Conserved Protein Domain Family
PAN_AP_plant
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cd01098: PAN_AP_plant 
Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.
Links
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Statistics
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PSSM-Id: 238531
Aligned: 81 rows
Threshold Bit Score: 53.5942
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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putative
Feature 1:putative binding site
Evidence:
  • Comment:charged pocket believed to be general protein/carbohydrate binding site in diverse family members
  • Citation:PMID 9493272
  • Comment:heparin thought to bind at sulfate ion position
  • Citation:PMID 9817840
Scroll to Sequence Alignment Display
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1                                      # #                 #                          
AAF16627  344 ADSICNGk--------eGFAKLk------rVKIPNTSavnv-dmnITLKECEQRCLKNCSCVAYASAyhesqdgaKGCLT 408  thale cress
S50767    332 VTSACKSn--------eEFPLVqld---sgVGYVGTNffpp-aakTNLTGCKSACTGNCSCVAVFFDqs-----sGNCFL 394  rice
NP_194957 319 ITSPCKKtkdna-tlplQLVSAgd-----gVDYFALGyappfskkTDLDSCKEFCHNNCSCLGLFFQns-----sGNCFL 387  thale cress
AAB62838  326 GDSGEKSd---------TFEAVgdlrydgdVKMSRLQ--------VSKSSCAKTCLGNSSCVGFYHKek-----sNLCKI 383  thale cress
CAB63157  329 VKRLCDHem-------vELNGV--------TTVLRNGtqv---rnISKERCEELCKKDCECGAASYSvs-----eESCVM 385  thale cress
CAE04682  502 NPISCQEkq------nhQFLTLt------dVSYFDGSqti--anaKNREDCKQDCLKNCSCRAVMFRydqn-vsdGECQL 566  Japanese rice
AAN31898  352 SLASCDPkt-------fHYFKIegad-sfmTKYNGGSs-------TTESACGDKCTRDCKCLGFFYNrk-----sSRCWL 411  thale cress
E86304    314 KVKSCDPks-------fHYYRLgg----veHFMTKYNvg----laLGESKCRGLCSGDCKCLGYFFDks-----sFKCWI 373  thale cress
AAO15899  346 SVSSCSGrk------fkYFELKgv-----dHFMAKYTrgd---spVAKSACEEKCSKDCKCLGYFYQsd-----sSRCWI 406  flax
AAP45167  301 QLPECRKdgdkfeqksgDFIDRsk-----nSNSYDNAs-------TSLGDCMKRCWEHCSCVGFTTTsn-----gTGCII 363  Solanum bulbocast...

Feature 1                                
AAF16627  409 WHGNMLDTRTYLSs----gQDFYLRVD 431  thale cress
S50767    395 FNQIGSLQHKGGNtt---rFASFIKVS 418  rice
NP_194957 388 FDYIGSFKTSGNGgs---gFVSYIKIA 411  thale cress
AAB62838  384 LLESPNNLKNSSSwtgvseDVLYIREP 410  thale cress
CAB63157  386 YGIVMGVKQIERVs----gLSYMVKIP 408  thale cress
CAE04682  567 VTEVFSLQSIQPEiih-ynSTAYLKVQ 592  Japanese rice
AAN31898  412 GYELKTLTRTGDSs-----LVAYVKTP 433  thale cress
E86304    374 SYELGTLVKVSDSr-----KVAYIKTP 395  thale cress
AAO15899  407 ANELKTMSRVANQt-----HLAYIKTP 428  flax
AAP45167  364 WNGNGEFQVDESGn----tVKKYVLVS 386  Solanum bulbocastanum

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