4EIW,1C9K,1U9I,4DT1,5XYN,1YE8,1PVO,2RKW,1G8Y,1GKI,1G64,1G6O,1G18,2Q6T,5LKM,1Q57,4DT1,3BS4,4YDS,1U9I,4EQ6,4EJS,4A8J,4EJS,4A8J,4A8J


Conserved Protein Domain Family
RecA-like_superfamily
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cd01120: RecA-like_superfamily 
RecA-like_NTPases
RecA-like NTPases. This superfamily includes the NTP binding domain of F1 and V1 H(+)ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Links
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Statistics
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PSSM-Id: 410865
Aligned: 27 rows
Threshold Bit Score: 35.1718
Created: 17-May-2012
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Download Cn3D
 
ATP binding
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:contains Walker A and Walker B motifs
  • Structure:1C9K; Salmonella enterica subsp. enterica serovar Typhimurium CobU bound to GMP and pryophosphate , contacts at 4A
    - View structure with Cn3D
Download Cn3D for Viewing 3D StructureScroll to Sequence Alignment Display
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1               ###                            # ##                                   
4EIW_A     76 VLLVGpp-gvGKTHLARAVAgea-------------rvPFITASGsdfvemf---------------------------- 113 Thermus thermophil...
1C9K_C      2 ILVTGga-rsGKSRHAEALIgd--------------apQVLYIATsqilddemaariqhhk------------------- 47  Salmonella typhimu...
1PVO_A    174 GLIVApp-kaGKTMLLQNIAqsiay--------nhpdcVLMVLLIderpeevtemqrlvkge------------------ 226 Escherichia coli
2RKW_A    155 LPIFSas-glPHNEIALQIArqasvp------gsesafAVVFAAMgitneeaqyfmsdfektgal--------------- 212 Methanosarcina mazei
1G8Y_A     33 GALVSpg-gaGKSMLALQLAaqiaggpdllevgelptgPVIYLPAedpptaihhrlhalgahlsaeerq----------- 100 Escherichia coli
1GKI_A     56 LLVNGat-gtGKSVLLRELAytgl----------lrgdRMVIVDPngdmlskfgrdkdiilnpydqrtkgwsffneirnd 124 Escherichia coli
5LKM_A     91 VLIGGdp-giGKSTLLLQVStqls-----------qvgTVLYVSGeesaqqiklraerlgd------------------- 139 Streptococcus pneu...
1Q57_A    245 IMVTSgs-gmVMSTFVRQQAlqwgt---------amgkKVGLAMLeesveetaedliglhnrvrlrqsdslkreiie--- 311 T7
3BS4_A     23 ILIHEedassRGKDILFYILsrkl----------ksdnLVGMFSIsyplqliirilsrfgvdvikylenhrlai------ 86  Pyrococcus horikos...
NP_068602 411 TVFTGpt-gsGKTTFISEYAldlc----------sqgvNTLWGSFeisnvrlarvmltqfaegrledqldky-------- 471 human

Feature 1                                                                                     
4EIW_A        --------------------------------------------------------------------------------     Thermus thermophil...
1C9K_C        --------------------------------------------------------------------------------     Salmonella typhimu...
1PVO_A        --------------------------------------------------------------------------------     Escherichia coli
2RKW_A        --------------------------------------------------------------------------------     Methanosarcina mazei
1G8Y_A        --------------------------------------------------------------------------------     Escherichia coli
1GKI_A    125 ydwqryalsvvprgktdeaeewasygrlllretakklaligtpsmrelfhwttiatfddlrgflegtlaeslfagsneas 204 Escherichia coli
5LKM_A        --------------------------------------------------------------------------------     Streptococcus pneu...
1Q57_A        --------------------------------------------------------------------------------     T7
3BS4_A        --------------------------------------------------------------------------------     Pyrococcus horikos...
NP_068602     --------------------------------------------------------------------------------     human

