1N2Z


Conserved Protein Domain Family
BtuF

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cd01144: BtuF 
Click on image for an interactive view with Cn3D
Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Statistics
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PSSM-Id: 238564
Aligned: 25 rows
Threshold Bit Score: 195.981
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:cobalamin binding residues [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              ##                   #                                   # #             
1N2Z_A        3 PRVITLSPANTELAFAAG--ITPVGVSSYSDYPPQaqkieq-vstwqGMNLERIVALKPDLVIAWRGGNAERq-VDQLAS 78  Escherichia coli
NP_714433     5 KRIICLTEETTELFYLLGieERIVGISAYTVRPLRakkekpkisafiNGNIKRIKELKPDLVIGFSDIQSDL--AKNLIA 82  Leptospira inter...
NP_244269     1 MRLVSICPSNTEKIAYLGlvDQLVGVDDFSDWPTVtrslpr-lgpdlRIDMDKVEALQPDLVVASLSVPGMErnVEELQK 79  Bacillus halodurans
NP_295096    11 LRLASLVASNSDILAALGlsSWVVAVDNHSDAPGLesarr--vgldlDIDVPALAQTRPDLVLASLSVPGQDrvVAEVQA 88  Deinococcus radi...
ZP_00058200  17 RRVVSLVPSLTEAIAHTRr-EALVGATDWCTHPAGldvar--vrgtkNPDRAAIAALRPDLVIANKEENRELd-VRMLRA 92  Thermobifida fusca
NP_733540     1 MRVVSLVPSLTEAVARSVp-GALVGATDWCTHPAGldvvr--vggtkNPDTDRVLSLAPDLVVANEEENRAPd-LDVLRA 76  Streptomyces coe...
NP_661823    45 QRIVSLAPSLTEMLYAIGagPQLVGRTSACDWPAEakkvpv-vgsfgRPSLEMLASMNPDLVLDVDLADDQT--AKKMEE 121 Chlorobium tepid...
NP_227896    69 ERVVSLSPAATRFLVFLGleDKIVGVTDYDSYEAEkvg------amvPVNIEKVVSLNPDLVLMFGGFQLPE--VPKLEK 140 Thermotoga maritima
NP_770800     7 RRIVCLTEETVETLYLLGeqDRIVGVSGYAVRPPQvrrekprvsafvSADIPKVLALEPDLVLAFSDLQAGI--VADLVR 84  Bradyrhizobium j...
AAF95524     26 ERIISLAPHATEIAYAAGlgDKLVAVSEYSDYPPQaleler-vanhqTINIEKILTLKPDLIIAWPAGNPPRe-LAKLRQ 103 Vibrio cholerae ...
Feature 1                                                                                   #   
1N2Z_A       79 LGIkVMWVDatSIEQIANALRQLAPWSpQPDKAEQAAQSLLDQYAQLKAQYadkp---kkrVFLQFGi-----NPPFTSG 150 Escherichia coli
NP_714433    83 EGLnVLVTNqrTILEIFDTLSLLGSIVgKGNETQKLIEGWKRKLDEIERVYssks---qpsVFFQEWd-----EPIITGI 154 Leptospira inter...
NP_244269    80 RDIpHVVYNphSLKEIGECLKDLAKRTgATAKATVAIERYERIIEHYRSLAanve---pvrLYWEWWp-----KPVFTPG 151 Bacillus halodurans
NP_295096    89 AGLpTAVFDpvTLPEILADIRRIGELTgQGARAEQVVQAFETELRALYTDFprs-----prVLVEWWp-----RPIIAAT 158 Deinococcus radi...
ZP_00058200  93 AGIpVWVTViqTVPQALDSLTRLFTEA-LCWPLPDWLVEARRLWSHPLPPVra-------rVAIPVWr-----DPWMVVG 159 Thermobifida fusca
NP_733540    77 AGVeVLVTEvrTVPQAVTELDRVLTACgAPSRPRWLDEAQAAWADPPAPERra-------tAVVPIWr-----RPWMVLG 144 Streptomyces coe...
