Conserved Protein Domain Family
KDG_aldolase

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cd00953: KDG_aldolase 
KDG (2-keto-3-deoxygluconate) aldolases found in archaea
KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Statistics
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PSSM-Id: 188640
Aligned: 7 rows
Threshold Bit Score: 421.02
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative activecatalytic
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                 ##                                    
CAA11866      1 MPEIITPIITPFTKdNRIDKEKLKIHAENLIRkGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVtNKIIFQVGGLNLDD 80  Sulfolobus solfa...
ZP_00306831   3 KLDSITPVITPFTD-NKVDKDKAVKHGEDVIKgGMKYLFPGGTTGLGPSMASGEKLQLLDAYAHIpEHVILQVGSLNLEE 81  Ferroplasma acid...
NP_394091     1 MPFKIVPILTPFRG-NEIDGEKFKDHCLKLLRdGIDMIFVAGTNGMGPALSFQEKKMLAEYCSDItDRVIFQVGSLNLEE 79  Thermoplasma aci...
NP_378480     6 SMDIVTPILTPFTKeGKIDVEKLKAHAKFLIDnGIDLLFVNGTTGLGPALSKEEKLTTLKTIYDVtNKVIFQVGSLNIND 85  Sulfolobus tokod...
BAB59810      1 MKLKIVPVVTPFKE-GKIDGEKFIHHCMSLLSvGVNYVFISGTTGLGPSLSINERMDLIKLSSNFaDKAIMQVGSMNLED 79  Thermoplasma vol...
CAF18463     20 SMEIVAPVITTFRG-GRLDPELFANHVKNITSkGVDVVFVAGTTGLGPALSLQEKMELTDAATSAaRRVIVQVASLNADE 98  Thermoproteus tenax
YP_023804     1 MPLKIVPVITPFKN-NVLDMDILREHCERLLNsGIDKVFLAGTNGLGISLDFSEKLRIINELDIDgDKLIIQIGSLNLEK 79  Picrophilus torr...
Feature 1                                                        #                            # 
CAA11866     81 AIRLAKLSKDfDIVGIASYAPYYYpRMSEKHLVKYFKTLcevspHPVYLYNYPtaTGKDIDAKVAKEIg----CFTGVKD 156 Sulfolobus solfa...
ZP_00306831  82 SINLAREAKKyKIHAVAALPPYYFtGIKREWLIKYYTKIss--eYPTIIYNYPetTGYNITYDMVNDIkkaggDVIGIKE 159 Ferroplasma acid...
NP_394091    80 SIELARIARSmNFYAVAALPPFYFgGIPEEWIIRYYTQIse--vMETFIYNYPkfTGYDINADLARKIkkkggNILGVKD 157 Thermoplasma aci...
NP_378480    86 VIDLVKASKDfDIVGIASYPPFYFpRLPEKFLLKYFTTIanyspHSLYIYNYPlaTGYDISAKIVYQMk---dLITGLKD 162 Sulfolobus tokod...
BAB59810     80 SIKLARMAKEnGIYGISALPPYYFgGIPEEWLIKYYVEIsk--iIPTFIYNYPkfTGYDINSSLAIKInkaggNIIGVKD 157 Thermoplasma vol...
CAF18463     99 AIALAKYAESrGAEAVASLPPYYFpRLSERQIAKYFRDLcsavsIPVFLYNYPaaVGRDVDARAAKELg----CIRGVKD 174 Thermoproteus tenax
YP_023804    80 SMELARAARAkGYFAIASVPPYYYsDLDENAIIRYFLDLsr--hYKTIVYNYPkmTGHDVNARMLKRIidsggDIIGVKD 157 Picrophilus torr...
Feature 1                             # #                                                       
CAA11866    157 TieNIIHTLDYKRLnpNMLVYSGSDMLIATVASTGlDGNVAAGsNYLPEVTVTIKKlamerkideALKLQFLHDEVIEAS 236 Sulfolobus solfa...
ZP_00306831 160 TtfNMNDILNTKMYvpDFKVYTGPDQYILSAYRLGlDGFVSGAsNYGYKVINKIIEnhd---nkdGDRYQFLLNELADLS 236 Ferroplasma acid...
NP_394091   158 TvsDIDHMMRYKYLidDFMVFSGPSNYILHAAVNGlDGAVAAAgNYATEMFVQILDdta----ryGRANQIIIDEIFDAA 233 Thermoplasma aci...
NP_378480   163 TnqDLSHSLEYKILmpNLKVYNGSDSLVFYSLTSL-DGSVTAAsNYLPHVMKKMKEhitsgqvskAIELQKLINKALDIS 241 Sulfolobus tokod...
BAB59810    158 TiaDISHMLSYRDLgnDFIILSGPSNSIYEALRSGvDGSVAAAgNFMPKTFIELADkfe---aeaSFKLQKYINSVLSIA 234 Thermoplasma vol...
CAF18463    175 TneSLAHTLAYKRYlpQARVYNGSDSLVFASFAVRlDGVVASSaNYLPELLAGIRDavaagdierARSLQFLLDEIVESA 254 Thermoproteus tenax
YP_023804   158 TvnDIMHMLEYKNIedDLIVLAGPSTHIFSALRSGvDGTVSAAgNYMPNIFRYLSDhvy---snnAFKLQILINSVIDAS 234 Picrophilus torr...
Feature 1                                                    
CAA11866    237 RIFGSLSSNYVLTKYFQGYDLGYPRPPIFPLDDEEERQLIKKVEG 281 Sulfolobus solfataricus
ZP_00306831 237 RKYGTISSIYDMVEIMTGIDAGNPREPFFKLSKEERSSLEKEMNE 281 Ferroplasma acidarmanus
NP_394091   234 SRYGQWASNYSLVRILRGYDAGDPRPPFYPLDDHTEEKLRSEVRS 278 Thermoplasma acidophilum DSM 1728
NP_378480   242 RKYGQLSAIYYLVKEFLGYDVGYPRGPIFPLEEDEVKALLSEIQP 286 Sulfolobus tokodaii str. 7
BAB59810    235 NEYGSWSAYYSLIKILRRYSAGDSRAPFYPLNALDEEKLRHDVFF 279 Thermoplasma volcanium GSS1
CAF18463    255 RHIGYAAAVYELVEIFQGYEAGEPRGPVYPLDPEEKAWLRAAVAK 299 Thermoproteus tenax
YP_023804   235 AHFGIYSANYSLVKIIKNYYCGEPRPPFYPLTESDENNLKKIIKN 279 Picrophilus torridus DSM 9790

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