1FDZ,1F6P,1FDY


Conserved Protein Domain Family
NAL

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cd00954: NAL 
Click on image for an interactive view with Cn3D
N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL)
N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Statistics
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PSSM-Id: 188641
Aligned: 14 rows
Threshold Bit Score: 380.117
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1FDZ; N-acetylneuraminate lyase-pyruvate complex
  • Citation:PMID 9047371

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                            #  ###                                   
1FDZ_A      5 LRGVMAALLTPFDQQQALDKASLRRLVQFNIQq-GIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEGKg-kIKLIAHVGC 82  Escherichia coli
1FDY_A      5 LRGVMAALLTPFDQQQALDKASLRRLVQFNIQq-GIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEGKg-kIKLIAHVGC 82  Escherichia coli
NP_110396   8 LQGLVAATITPMTENGEINFSVIGQYVDYLVKeqGVKNIFVNGTTGEGLSLSVSERRQVAEEWVTKGKdklDQVIIHVGA 87  human
NP_345787   7 YKGVIPAFYACYDENGEISQDRVKSLVQYFIDk-GVKGIYVNGSSGECIYQSVEDRKQIIEAVMEVAKg-kLTVINHIAC 84  Streptococcus pneu...
P59407      3 KKLLYAAQMTAFDKDGNINLDGIRALVRYNIDvnKVDGLYVCGSTGEAFMLNTDEKKQVMETVYDEANg-aIDLVAQVGS 81  Lactobacillus plan...
Q92WP0      3 LEGIYSALLTPFSEDESIDRQAIGALVDFQVRl-GIDGVYVGGSSGEAMLQSLDERADYLSDVAAAASg-rLTLIAHVGT 80  Sinorhizobium meli...
Q99WR1      5 LKGLYAALLVPFDENGQVNEQGLKQIAQNAIEteELDGLYVNGSSGENFLLNTEQKKQVFKVAKEAVGd-kVKLIAQVGS 83  Staphylococcus aur...
NP_865456  17 LSGLIAATYTPMKACGDLNLDVVPAMVEKLLLd-GVSGLYVCGSTGEGMSLTTRERQLVASAFVNATAg-rVPVIVQVGH 94  Pirellula sp. 1
AAR98793    4 YEGIFPALVTPFDKNGKVDHGALEKIVNYLIEkqKVDGIYLTGSTGEFLLLSAQERCEIFKTVAKANKk-rVTLIAQVGT 82  Mycoplasma alligat...
NP_975543   4 LKGVFAALLIPYKSDGSIDEQALEKFIDYNIEvsNVDGLYVNGSTGEAFLLSNSERKRILEIVAKHVNk-rVPLIAQVGS 82  Mycoplasma mycoide...
Feature 1                                                             #                       
1FDZ_A     83 VTTAESQQLAASAKRyGFDAVSAVTPFYYp-FSFEEHCDHYRAIIDSad-gLPMVVYNIPalSGVKLTLDQINTLvt--l 158 Escherichia coli
1FDY_A     83 VTTAESQQLAASAKRyGFDAVSAVTPFYYp-FSFEEHCDHYRAIIDSad-gLPMVVYNIPalSGVKLTLDQINTLvt--l 158 Escherichia coli
NP_110396  88 LSLKESQELAQHAAEiGADGIAVIAPFFLk-PWTKDILINFLKEVAAaapaLPFYYYHIPalTGVKIRAEELLDGildki 166 human
NP_345787  85 NNTKDSIELAKHSESvGVDAIAAIPPIYFk-LPEYSIAAYWNAMSEAas-nTDFIIYNIPqlAGVALTGSLYATMrq--n 160 Streptococcus pneu...
P59407     82 LNLKEAKELAKFATDlGYPKLSAVTPFYYn-FTFEQIKDYYNEILKDv--dNKLLIYSIPalTGVALTTDQFAELfe--n 156 Lactobacillus plan...
Q92WP0     81 IATRDALRLSQHAAKsGYQAISAIPPFYYd-FSRPEVMAHYRELADVs--aLPLIVYNFParTSGFTLPELVELLsh--- 154 Sinorhizobium meli...
Q99WR1     84 LDLNEAIELGKYATElGYDALSAVTPFYYp-FTFEEIRDYYFDIIEAt--qNNMIIYAIPdlTGVNISIEQFSELfn--h 158 Staphylococcus aur...
