1EA0,1LLW


Conserved Protein Domain Family
gltB_C

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cd00982: gltB_C 
Click on image for an interactive view with Cn3D
gltb_C. This domain is found at the C-terminus of the large subunit (gltB) of glutamate synthase (GltS). GltS encodes a complex iron-sulfur flavoprotein that catalyzes the synthesis of L-glutamate from L-glutamine and 2-oxoglutarate. It requires the transfer of ammonia and electrons among three distinct active centers that carry out L-Gln hydrolysis, conversion of 2-oxoglutarate into L-Glu, and electron uptake from a donor. These catalytic sites appear to occur in other domains within the protein, and not the domain in this CD. This particular domain has no known function, but it likely has a structural role as it interacts with the amidotransferase and FMN-binding domains of gltS.
Statistics
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PSSM-Id: 238482
Aligned: 41 rows
Threshold Bit Score: 357.608
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
domain
Conserved site includes 43 residues -Click on image for an interactive view with Cn3D
Feature 1:domain interface
Evidence:
  • Structure:1EAO_A: beta-helix domain interface with other domains, defined using 4.0 A contacts
  • Comment:Sharp inward bend along one face of the domain allows it to wedge itself into the helix core of the protein

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                             ##  #  ##                                  
1EA0_A      1211 LDARIVADarplf----eegeKMQLAYNARNTQRAIGTRLSSMVTRKFGmfgl--------------------qpghITI 1266 Azospirillum b...
NP_694021   1238 LDYQELLPicesa---iedgtPVEFSVAIRNINRVTGALLGHAITERYGehgl--------------------pedtIKL 1294 Oceanobacillus...
NP_353180   1379 LDDAFIELvrsalvdsrreniELGGNRFLNNCNKSVGGQLAVDIERMLNhelsdeqldalpavkrdsrgrrfleagsVRI 1458 Agrobacterium ...
NP_281229   1222 IDYRILLPlckna---vekkePIKLSLEVGNQSRTFATMLSSEILKTYGkdal--------------------dedsIHI 1278 Campylobacter ...
NP_465259   1238 LDMRELVPliqpa---lengeKVTGTFAVRNVDRAIGTIAGSFISKKYGaagl--------------------pedtISL 1294 Listeria monoc...
CAB06231    1248 LDQQLIVMsreal----dsgkPVRFSTTIGNVNRTVGTMLGHELTKAYGgqgl--------------------pdgtIDI 1303 Mycobacterium ...
ZP_00098863 1254 LDMKKLLRvcqpa---lenqkPIRAKLKINNVDRVVGTIIGSEISKRYGeqgl--------------------pedtIKL 1310 Desulfitobacte...
P55037      1261 LDITQLLDlcqpa---iakgeKVTATLPITNINRVVGTIVGNEITKRHWeglp---------------------edtVHL 1316 Synechocystis ...
NP_661305   1199 LDMRVLMAicepa---ikrgeKVSTTLPIKNTNRAAGTIVGHEVTKAYGskgl--------------------pddtIHL 1255 Chlorobium tep...
AAD41675    1236 IDEKIFLDkfkda---ienkiKTNFEIDVTNTDRALGTILGSEITRVNGtdgl--------------------pedtISI 1292 Clostridium sa...
Feature 1            #  ##   #           ###    #  #                    ####  #  #  #        ####
1EA0_A      1267 RLRGTAGQSLGAFAvqGIKLEVMGDANDYVGKGLSGGTIVVRPttssp--letnKNTIIGNTVLYGATAGKLFAAGQAGE 1344 Azospirillum b...
NP_694021   1295 NFNGSAGQSFGAFIpkGMSLKLIGDANDFVGKGLSGGKIIVRPsstvt--fepeKNIIIGNVAFYGASAGEAYIRGIAGE 1372 Oceanobacillus...
NP_353180   1459 DTSGSAGQSFGAFCndGMIMVHTGTCNDGVGKSACGGTIVVRSpgggs--ketgGNVLVGNFALFGATGGRTFVEGQAGD 1536 Agrobacterium ...
