2OCC,1V54,6HU9


Conserved Protein Domain Family
CcO_VIc-like

?
cd00927: CcO_VIc-like 
Click on image for an interactive view with Cn3D
Cytochrome c oxidase subunit VIc-like
Cytochrome c oxidase subunit VIc-like proteins are subunits of the cytochrome c oxidase (CcO, also called complex IV or CIV), the terminal oxidase in the mitochondrial electron transport chain which drives oxidative phosphorylation. CcO is a multi-chain transmembrane protein complex located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 14 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 11 subunits are encoded within the nuclear genome. The VIc subunit-like proteins are single-pass membrane proteins found only in eukaryotes and their specific function remains unclear.
Statistics
?
PSSM-Id: 438621
Aligned: 6 rows
Threshold Bit Score: 67.0585
Created: 11-Apr-2003
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
 
oligomer
Conserved site includes 31 residues -Click on image for an interactive view with Cn3D
Feature 1:oligomer interface [polypeptide binding site]
Evidence:
  • Structure:2OCC; Bos taurus cytochrome c oxidase subunit VIc interacts with other subunits of the complex, contacts 4A
  • Structure:6HU9; Saccharomyces cerevisiae cytochrome c oxidase subunit VIIa, interacts with other subunits of the complex, contacts 4A
  • Comment:Mammalian subunit VIc interacts with subunits 1, 2, 4 and 5A. Fungal subunit VIIa interacts with the corresponding subunits.
  • Citation:PMID 9624044

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1       ## ## ### ### ### ### ### ### ##  ##  #  ##  #   #
2OCC_I        9 MRGLLARRLRFHIVGAFMVSLGFATfYKFAVAEKRKKaYADFYRNYDSMK 58  cow
1V54_I        9 MRGLLARRLRFHIVGAFMVSLGFATfYKFAVAEKRKKaYADFYRNYDSMK 58  cattle
6HU9_i        5 ITGTIKRRVIMDIVLGFSLGGVMASyWWWGFHMDKINkREKFYAELAERK 54  Saccharomyces cerevisiae S288C
P20610        5 LPKVVKSQLVQDIGVALILGSIAGCfFKYGVDKKKQReRVAFYEKYDKED 54  Dictyostelium discoideum
XP_004351023  5 LPGFIKTQILKDIGYGLVIGVIPGLyFKFGYVNKIQReREEYYAALDKQP 54  Cavenderia fasciculata
P20609        5 LPALIKMHITKDIGYGLLLGIIPGVwFKYQIGQSIQK-REDFYAAYDKRN 53  Dictyostelium discoideum

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap