1P5T,1P5T,1UEF,1UEF,2DLW,2V76


Conserved Protein Domain Family
PTB_DOK1_DOK2_DOK3

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cd01203: PTB_DOK1_DOK2_DOK3 
Click on image for an interactive view with Cn3D
Downstream of tyrosine kinase 1, 2, and 3 proteins phosphotyrosine-binding domain (PTBi)
The Dok family adapters are phosphorylated by different protein tyrosine kinases. Dok proteins are involved in processes such as modulation of cell differentiation and proliferation, as well as in control of the cell spreading and migration The Dok protein contains an N-terminal pleckstrin homology (PH) domain followed by a central phosphotyrosine binding (PTB) domain, which has a PH-like fold, and a proline- and tyrosine-rich C-terminal tail. The PH domain is binds to acidic phospholids and localizes proteins to the plasma membrane, while the PTB domain mediates protein-protein interactions by binding to phosphotyrosine-containing motifs. The C-terminal part of Dok contains multiple tyrosine phosphorylation sites that serve as potential docking sites for Src homology 2-containing proteins such as ras GTPase-activating protein and Nck, leading to inhibition of ras signaling pathway activation and the c-Jun N-terminal kinase (JNK) and c-Jun activation, respectively. There are 7 mammalian Dok members: Dok-1 to Dok-7. Dok-1 and Dok-2 act as negative regulators of the Ras-Erk pathway downstream of many immunoreceptor-mediated signaling systems, and it is believed that recruitment of p120 rasGAP by Dok-1 and Dok-2 is critical to their negative regulation. Dok-3 is a negative regulator of the activation of JNK and mobilization of Ca2+ in B-cell receptor-mediated signaling, interacting with SHIP-1 and Grb2. Dok-4- 6 play roles in protein tyrosine kinase(PTK)-mediated signaling in neural cells and Dok-7 is the key cytoplasmic activator of MuSK (Muscle-Specific Protein Tyrosine Kinase). PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains. This cd is part of the IRS-like subgroup.
Statistics
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PSSM-Id: 269914
Aligned: 32 rows
Threshold Bit Score: 160.846
Created: 4-Feb-2003
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
phosphopeptideputative
Conserved site includes 15 residues -Click on image for an interactive view with Cn3D
Feature 1:phosphopeptide binding site [polypeptide binding site]
Evidence:
  • Structure:1UEF; Dok1 PTB domain binds RET phosphopeptide, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                            #########     #   ##        
1P5T_A         4 XGSQFWVTSQKTEASERCGLQGSYILRVEAEKLTLLTLGAqsqilEPLLFWPYTLLRRYGRDKVXFSFEAGRRCPSGPGT 83  house mouse
1UEF_A         4 MGSQFWVTSQKTEASERCGLQGSYILRVEAEKLTLLTLGAqsqilEPLLFWPYTLLRRYGRDKVMFSFEAGRRCPSGPGT 83  house mouse
CAF88083      46 RMSEFLVEVQKSDAATRCDLQGAYWLQVGQEALLLKDTQKk----SVLREWPYEMLRRYGKDKGALTIEAGRRCESGPGS 121 Tetraodon nigro...
XP_002130339 121 DDQLYDVVIHDTDVTQRLKLRGSYFLYVSTEEVELLDKQTk----KSVIKWPLYQLRKYGRDKQEFSLEAGRRCPSGQGM 196 Ciona intestinalis
EFB17679     141 EVGEFPVVVQRTEAATRCQLKGPYLLVLGQDTIQLREPSSp----QALYTWPYRFLRKFGSDKDVFSFEAGRRCDSGEGL 216 giant panda
EHB11374     158 EVSEFPVVVQKTEAATRCQLKGSYLLALGQDAIQLRENSSs----QVLYSWPYHFLRKFGSDKGMFSFEAGRRCDSGEGL 233 naked mole-rat
XP_001381063 155 EMGEFSVVVQKTEAATRCQLKGPYLLVTGQDGIYLSEPTAp----QPLFVWPYHFLRKFGSDKGVFSFEAGRRCDSGEGL 230 gray short-tail...
NP_001100806 157 EVAEFPVVVQRTEATTRCQLKGPYLLVLGQDDIQLRETSKp----QACYSWPYRFLRKFGSDKGVFSFEAGRRCDSGEGL 232 Norway rat
NP_001192253 157 EVGEFPVVVQRTEAATRCQLKGPYLLRLGQDAIQLSEPANp----QALYTWPYCFLRKFGSDKGVFSFEAGRRCDSGEGL 232 cattle
CAG06098      87 LPPNAEACPKKSDAATRCDLQGAYWLQVGQEALLLKDTQKk----SVLREWPYEMLRRYGKDKGALTIEAGRRCESGPGS 162 spotted green p...
Feature 1                   #      #  # 
1P5T_A        84 FTFQTSQGNDIFQAVEAAIQQQK 106 house mouse
1UEF_A        84 FTFQTSQGNDIFQAVEAAIQQQK 106 house mouse
CAF88083     122 FIFETPQAEKIFYLIQATIKQKT 144 Tetraodon nigroviridis
XP_002130339 197 FTFTTDQYNSIFREVENNVKALA 219 Ciona intestinalis
EFB17679     217 FAFSSPRALDLCRAVAAAIACQR 239 giant panda
EHB11374     234 FAFSSSRAPDMCGAVAVAIARQR 256 naked mole-rat
XP_001381063 231 FAFSCPRASEICSAVGAAIIAHQ 253 gray short-tailed opossum
NP_001100806 233 FAFSSPRAPDICGAVAAAIARQR 255 Norway rat
NP_001192253 233 FAFSSARARDLCGALAAAIARQR 255 cattle
CAG06098     163 FIFETPQAEKIFYLIQATIKQKT 185 spotted green pufferfish

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