NP_281229   1279 KAIGNAGNSFGAFLlkGIKLEIIGDSNDYLGKGLSGGKIIAKIsneat--fspeENIIAGNACLYGATKGEVYLDGIAGE 1356 Campylobacter ...
NP_465259   1295 DFVGSAGQSFGAYTplGMTLRIHGDANDYFGKGLSGGKLIVSPdaktp--ikphDSAIVGNVTLYGATGGFAYMHGKAGA 1372 Listeria monoc...
CAB06231    1304 TFDGSAGNSFGAFVpkGITLRVYGDANDYVGKGLSGGRIVVRPsddapqdyvaeDNIIGGNVILFGATSGEVYLRGVVGE 1383 Mycobacterium ...
ZP_00098863 1311 AFVGSAGQSFGAFVpkGLTLELEGDSNDYLGKGLSGGKIAVYPprtad--fvpeENILIGNVAFYGATSGEAYINGIAGE 1388 Desulfitobacte...
P55037      1317 HFQGSAGQSFGAFIpkGMTLELEGDANDYLGKGLSGGKIIVYPpkgss--fiasENIIAGNVCLYGATAGEVYISGMVGE 1394 Synechocystis ...
NP_661305   1256 KFIGSAGQSLGAFIpkGMTIELVGDANDYIGKGLSGGRIIAYPpkssk--fvpeENIIVGNVAFYGATSGEAFIRGMAGE 1333 Chlorobium tep...
AAD41675    1293 KCNGAAGQSFGAFIpkGLTFEVEGDANDYFGKGLSGGKLIVYPpkkst--fiaeDNILIGNVALYGATSGKVFINGIAGE 1370 Clostridium sa...
Feature 1        #  ## #        ####  ## #            #  #  #               ####                 
1EA0_A      1345 RFAVRNSGATVVVEGCGSNGCEYMTGGTAVILGRVGDNFAAGMTGGMAYVYDld-dsLPLYINDESVIFQRIe-----vG 1418 Azospirillum b...
NP_694021   1373 RFAVRNSGASIVVEGIGDHGCEYMTGGQVIVLGKTGRNFAAGMSGGVAYVFDee-deFKNMVNNSLVQVERVt-----dA 1446 Oceanobacillus...
NP_353180   1537 RFAVRNSGATAVVEGVGDFACEYMTNGAVLNLGSFGKGFGNGMSGGFVYQYDpy-gdLPKKVSHDSILLGSItgedeqaA 1615 Agrobacterium ...
NP_281229   1357 RFCVRNSGALAVVLGTGVHGCEYMTGGQVVVLGDVGANFAAGMSGGVVYIFGr---hNEAHVNTELVDIKDLn------A 1427 Campylobacter ...
NP_465259   1373 RFAVRNSGATAVVEGIGDNGCEYMTGGAVVVLGDIGENFAAGMSGGVAYIYTnnkqaTTAKINHELVNSRSTf-----sT 1447 Listeria monoc...
CAB06231    1384 RFAVRNSGAHAVVEGVGDHGCEYMTGGRVVILGRTGRNFAAGMSGGVAYVYDpd-geLPANLNSEMVELETLd------E 1456 Mycobacterium ...
ZP_00098863 1389 RFCVRNSGVHAVVEGVGDHGCEYMTGGKVVILGKTGRNFAAGMSGGVAYILDf----DENYCNKSMVLLENIq-----sE 1459 Desulfitobacte...
P55037      1395 RFCVRNSGVNTVVEAVGDHGCEYMTGGKVVVLGQTGRNFAAGMSGGVAYIFDet-gdFATRCNSAMVGLEKLe-----dP 1468 Synechocystis ...
NP_661305   1334 RFCVRNSGMEAVVESVGDHGCEYMTGGKVVILGKTGRNFAAGMSGGVAYVYDvd-gaFTGRCNLEMVSLSAVe-----aE 1407 Chlorobium tep...
AAD41675    1371 RFCVRNSGATAVVEGVGAHGLEYMTGGKVVVLGKTGINFAAGMSGGVAYIYEed-pnFRINLNEEMILLEELn------I 1443 Clostridium sa...
Feature 1                                                  
1EA0_A      1419 HYESQLKHLIEEHVTETqSRFAAEILNDWarevtKFWQVVPK 1460 Azospirillum brasilense
NP_694021   1447 NELEELYASIEKHVEYTdSGHAARILAYWekysiSFSRVIPK 1488 Oceanobacillus iheyensis HTE831
NP_353180   1616 IHNQAVHQLLTLHVAETgSAKAAWLLENWeseqhNFAYGMPR 1657 Agrobacterium tumefaciens str. C58 (Cereon)
NP_281229   1428 KDEKELKAVIEKHITYTdSKKAKDILEKFdk--kDFFKVMPR 1467 Campylobacter jejuni subsp. jejuni NCTC 11168
NP_465259   1448 SELTKLKQLIEQHANLTgSDFAQDILQNWeaekaNFIFVIPN 1489 Listeria monocytogenes EGD-e
CAB06231    1457 DDADWLHGTIQVHVDATdSAVGQRILSDWsgqqrHFVKVMPR 1498 Mycobacterium tuberculosis H37Rv
ZP_00098863 1460 AELDEVKEMIRKHVEYThSPQGGKVLADWesyatRFTKVIPK 1501 Desulfitobacterium hafniense
P55037      1469 EEIKDLKELIQNHVNYTdSAKGKAVLADWeasipKFVKVMPR 1510 Synechocystis sp. PCC 6803
NP_661305   1408 DELEWLRSKIEQHVEVTgSELGKGLLATWpnasqRFVKVLPN 1449 Chlorobium tepidum TLS
AAD41675    1444 DDEEELKALIEEHVKVTgSPKANKILYNFetekvKFHKIIPK 1485 Clostridium saccharobutylicum

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