1D8C,1N8I


Conserved Protein Domain Family
malate_synt_G

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cd00728: malate_synt_G 
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Malate synthase G (MSG), monomeric enzyme present in some bacteria. In general, malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA. This reaction is part of the glyoxylate cycle, which allows certain organisms to derive their carbon requirements from two-carbon compounds, by bypassing the two carboxylation steps of the citric acid cycle.
Statistics
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PSSM-Id: 238370
Aligned: 10 rows
Threshold Bit Score: 1324.73
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active site
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1D8C; E.coli malate synthase G with bound Mg and glyoxylate

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       
1D8C_A        9 RLRIDANFKRFVDEEVLPgtGLDAAAFWRNFDEIVHDLAPENRQLLAERDRIQAALDEWHRSnpgpvkDKAAYKSFLREL 88  Escherichia coli
1N8I_A        9 NLRIARVLYDFVNNEALPgtDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRrviepiDMDAYRQFLTEI 88  Mycobacterium tu...
ZP_00033788  13 GLQVAANLDQFVETEALPgtGLDSAAFWSGFDALVHELAPKNRALLAERDRLQTELDNWHRAnpgpvrDLRAYRAFLEGI 92  Burkholderia fun...
BAB51267      9 GLRIAGELHDFVAGEALPgtGIAADAFWSGFSAIVHDLAPKNRALLKKRDAMQERLDGWYRDnga-pvDMEVYKSFLKEI 87  Mesorhizobium lo...
BAD75818      9 NIQVAKVLYDFVNEELLPnsGLDQDKFWSDFGALISDLTPRNKELLARRDEIQEKLNEWHKAhrg-rfDFNEYKAFLTDI 87  Geobacillus kaus...
AAZ25107      9 GYKVAGCLYNLVNHEVLPglNIHADDFWNSVAEVLAEFTPRNQQLLATRANLQAHIDVWHTDpanqpfNQQRYELFLKEI 88  Colwellia psychr...
AAZ28560      9 NLTVSQCLFDFIENEALPdtSISSSHFWQQFSSIIHDLSPENKQLLLKRDALQASINSYHQDnk--plDFSHYKKFLADI 86  Colwellia psychr...
ZP_01264319  13 NLSVSNKLLNFVNEELLKdtNISSEKFWEGFDQVVHELAPKNKELLKIREDLQKKIDDWHIAnkgneiNLEEYKKFLKEI 92  Candidatus Pelag...
ZP_00773816   9 QLQVAPQLAAFIEEQALPssEVAPTEFWAGFSNILAQLTPVNDALLAKRDLLQQKIDAYCQShp--tlEPASYKTFLQEI 86  Pseudoalteromona...
ZP_00570583   9 GLRVASELHQFVAEEALPgsGVDQAAFWAGATEIINDLTPRNRELLARRDELQQAVDDYHRRtpg-rpAQSDYAEFLTSI 87  Frankia sp. EAN1pec
Feature 1                                                                                       
1D8C_A       89 GYLVPQPERVTVETtgIDSEITSQAGPQLVVPAXNARYALNAANaRWGSLYDALYGSDIIPQega--xvsGYDPQRGEQV 166 Escherichia coli
1N8I_A       89 GYLLPEPDDFTITTsgVDAEITTTAGPQLVVPVLNARFALNAANaRWGSLYDALYGTDVIPEtdgaekgpTYNKVRGDKV 168 Mycobacterium tu...
ZP_00033788  93 GYIVPVPASVKATTdhVDTEIAEQAGPQLVVPLSNQRYALNAANaRWGSLYDALYGTDAIPEangaekqkAFNPVRGAAV 172 Burkholderia fun...
BAB51267     88 GYLVPEGPAFSVSTdnVDPEIAVVAGPQLVVPVMNARYALNAANaRWGSLYDALYGTDAIPEtggaekgkGFNPARGAKV 167 Mesorhizobium lo...
BAD75818     88 GYLEPEVEDFEITTdnVDDEIAVQAGPQLVVPLTNARYALNAANaRWGSLYDALYGTDAISEedgaergsSYNPVRGAKV 167 Geobacillus kaus...
AAZ25107     89 GYLVTEKADFTISTqnVDDEVALIAGPQLVVPLMNARFSLNAANaRWGSLYDALYGTDVIGDdngakqtkDFNPIRGRRV 168 Colwellia psychr...
AAZ28560     87 NYLVPQVDDFSINTsnVDNELALMAGPQLVVPIMNARFALNAVNaRWGSLYDALYGTDVISHengaqpgkTYNPVRGKKV 166 Colwellia psychr...
ZP_01264319  93 DYLKEVGPDFKIKTnnVDEEITSIAGPQLVVPIMNERYALNAANaRWMSLYDSLYGTDVIDQseds-atqRYDPLRGEMV 171 Candidatus Pelag...
ZP_00773816  87 GYLETPPADFSITTdnVDDEVATMAGPQLVVPINNARFALNAANaRWGSLYDAAYGTDVIPEdngatrtkAYNPARGQQV 166 Pseudoalteromona...
ZP_00570583  88 GYLLDEPAPFTITTdgVDDEIATQAGPQLVVPLLNARYAVNAANaRWGSLYDALYGSDVIDEtdgreragGYNPTRGAAV 167 Frankia sp. EAN1pec
Feature 1                                                                                       
1D8C_A      167 IAWVRRFLDESLPLEnGSYQDVVAFKVVDKQLRIQLKNgKETTLRTPAqFVGYRGDAaAPTCILLKNNGLHIELQIDAnG 246 Escherichia coli
1N8I_A      169 IAYARKFLDDSVPLSsGSFGDATGFTVQDGQLVVALPD-KSTGLANPGqFAGYTGAAeSPTSVLLINHGLHIEILIDPeS 247 Mycobacterium tu...
ZP_00033788 173 IAYARRFLDQAAPLAnGSHADATRYGVEGGKLVVTLKN-GTSELKTPAqFIGYQGEEsAPSAVLLKHNGLHFEIQIDAnD 251 Burkholderia fun...
BAB51267    168 IAWAKDFLDQSVPLTsGKWAGVNGLSVAHGALKLGAGA-GGTTLADPRqFAGYRGDAaNPDAVLLVKNGLHIEIVVDRnN 246 Mesorhizobium lo...
BAD75818    168 IAYGRQFLDEAVPLAqYSHKDAVQYAIVDGQLVVTTEGgATTGLKEPEkFVGFQGDPqHPTAVLLKNNGLHIEIQIDReH 247 Geobacillus kaus...
AAZ25107    169 QAYARRFLDETLPLTrGSHIDAVKYHIVKKAFTVTLFTgEQVQLKEAQqFVGYKGSTaAPSILLCRHNGLHIEIQIDKdN 248 Colwellia psychr...
AAZ28560    167 IAFAKGYLDQAIPLLtGNHSQAISYHLTEHQLMVSLADgQQSPLKDPSaFIGFTGSInKPDSLMFTHNGLHLNLLFSDdS 246 Colwellia psychr...
ZP_01264319 172 IKYGRDFLEKYFPLEnFEWHNITGFKIDNGSLTVLKDS-NKSSLKNKDkYIGHRGEAnDPSAIILKNNNLHIEIIIDPnA 250 Candidatus Pelag...
ZP_00773816 167 IQYARKWLDVIAPLTnGSHTTSQGYDITSGQLVVTLADaSTATLSHPTqLLGFVGDKnNPSAILLQHNGLHVELQFDRtH 246 Pseudoalteromona...
ZP_00570583 168 IARVREILDRSFPLTsGSHADATRYAVDADGLVVTVDG-AAVRLADPAlFVGFRGEGdEPTAVLLTHHGLHVEIQVDRnH 246 Frankia sp. EAN1pec
Feature 1                                                                                       
1D8C_A      247 RIGKDDpaHINDVIVEAAISTILDCEDSVAAVDAEDKILLYRNLLGLXQGTLQEKXEKNGRQIVRKLNDDRHYTAa-dGS 325 Escherichia coli
1N8I_A      248 QVGTTDraGVKDVILESAITTIMDFEDSVAAVDAADKVLGYRNWLGLNKGDLAAAVDKDGTAFLRVLNRDRNYTAp-gGG 326 Mycobacterium tu...
ZP_00033788 252 SIGKTDsaHVKDVVVEAAVSTIIDCEDSVAAVDADDKVQLYRNWLGLMNGDLTEEVTKNGKTFTRRLNADRVYTAangTA 331 Burkholderia fun...
BAB51267    247 QIGRTDpaGIADVILESALTTIQDCEDSVAAVDAQDKVVVYRNWLGLMKGDLAEEISKAGRSFVRKLNADRAYTAp-aGG 325 Mesorhizobium lo...
BAD75818    248 AVGKTDqaGVKDIVLEAAVTTIMDGEDSVAAVDAEDKVLVYRNLFGLVKGDLTATFEKNGKIMTRSLNPDRVYKTp-dGG 326 Geobacillus kaus...
AAZ25107    249 VVGKTDaaAVKDVVLESALSTIQDCEDSIAAVDASDKTSVYRNWLGLMKGDLAEIIQKGSRTITRTLNHDRNYLSp-dQK 327 Colwellia psychr...
AAZ28560    247 AIGKEDaaGLSDVVLESALTTIMDCEDSVAAVDGEDKVIAYRNWLGLMTGKLSAKLNKNGKTITRTMNNDLSVQTl-tGD 325 Colwellia psychr...
ZP_01264319 251 FSAQQDpaKISDIIVEAAVSTICDNEDSVAAVDADDKVICYRNWLGLMKGDLKSTFEKNGKTYERKLNPDRSYISk-dGK 329 Candidatus Pelag...
ZP_00773816 247 QIGQSDpcGMKDILVESALTTIMDCEDSVAAVDAEDKTLVYQNWLGLIKGTLEVSLSKPGGSSVRRLSADRNYTTl-tGK 325 Pseudoalteromona...
ZP_00570583 247 PVGAGDraGVSDVVVEAAVTTIMDLEDSVAAVDAADKVLGYRNWLQLMQRRLTAEVDKGGRTFTRVLAADREYTTa-dGG 325 Frankia sp. EAN1pec
Feature 1                   #                                                                   
1D8C_A      326 EISLHGRSLLFIRNVGHLXTIPVIWdsegnEIPEGILDGVXTGAIALYDLkv------qkNSRTGSVYIVKPKXhgPQEV 399 Escherichia coli
1N8I_A      327 QFTLPGRSLMFVRNVGHLMTNDAIVdtdgsEVFEGIMDALFTGLIAIHGLkasdvngpliNSRTGSIYIVKPKMhgPAEV 406 Mycobacterium tu...
ZP_00033788 332 PVVLHGRSLLFIRNVGHLMTNPAVLtkdghEIPEGILDAVITSLCALHDRkh------klNSRTGSIYIVKPKMhgPAEV 405 Burkholderia fun...
BAB51267    326 QITVPGRSLMLVRNVGHLMTNPAILdrdgnEVPEGIMDAALTALIALHDVgpeg---rraNSRAGSMYVVKPKMhgPEEV 402 Mesorhizobium lo...
BAD75818    327 ELVLPGRSLMFVRNVGHLMTNNAILhangeEVHEGIMDAVITSLIMKHSLignt---rylNSRKGSIYIVKPKMhgSAEV 403 Geobacillus kaus...