NP_865456  95 NSLREAQELAKHAQQiGASAISATCPSYFkvASVQSLTLCMQELAAAap-eTPFYYYHIPvlTGSSIDMVEFLTHadeai 173 Pirellula sp. 1
AAR98793   83 LNVDEVEVMTKCAEKlEFDAISAITPYYYg-FSFEEVKQYYQKISEFs--sLPMFIYYLPqlAGSKLGIEQFGELlr--i 157 Mycoplasma alligat...
NP_975543  83 LNIYESIEQAKLAEQlGYDAISAVTPFYYk-FNLDQILNYYKEIKKSt--sLPLIAYYIPilSGVNFSLEAFEKLfa--i 157 Mycoplasma mycoide...
Feature 1           #                                          #                              
1FDZ_A    159 pGVGALKQTsgDLYQMEQIRREHp--dLVLYNGYDEIFASGLLAGadGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQ 236 Escherichia coli
1FDY_A    159 pGVGALKQTsgDLYQMEQIRREHp--dLVLYNGYDEIFASGLLAGadGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQ 236 Escherichia coli
NP_110396 167 pTFQGLKFSdtDLLDFGQCVDQNrqqqFAFLFGVDEQLLSALVMGatGAVGSTYNYLGKKTNQMLEAFEQKDFSLALNYQ 246 human
NP_345787 161 pRVIGVKNSsmPVQDIQMFVAAGge-dYIVFNGPDEQYLGGRLMGaeAGIGGTYGVMPDLFLKLESLIQERDLDTAKKLQ 239 Streptococcus pneu...
P59407    157 pKIIGIKYTnaDFYLLERVRNAFp--dKLILSGFDEMLLPALALNvdGCIGSTYNLNAPRVREEMDAFEAGDIDKARQLQ 234 Lactobacillus plan...
Q92WP0    155 pNIIGIKHTssDMFQLERIRHAVp--dAIVYNGYDEMCLAGFAMGaqGAIGTTYNFMGDLFVALRDCAAAGRIEEARRLQ 232 Sinorhizobium meli...
Q99WR1    159 eKIVGVKYTapNFFLLERIRKAFp--dKLILSGFDEMLVQATISGvdGAIGSTYNVNGRRARKIFDLARQGQIQEAYQLQ 236 Staphylococcus aur...
NP_865456 174 pTLVGLKYTdtMLFEFQRCLELSnr-kFDVVWGCDEMLLGATATGarAAIGSTYNLAAKIYRKMTLALASGQLETARQWQ 252 Pirellula sp. 1
AAR98793  158 kNVVGCKFGatDVYMFERLIAKYgk-qKVFMFAWDEALASGLLIGakGFIGSTYNVNALAVREMIDLFNAAKFDKLREKM 236 Mycoplasma alligat...
NP_975543 158 nGIIGVKFTatDLYTLERIKAKFp--dKLVFYGFDEQQLSASIYNidGVIGSTFNVNAKKAKKLFELIKNGQNQQALELQ 235 Mycoplasma mycoide...
Feature 1                                                                  
1FDZ_A    237 TECNKVIDLLIKTGv--FRGLKTVLHYMdvvSVPLCRKPFg----pVDEKYLPELKALAQQ 291 Escherichia coli
1FDY_A    237 TECNKVIDLLIKTGv--FRGLKTVLHYMdvvSVPLCRKPFg----pVDEKYLPELKALAQQ 291 Escherichia coli
NP_110396 247 FCIQRFINFVVKLGf-gVSQTKAIMTLVsgiPMGPPRLPLqkasreFTDSAEAKLKSLDFL 306 human
NP_345787 240 YAINEVIYKMISGKanmYAVAKEVLRLNeklDLGSVRQPLe----aLAEGDLEVAKQAAEL 296 Streptococcus pneumoniae TIGR4
P59407    235 NISNDMITDLIANDi--YPTLKLVMKHMg-vDAGYVKKPMs----hPTPEMEAGATAIYEK 288 Lactobacillus plantarum
Q92WP0    233 AMANRVIQVLIKVGv--MPGSKALLGIMg-lPGGPSRRPFr----kVEEADLAALREAVAP 286 Sinorhizobium meliloti
Q99WR1    237 HDSNDIIETVLSMGi--YPTLKEILRHRd-iDAGLPKRPFk----pFNEAHRQTLDQLIAK 290 Staphylococcus aureus subsp. aureus N315
NP_865456 253 SKSIEMICTIGRYPf--HPAMKAILAMQg-lDVGPCRLPLe----sLSQSQVESLRESLDA 306 Pirellula sp. 1
AAR98793  237 HVYNDYINAVVSKGl--MQTLKAIMRLEg-iEAGYNKLPFr----kIDEKELEEYAKFIKK 290 Mycoplasma alligatoris
NP_975543 236 KEINDFIEIVLANGl--YAILKEIIKQHydlNEVFCRLPMt----qVISQYALKAKEIKDK 290 Mycoplasma mycoides subsp. mycoides S...

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