P10568     493 qydhsmglsCFRICHYAGKVTYNVNSFIDKNNdLLFRDLSQAMWKarhpllrslfpegdpkqaslkrpptaGAQFKSSVT 572  cattle
O88329     493 qydrtmglsCFRISHYAGKVTYNVTGFIDKNNdLLFRDLSQTMWKaqhpllkslfpegnpkeaslkrpptaGTQFKNSVA 572  house mouse
Q62774     485 qydrtmglsCFRICHYAGKVTYDVTSFIDKNNdLLFRDLSQTMWKaqhpllhslfprgnpkeaspkrpptaGTQFKNSVA 564  Norway rat
P46735     500 lndttlphsCFRIQHYAGKVLYQVEGFVDKNNdLLYRDLSQAMWKaghslikslfpegnpakvnlkrpptaGSQFKASVA 579  house mouse
4L79_A     500 lndttlphsCFRIQHYAGKVLYQVEGFVDKNNdLLYRDLSQAMWKaghalikslfpegnpakvnlkrpptaGSQFKASVA 579  Norway rat
Q05096     500 lndttlphsCFRIQHYAGKVLYQVEGFVDKNNdLLYRDLSQAMWKaghalikslfpegnpakvnlkrpptaGSQFKASVA 579  Norway rat
P47807     496 vtdvslplrCFRIHHYAGKVTYNVTGFIEKNNdLLFRDLSQAMWAarhtllrslfpegdpqrpslklppttGSQFKASVA 575  chicken
Q9UBC5     493 qydhtmglsCFRICHYAGKVTYNVTSFIDKNNdLLFRDLLQAMWKaqhpllrslfpegnpkqaslkrpptaGAQFKSSVA 572  human
Feature 1                                                                                      
1LKX_A     572 ALITTLLacSPHYVRCIKSNdnkqagviDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGt 651  Dictyostelium di...
Q23979     580 NLMDILMckEPSYIRCIKPNdlqtanvfNDELVLHQVKYLGLMENLRVRRAGFAYRRTYELFLERYKSLSKSTWPNYKGp 659  fruit fly
P10568     573 TLMKNLYskNPNYIRCIKPNehqqrghfSFELVSVQAQYLGLLENVRVRRAGYAYRQAYGSFLERYRLLSRSTWPRWNGg 652  cattle
O88329     573 VLMKNLYskNPNYIRCIKPNdqqqkgrfTSEMVMVQARYLGLLENVRVRRAGYAFRQGYKPFLERYRLLSRSTWPRWNGd 652  house mouse
Q62774     565 ILMKNLYskNPNYIRCIKPNdqqqqgrfTSELVMVQARYLGLLENVRVRRAGYAFRQAYKPFLERYRLLSRSTWPRWNGe 644  Norway rat
P46735     580 TLMRNLQtkNPNYIRCIKPNdkkaahifNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGp 659  house mouse
4L79_A     580 TLMKNLQtkNPNYIRCIKPNdkkaahifSESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGp 659  Norway rat
Q05096     580 TLMKNLQtkNPNYIRCIKPNdkkaahifSESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGp 659  Norway rat
P47807     576 TLMKNLYskNPNYIRCIKPNdtktamlfTPDLVLAQVRYLGLMENVRVRRAGYAFRQLYQPFLERYKMLSRKTWPRWTGg 655  chicken
Q9UBC5     573 ILMKNLYskSPNYIRCIKPNehqqrgqfSSDLVATQARYLGLLENVRVRRAGYAHRQGYGPFLERYRLLSRSTWPHWNGg 652  human
Feature 1                                     
1LKX_A     652 akqatel--ilqqhnidKEEIRMGKTKVFIR 680  Dictyostelium discoideum
Q23979     660 ggpkagvqqlvkdlgwdEEKYRVGETKLFIR 690  fruit fly
P10568     653 dqegvek--vlgelsmsSEELAFGKTKIFIR 681  cattle
O88329     653 dregvek--vlgsltlsSEELAYGKTKIFIR 681  house mouse
Q62774     645 dregvek--vlgslilsSEELAYGRTKIFIR 673  Norway rat
P46735     660 arsgvev--lfneleipVEEHSFGRSKIFIR 688  house mouse
4L79_A     660 arsgvev--lfneleipVEEYSFGRSKIFIR 688  Norway rat
Q05096     660 arsgvev--lfneleipVEEYSFGRSKIFIR 688  Norway rat
P47807     656 dregaev--llaelkfpPEELAYGHTKIFIR 684  chicken
Q9UBC5     653 dregvek--vlgelsmsSGELAFGKTKIFIR 681  human

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