AAZ25107    328 EITLPGRSLQFIRNVGHLMTTNAIVtakneKVPEGIVDGLITSLISLHDLkgts---kfkNSKQGSIYIVKPKMhgPEEV 404 Colwellia psychr...
AAZ28560    326 TVTLKGRSLMFVRNVGHLMTNNAIIdsqgnEVPEGILDAMITSLIALHDLkgns---afsNSSEGSIYIVKPKMhgPEEV 402 Colwellia psychr...
ZP_01264319 330 GLKLHGRSLLLVRNVGHLMTNSAITlkdgsEIPEGIMDAFITSAACLHDIkk------kgNSRTGSIYIVKPKMhgPDET 403 Candidatus Pelag...
ZP_00773816 326 SFSLNGRSMMFVRNVGHLMTNDAILfq-gkPIYEGIMDAVITSLIAKHDLlgng---qyrNSKAGSIYIVKPKMhgSEEV 401 Pseudoalteromona...
ZP_00570583 326 TVTLPGRSMLLIRQVGLLMTTDAVLdrdgrPVPEGILDALVTGLGSVHDLrgdt---aggNSRTGSAYVVKPKMhgPDEV 402 Frankia sp. EAN1pec
Feature 1                                  #                         # #                        
1D8C_A      400 AFANKLFTRIETXLGXAPNTLKXGIXDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEXHSVXEAGPXLRKNQXKST 479 Escherichia coli
1N8I_A      407 AFTCELFSRVEDVLGLPQNTMKIGIMDEERRTTVNLKACIKAAADRVVFINTGFLDRTGDEIHTSMEAGPMVRKGTMKSQ 486 Mycobacterium tu...
ZP_00033788 406 AFASELFARVEDLLKLPRNTIKMGIMDEERRTSVNLLACINEARERVAFINTGFLDRTGDEMHTAMEAGPMLRKGDMKSS 485 Burkholderia fun...
BAB51267    403 AFAVEIFDRVEALLGMPRNTIKMGIMDEERRTTVNLKEAIRAARERVVFINTGFLDRTGDEIHTSMEAGPMIRKGDMKQA 482 Mesorhizobium lo...
BAD75818    404 AFANELFDRVEDMLGLERNTIKIGVMDEERRTSLNLKNCIYQVRDRIIFINTGFLDRTGDEIHTSMEAGPMLRKNEMKSS 483 Geobacillus kaus...
AAZ25107    405 AFSHDLFSAIERHLGLAQNTIKMGIMDEERRTSANLKECIRAAQTRLAFINTGFLDRTGDEIHTSMHAGAMAQKALMKDE 484 Colwellia psychr...
AAZ28560    403 AFANTLFSRVETALSLPQNTVKMGIMDEERRTSVNLKNCIFAAKDRVVFINTGFLDRTGDEIHTSMMAGPMARKADIKLT 482 Colwellia psychr...
ZP_01264319 404 SFTDLIFTKVEEVLGLEKYTCKIGIMDEERRTSSNLKECIRTLQNRVFFINTGFLDRTGDEMHTSMEAGPMIKKGDMKSS 483 Candidatus Pelag...
ZP_00773816 402 AFADTLFSQVEDALALPKNTLKMGIMDEERRTSVNLKACINAAKARAVFINTGFLDRTGDEIHTSMHLGPFALKADIKQQ 481 Pseudoalteromona...
ZP_00570583 403 AFTVELMSRVERLLQLPPATIKLGIMDEERRTSVNLRRCVYEARDRVVFINTGFLDRTGDEIHTSMLAGPMVRKAAMREA 482 Frankia sp. EAN1pec
Feature 1                                                                                       
1D8C_A      480 PWIKAYERNNVLSGLFCGLrGKAQIGKGXWAXPDLXADXYSQKGDQLRAGANTAWVPSPTAATLHALHYHQTNVQSVQAN 559 Escherichia coli
1N8I_A      487 PWILAYEDHNVDAGLAAGFsGRAQVGKGMWTMTELMADMVETKIAQPRAGASTAWVPSPTAATLHALHYHQVDVAAVQQG 566 Mycobacterium tu...