Feature 1                                                                                     
4EIW_A    114 ---------------------------------------------------vgvgaarVRDLFETakr------------ 130 Thermus thermophil...
1C9K_C     48 -------------------------------------------dgrpahwrtaecwrhLDTLITAdla------------ 72  Salmonella typhimu...
1PVO_A    227 ------------------------------------------vvastfdepasrhvqvAEMVIEKakrlv--------eh 256 Escherichia coli
2RKW_A    213 --------------------------------------eravvflnladdpaverivtPRMALTAaeylay-------eh 247 Methanosarcina mazei
1G8Y_A    101 -----------------------------------avadglliqpligslpnimapewFDGLKRAae------------- 132 Escherichia coli
1GKI_A    205 kaltsarfvlsdklpehvtmpdgdfsirswledpnggnlfitwredmgpalrplisawVDVVCTSilslpe-------ep 277 Escherichia coli
5LKM_A    140 -------------------------------------------idsefylyaetnmqsVRAEVERiq------------- 163 Streptococcus pneu...
1Q57_A    312 ---------------------------ngkfdqwfdelfgndtfhlydsfaeaetdrlLAKLAYMrsg------------ 352 T7
3BS4_A     87 -----------------------------vdtfgsfhgikatmpgvwylegmlssetlPIKYAKAvedhkkvwmdlnlfe 137 Pyrococcus horikos...
NP_068602 472 --------------------------------dhwadrfedlplyfmtfhgqqsirtvIDTMQHAvyv------------ 507 human

Feature 1             ##                                                                      
4EIW_A    131 hapCIVFIDEIdavgrkrgsgv--------gggndereqtlNQLLVEMdgfek----dtaiVVMAATNrp---------- 188 Thermus thermophil...
1C9K_C     73 -pdDAILLECIttmvtnllfalggendpeqwdyaameraidDEIQILIaacq-----rcpaKVVLVTNevgmgivpenrl 146 Salmonella typhimu...
1PVO_A    257 kkdVIILLDSItrlarayntvvpas---gkvltggvdanalHRPKRFFgaarnv-eeggslTIIATALidtgs------- 325 Escherichia coli
2RKW_A    248 gmhVLVILTDItnyaealrqmgaar--nevpgrrgypgymyTDLATLYeragivkgakgsvTQIPILSmpgddi------ 319 Methanosarcina mazei
1G8Y_A    133 -grRLMVLDTLrrfhieee---------------nasgpmaQVIGRMEaiaa-----dtgcSIVFLHHaskgaammg--- 188 Escherichia coli
1GKI_A    278 krrLWLFIDELasl------------------------eklASLADALtkgr-----kaglRVVAGLQstsqld------ 322 Escherichia coli
5LKM_A    164 --pDFLIIDSIqtimspeisg-----------vqgsvsqvrEVTAELMqlak-----tnniAIFIVGHvtke-------- 217 Streptococcus pneu...
1Q57_A    353 lgcDVIILDHIsivvsasge-------------sderkmidNLMTKLKgfak-----stgvVLVVICHlknpdkgkahee 414 T7
3BS4_A    138 greLYGFAISMsgylevft--------------peetlrylETSAEVRyghpay-kkyprgTNFWLWEgvk--------- 193 Pyrococcus horikos...
NP_068602 508 ydiCHVIIDNLqfmmgheql------------stdriaaqdYIIGVFRkfat-----dnncHVTLVIHprkedddk---- 566 human

Feature 1                     
4EIW_A    189 --------diLDPaLL 196 Thermus thermophilus HB8
1C9K_C    147 arhfrdiagrVNQrLA 162 Salmonella typhimurium
1PVO_A    326 -----kmdevIYEeFK 336 Escherichia coli
2RKW_A    320 -----thpipDLSgYI 330 Methanosarcina mazei
1G8Y_A    189 -agdqqqasrGSSvLV 203 Escherichia coli
1GKI_A    323 ----dvygvkEAQtLR 334 Escherichia coli
5LKM_A    218 ------gtlaGPRmLE 227 Streptococcus pneumoniae
1Q57_A    415 grpvsitdlrGSGaLR 430 T7
3BS4_A    194 -------dkrVLLsVY 202 Pyrococcus horikoshii OT3
NP_068602 567 --elqtasifGSAkAS 580 human

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