1FJM,2IAE,3RL4,3RL3,3RL5,1SU1,2XMO,2KKN,2QJC,1Z2W,1XM7,3RQZ,2NXF,4PEF,1II7,3D03,1HO5,1QHW,2YEQ,1T71,3E0J,1UF3,1XZW


Conserved Protein Domain Family
MPP_superfamily

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cd00838: MPP_superfamily 
Click on image for an interactive view with Cn3D
metallophosphatase superfamily, metallophosphatase domain
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Statistics
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PSSM-Id: 277317
Aligned: 149 rows
Threshold Bit Score: 33.0094
Created: 1-Nov-2000
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitemetal binding
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1FJM_A; Oryctolagus cuniculus PP1 binds two Mn2+ ions and microcystin toxin. Two metal ions are positioned by a central beta-alpha-beta-alpha-beta scaffold at the active site.
  • Citation:PMID 7651533
  • Structure:2IAE_C; Homo sapiens PP2A binds two Mn2+ ions and microcystin toxin.
  • Structure:1HO5_A; Escherichia coli UshA binds two Mn2+ ions, phosphoric acid, and adenosine.
  • Comment:The UshA active site is located at the end of a cavity formed at the interface of its two domains. The C-terminal nucleotidase domain also contributes residues to the active site.
  • Citation:PMID 7770774