ZP_00033788 486 AWIAAYERSNVLVGLSAGLrGRSQIGKGMWAMPDLMHAMLEQKIAHPKAGANTAWVPSPTAATLHALHYHQVDVQAVQQE 565 Burkholderia fun...
BAB51267    483 AWISAYEAWNVDTGLECGLaGHAQIGKGMWAMPDLMAAMLEQKIAHPKAGANTAWVPSPTAATLHATHYHKVDVHAVQAA 562 Mesorhizobium lo...
BAD75818    484 TWLQAYEKSNVAVGLAAGFrGRAQIGKGMWAMPDLMAEMLKQKGAQLKAGANTAWVPSPTAATLHALHYHQVNVSAVQSE 563 Geobacillus kaus...
AAZ25107    485 PWITAYENRNVRIGLQAGLqGKAQIGKGMWAIPDQMSEMVKSKIAHPKSGANCAWVPSPTAATLHVMHYHKVNVQEIQSA 564 Colwellia psychr...
AAZ28560    483 PWIGAYEDNNVDVGLACGFsQKAQIGKGMWPIPDQMANMIATKINHVEAGANTAWVPSPTAATLHSLHYHRVNVFELQKQ 562 Colwellia psychr...
ZP_01264319 484 KWIGAYENNNVDIGLQCGLsGKAQIGKGMWAMPDKMKEMMEQKTGHLNAGANCAWVPSPTAAALHALHYHEINIFEKQKE 563 Candidatus Pelag...
ZP_00773816 482 PWLTAYELANVKIGVDAGMsGKAQIGKGMWPIPDNMADMMQSKTNHPQSGANTAWVPSPTAATLHALHYHQIDVFSLRNP 561 Pseudoalteromona...
ZP_00570583 483 TWIRVYEDNNVDAGLALGFpGRAQIGKGMWAAPDNLADMMTQKIGHPLAGASCAWVPSPTAAALHALHYHEVSVADRQRE 562 Frankia sp. EAN1pec
Feature 1                                                                               #       
1D8C_A      560 IaqtefnaefeplLDDLLTIPVAenan-wsaQEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIHNVALXEDRATLRIS 638 Escherichia coli
1N8I_A      567 Lagkr-----ratIEQLLTIPLAkela-wapDEIREEVDNNCQSILGYVVRWVDQGVGCSKVPDIHDVALMEDRATLRIS 640 Mycobacterium tu...
ZP_00033788 566 LertdyakvrdelLDGLLTIPVVaeak-wsdDEIRSEIDNNAQGILGYVVRWIDQGVGCSKVPDIHNVGLMEDRATLRIS 644 Burkholderia fun...
BAB51267    563 Lksrp-----kakLDDILSVPVAvrpn-wtpDEIQRELDNNAQGILGYVVRWIDQGVGCSKVPDINDVGLMEDRATLRIS 636 Mesorhizobium lo...
BAD75818    564 Landr-----ndyRDDMLQIPVVdhpq-wtaEEIQEELDNNCQSILGYVVRWIDQGIGCSKVPDIHNVGLMEDRATLRIS 637 Geobacillus kaus...
AAZ25107    565 MqaefslpgtiddLSELLTIPLLknqtelstAAIQKELDNNIQGLLGYVVRWVNQGIGCSKVPDIDNIARMEDRATLRIS 644 Colwellia psychr...
AAZ28560    563 Lakrq-----panIDDILTIPLAehtn-wteQEISDELDNNCQGILGYVVRWIDDGVGCSKVPDINNVGLMEDRATLRIS 636 Colwellia psychr...
ZP_01264319 564 Iqkre-----sakLDDLLTIPVAdrpn-wsmEEINSEISNSAQTLLGYVVRWIDHGVGCSKVPDINNVGLMEDRATLRIS 637 Candidatus Pelag...