NP_661823   122 MHIrREHIRcqDPKELPAALRKLGTLTgHTRQADSLATVIEQGLAKYRKEAdakq--hkmrIYLEIWn-----DPLWTGG 194 Chlorobium tepid...
NP_227896   141 AGLkVLVVNpnSLNDIIRDVVLLGTIFdRRDLALEKSEKLREKMLEIGKKTynvppskrpkVLYLISspgpdvKEIWTCG 220 Thermotoga maritima
NP_770800    85 AGLdIHVFNqrDVAGIMAMIRTLGALVgAAKRAQELAQGFELRLAAIAATPrpsp---qpkVYFEEWd-----DPLISGI 156 Bradyrhizobium j...
AAF95524    104 LGFtIYDSQtkTLDEIADNIEALSHYSaNPEVGQKAAHDFRQRLQDLRTQYasnq---pirYFYQLSe-----KPIITLA 175 Vibrio cholerae ...
Feature 1                                    #                                                  
1N2Z_A      151 kesiQNQVLEVC-GGENIFKDs----RVPWPQVSREQVlarSPQAIVITGGPd--------qIPKIKQYWGeq----lkI 213 Escherichia coli
NP_714433   155 s--wVSELIKLA-GGKDCFEHlktksLAKDRIISAIDVakaNPEVYIGSWCGkpm----nfeWVQKHPDWQnvna-ilnH 226 Leptospira inter...
NP_244269   152 gtnwLTEISALA-GGINVYGDt----SIPSVKTDWDDVlnkQPDHICLAWVGiaadk-vkpeLLWKRPNWErmaa-lqeG 224 Bacillus halodurans
NP_295096   159 rdswVTDLLAAL-GAVNALADe----PGRSRPLTLDEVraaRPDLIVCSWCGa--------kKLRPEVIEArg----lgV 221 Deinococcus radi...
ZP_00058200 160 sa-tFTGDLARRlGLANVFADh----PERYPKVALADIdrdDVDLVVLPDEPyaf-----tpQDGPEAFRCap-----tV 224 Thermobifida fusca
NP_733540   145 rd-tFAGDVLARlGVDHLYAAh----AERYPRIPVDELwaaRPDVVVLPDEPyrf-----taDDGPEAFPGlp-----cA 209 Streptomyces coe...
NP_661823   195 snsfVSQLIALA-GGRNIGDAv----EKEYFEVSPEWVirqNPDLIACMYMAnqtp---aadNVKKRPGWQgisa-vrnN 265 Chlorobium tepid...
NP_227896   221 mgsyLNEIISLA-GGVNIASGia--gPNGWPQLSIEYVvsqNPDVIIVGVYIpgteneeikkILNFEPFKEina--vknK 295 Thermotoga maritima
NP_770800   157 g--wVSELIEIA-GGADVFPElrhrqAAKDRIVSADDVrqaAPDVILASWCGkkv----vpaRIRAREGWDeipa-vrdN 228 Bradyrhizobium j...
AAF95524    176 qghwPSEVFSLC-GGVNIFADs----EVPYPQVSIEQVlvkQPQVIFTSEHAi--------aNGHMWRAWQaelsavqnD 242 Vibrio cholerae ...
Feature 1                                  
1N2Z_A      214 PVIPLTSDWFE-RASPRIILAAQQLCN 239 Escherichia coli
NP_714433   227 KVYELDPSIILqPGPALFEEGIDQLVK 253 Leptospira interrogans serovar lai str. 56601
NP_244269   225 KVHALEEPLYC-RPSPRLLLGLKKLAA 250 Bacillus halodurans
NP_295096   222 PVVAIHESGLG-RPGPRLIEGARQLAT 247 Deinococcus radiodurans R1
ZP_00058200 225 LVSGRLLTWYG-PSLLHAKEGLAALVQ 250 Thermobifida fusca
NP_733540   210 LVDGRHLTWYG-PSLAEAPRVLAAALR 235 Streptomyces coelicolor A3(2)
NP_661823   266 RVYDNFDNRLYlRPGPRILEGIAGMKK 292 Chlorobium tepidum TLS
NP_227896   296 RVFAVDGNVAS-QPSPDVFELLDLFYE 321 Thermotoga maritima
NP_770800   229 RIVEIKSPIILqPGPAALTDGLDAIVQ 255 Bradyrhizobium japonicum USDA 110
AAF95524    243 QVWALNADWLN-RPTPRTLDAVEQVCT 268 Vibrio cholerae O1 biovar eltor str. N16961

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