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            # #                                          #                              
1FJM_A        60 KICGDIHgqyydllrlf-----------------eyggfppesNYLFLGDYVDrgkqsleticll--------------- 107 Oryctolagus cun...
YP_001541739   7 LLISDLHgsetayrkla-----------------naikyykvdAVVFAGDLAGkvlvpvikvgdsyriplinedkllkps 69  Caldivirga maqu...
1Z2W_A        14 LVLGDLHiphrcnslpak--------------fkkllvpgkiqHILCTGNLCTkesydyl-------------------- 59  house mouse
YP_444480      4 LLFSDVHgdreacqrl-------------------vdraadvdVVVGAGDFCVarrnlqapie----------------- 47  Salinibacter ru...
YP_684622      4 LCFSDIHgnvaavkrlik---------------dvrarrarydAVVVAGDLTNfsvtrdqqesqeal------------- 55  uncultured meth...
NP_866637      6 LCFSDLHrdqeaakrl-------------------veladqadLVLGAGDFANrhegladtld----------------- 49  Rhodopirellula ...
YP_001540660   7 VLVSDLHgsgivygkia-----------------nlpkllktdLVVVAGDLTGkilvpivrkggeyvtnlfgevkvinsd 69  Caldivirga maqu...
NP_060764      9 LACGDVEgkfdilfnrvq---------------aiqkksgnfdLLLCVGNFFGstqdaeweeyk---------------- 57  human
YP_001612403   4 LCVSDIHghadalaavl-----------------ataerrgytQLLVAGDLCFpgpkpletw------------------ 48  Sorangium cellu...
3E0J_A       204 LLVSGLGlgggggesllgtqllvdvvtgqlgdegeqcsaahvsRVILAGNLLShstqsrdsinkakyltkktqaa----- 278 human
Feature 1                                                                              ##        
1FJM_A       108 ------------------------------------------------------laykikypenfFLlrGNHEcasinri 133 Oryctolagus cun...
YP_001541739  70 eaegkikelrgsgyhvriv-teeeyermrndkdylnkvfnetltndiveylniideryrqqgikmYIipGNDDpvdving 148 Caldivirga maqu...
1Z2W_A        60 ----------------------------------------------------------ktlagdvHIvrGDFDenlnype 81  house mouse
YP_444480     48 --------------------------------------------------------tlsaidtptVLvpGNAEtedelea 71  Salinibacter ru...
YP_684622     56 ---------------------------------------------------dtilqlltaefgnvMYvpGNRDylgrgkk 84  uncultured meth...
NP_866637     50 --------------------------------------------------------ilqsitrptVLvpGNGEtadelre 73  Rhodopirellula ...
YP_001540660  70 eqvktisktlrdngyypyvtdeeeynniandkdyfkkvllkvmeeyfrvdiskiennyrklgvklVYlaGNDDpkefvnk 149 Caldivirga maqu...
NP_060764     58 -------------------------------------------------------tgikkapiqtYVlgANNQetvkyfq 82  human
YP_001612403  49 ---------------------------------------------------------rrltqakaVCvqGVSDralatld 71  Sorangium cellu...
3E0J_A       279 --------------------------------------------sveavkmldeillqlsasvpvDVmpGEFDptnytlp 314 human
Feature 1                                                                                #       
1FJM_A       134 ygfydeckrrynik---------------------------------lwktftdcfnclpiaaivdekIFCCHgglspdl 180 Oryctolagus cun...
YP_001541739 149 vnsrqwssiipfdentvnlnshvlvglgy---snitpwrthrelseeemyerlsklmnkldkgeysrtILVVHvppygtv 225 Caldivirga maqu...
1Z2W_A        82 qk----------------------------------------------------------vvtvgqfkIGLIHghqvipw 103 house mouse
YP_444480     72 qidaagwgaahvlhgggttidgtpffg--------lgggvpvtpfgpwsydltedeartllsdcpegaVLVAHsppkdav 143 Salinibacter ru...
YP_684622     85 rlslthyk---------------------------------------------gmmieegkkyylgprLPITTtpelsdk 119 uncultured meth...
NP_866637     74 atanwqsaivlhgegceielhnstipvw------gvgggipvtpfgawsydfdedqatemlagcpegaILITHspaldtv 147 Rhodopirellula ...
YP_001540660 150 iyeeydndvlipidektmnindymflgfgy--snetpwhtarelpereieerliklfsglnrneldrtIAIIHvppygtt 227 Caldivirga maqu...
NP_060764     83 dadgcelaenitylgrkgiftgssglqivylsgteslnepvpgysfspkdvsslrmmlcttsqfkgvdILLTSpwpkcvg 162 human
YP_001612403  72 ldkvrarseherarldrlsqt-------------------rtelgelilarlarlaptyrlpledggeLVLVHgspadpl 132 Sorangium cellu...
3E0J_A       315 qqplhpcmfplat-----------------------------------aystlqlvtnpyqatidgvrFLGTSgqnvsdi 359 human
Feature 1                                                                           #            
1FJM_A       181 qsmeqirrimrptdvpdqgllcdllwsdpdkdvqgwgendrgvsftfgaevvakflhkhdldLICRAHQVvedgye---- 256 Oryctolagus cun...
YP_001541739 226 idqapmltsdfkvvrrg----------------------geavlthvgstsvkriieeykplMSLHGHIHesggvdai-- 281 Caldivirga maqu...
1Z2W_A       104 gdmas----------------------------------------------lallqrqfdvdILISGHTHkfeafe---- 133 house mouse
YP_444480    144 drdskgqsl--------------------------------------gsvavreaieahtprLTVCGHIHgsweeta--- 182 Salinibacter ru...
YP_684622    120 ntiliqhsnv-----------------------------------vyeggfkrrsvvckdalLHIVGHTHtgiv------ 158 uncultured meth...
NP_866637    148 dhdsagkir--------------------------------------gsqsirdailakkprFAVCGHIHsdwerqv--- 186 Rhodopirellula ...
YP_001540660 228 idqapkltndlkpvveg----------------------gvvamehvgstavrrilenfgplIGLHGHVHesygidfln- 284 Caldivirga maqu...
NP_060764    163 nfgnssgevdt---------------------------------kkcgsalvsslatglkprYHFAALEKtyyerlpyrn 209 human
YP_001612403 133 epishdmt----------------------------------------deevlsllgddpadVVICGGSHvpfdrm---- 168 Sorangium cellu...
3E0J_A       360 fryssmedhleilewtlrvrh--------------isptapdtlgcypfyktdpfifpecphVYFCGNTPsfgskiir-- 423 human
Feature 1                          
1FJM_A       257 -------ffakrqLVTLF 267 Oryctolagus cuniculus
YP_001541739 282 -----kvdgvkipVFNAG 294 Caldivirga maquilingensis IC-167
1Z2W_A       134 --------henkfYINPG 143 house mouse
YP_444480    183 -------hvgptpVHNAG 193 Salinibacter ruber DSM 13855
YP_684622    159 ----------sgnYLNTG 166 uncultured methanogenic archaeon RC-I
NP_866637    187 -------tlgatpILNAG 197 Rhodopirellula baltica SH 1
YP_001540660 285 ----akccnkkipVVNAG 298 Caldivirga maquilingensis IC-167
NP_060764    210 hiilqenaqhatrFIALA 227 human
YP_001612403 169 --------vggvrIINVG 178 Sorangium cellulosum 'So ce 56'
3E0J_A       424 -----gpedqtvlLVTVP 436 human

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