ZP_00773816 562 Iasnd-----fdgLDDILTVPLLadcsslsqQDIQHELDNNVQGILGYVVRWVHQGIGCSKVPDINNVGLMEDRATLRIS 636 Pseudoalteromona...
ZP_00570583 563 Lagrr-----padRLELLTVPLAepaaawspEEVAAEVDNNVQGVLGYVVRWVELGIGCSKVPDLTGTPLMEDRATCRIS 637 Frankia sp. EAN1pec
Feature 1                                                                                       
1D8C_A      639 SQHIANWLRHGILtkEQVQASLENXAKVVDQQNAG--------DPAYRPXAGNfanSCAFKAASDLIFLGVKQPNGYTEP 710 Escherichia coli
1N8I_A      641 SQLLANWLRHGVItsADVRASLERMAPLVDRQNAG--------DVAYRPMAPNfddSIAFLAAQELILSGAQQPNGYTEP 712 Mycobacterium tu...
ZP_00033788 645 SQHIANWLYHGVVkrELVEETFRRMARVVDEQNAG--------DPLYKPMAPGf-dTIAFKAAQALVFEGRQQPSGYTEP 715 Burkholderia fun...
BAB51267    637 SQHIANWLRHKVCseIQVRDSLQRMAAIVDRQNVG--------DPLYRPMAPDfdkSIAFQAACDLVFKGTSQPNGYTEP 708 Mesorhizobium lo...
BAD75818    638 SQILANWLHHGICtkEQVLETLKRMAKVVDEQNAG--------DPNYRPMAPNyddSVAFQAACDLIFRGYEQPNGYTEP 709 Geobacillus kaus...
AAZ25107    645 SQHVCNWLHHGVIsdSQVLESLQRMAEVVDQQNAA--------DSSYIAIGTDfgeSIAFKAAKDLIFQGKEQPSGYTEP 716 Colwellia psychr...
AAZ28560    637 SQHIANWLTHNICtiEQVQASLEKMANIVDKQNAS--------DSSYQAMSNDftnSIAFKAAAALIFSGVEQPNGYTEP 708 Colwellia psychr...
ZP_01264319 638 SQHIANWIHHDICtkSQVMEVMKKMAKIVDDQNKNdgaytrsgRGSYEMMSENfdqSIAFKTACDLIFKGKEQPSGYTEP 717 Candidatus Pelag...
ZP_00773816 637 SQHIANWLLHGLIneAQINDSMLRMAQLVDAQNSS--------DKEYIPMMPDpikSIAFQAAQELILQGTQQPNGYTEP 708 Pseudoalteromona...
ZP_00570583 638 SQHVANWLRHGIVsrEQVEESLRRMAALVDAQNAG--------EPGYRPMAPAf-eELAFAAARALLLEGADQPNGYTEP 708 Frankia sp. EAN1pec
Feature 1                 
1D8C_A      711 LLHAWRLREK 720 Escherichia coli
1N8I_A      713 ILHRRRREFK 722 Mycobacterium tuberculosis
ZP_00033788 716 LLHKFRLEVK 725 Burkholderia fungorum
BAB51267    709 VLHARRLELK 718 Mesorhizobium loti MAFF303099
BAD75818    710 ILHRRRQEAK 719 Geobacillus kaustophilus HTA426
AAZ25107    717 LLHQRRQEVK 726 Colwellia psychrerythraea 34H
AAZ28560    709 LLHQYRLEKK 718 Colwellia psychrerythraea 34H
ZP_01264319 718 LLHLNRLIKK 727 Candidatus Pelagibacter ubique HTCC1002
ZP_00773816 709 VLHAKRREMK 718 Pseudoalteromonas atlantica T6c
ZP_00570583 709 LLHEHRRAQK 718 Frankia sp. EAN1pec

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