1FUI,2AJT


Conserved Protein Domain Family
L-fuc_L-ara-isomerases

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cd00578: L-fuc_L-ara-isomerases 
Click on image for an interactive view with Cn3D
L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins. FucIase converts L-fucose, an aldohexose, to its ketose form, which prepares it for aldol cleavage (similar to the isomerization of glucose in glycolysis). L-fucose (or 6-deoxy-L-galactose) is found in various oligo- and polysaccharides in mammals, bacteria and plants. AI catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion to D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Statistics
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PSSM-Id: 238323
Aligned: 45 rows
Threshold Bit Score: 249.119
Created: 7-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:Mn binding site [ion binding site]
Evidence:
  • Structure:1FUI_A; E.coli L-fucose isomerase binds Mn2+; L-fucitol and water serve as additional ligands to Mn2+.
  • Citation:PMID 9367760

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       
1FUI_A        7 PKIGIRPVIDgrrmgvrESLEEQTMNMAKATAALLTeklrhacgaaVECVISDtci------agmAEAAACEEKFSSq-- 78  Escherichia coli
NP_349217     7 LKLGIVAVSRd------CFPMELSENRRKAVVDAYNge-------iFECLTTVen---------eKDMRKALKEVKSa-- 62  Clostridium acet...
NP_228759     4 MTFGLIVGNRe------FFPDRLVEEGRERVIKVLEgm-------gYRVVTLSpsdtklgavetaKDAKKCAELFKEkag 70  Thermotoga marit...
NP_406777     8 LIFAVIIGNRg------FFPSYLVSDARRDAQALFDrl-------gINIIMLNeeqtplggvenwHDAKVCAELFRQhse 74  Yersinia pestis ...
ZP_00233717   4 IKIGFAPTRRs------IFSAPDAIKYANLTRNKLNel-------nIEFVDITefnedg-llyddADVMKIAAKFKKa-- 67  Listeria monocyt...
NP_965119    10 IKIGFAPTRRn------IFSATAAIEFANKTREKLDel-------gVNYVDIKevnddg-llyddDGLEKITEKFKKa-- 73  Lactobacillus jo...
ZP_01131269  18 TRIGLVAGGLaaywpqfPALLPQLQESSKYVTDRFTal-------dAEVVDVGfis-------daQEATVAAEKLRRa-- 81  marine actinobac...
ZP_01353210  13 VRIGLYSAGLhvyweqfEGLKGCLLEYNLFLEKRMLe--------fGEVYNFGlvd-------teDKGREAGGYFNKy-- 75  Clostridium phyt...
NP_811821     6 VRVGLLGVGLdtywgqfEGLLPRLLTYQDEIAAKIEam-------dVQVINTGmvd-------spLKANECVLQLKQa-- 69  Bacteroides thet...
ZP_01450318   1 MKTGLFSIGLdtywpqfDGLLDNLNGYHYHISNKLQgm-------gANLVDAGmvd-------tpEKAQEAAKLFKTe-- 64  alpha proteobact...
Feature 1                                                                                       
1FUI_A       79 nVGLTITVTPCWCYGSEtidm----dptRPKAIWGFNgt----------------------erPGAVYLAAALAAHSQKG 132 Escherichia coli
NP_349217    63 gVNALVVYLGNFGPETPetlia--kefdGPVMFAAAAeergdn--------------lvngrgDAYCGMLNASYNLALRN 126 Clostridium acet...
NP_228759    71 eIDGIIVTLPNFGDEKGvaqairlsglnVPVLVHAFPddpekl--------------dlqnrrDSFCGKISVSNNLKQYG 136 Thermotoga marit...
NP_406777    75 eIHGVVVILPNFGDEKSvsdairlsglkVPVLVQAEEdaldkm--------------glatrrDSFCGKISLCNNLRQYG 140 Yersinia pestis ...
ZP_00233717  68 gIQGLFLPHTNFGTEYVcarla--kelgVPVLLWGPRderpde--------------ngmrlrDTQCGLFATGKILRRFQ 131 Listeria monocyt...
NP_965119    74 kIDGLFIANENFGTEYEvarla--aklnVPVLLWGPKdeapap--------------dgsrrrDTQCGLFAIGKVLRHFN 137 Lactobacillus jo...
ZP_01131269  82 dCDLIVIFLTTYLTASMvlpia--qrakTPVLVIDLQpteamdhan--------fdtgkwlayCGQCPVPEVANVFKRAG 151 marine actinobac...
ZP_01353210  76 nVDIVFSHAATYYTSACllplh--qinkAPVIVLNLQptpemayes--------tgtdrwlaqCVGCSIPEISNAFNRAG 145 Clostridium phyt...
NP_811821    70 dVELVFLFISTYALSSTilpva--qqvgKPIIILNIQpasaidyqklnsmgdrgrmtgewlahCQACSVPEFASVLNRAG 147 Bacteroides thet...
ZP_01450318  65 dVDIIFLFISTYALSSTvlpvv--qkakVPVVMLNIQpvaqldyekfnamgdkgkmtgywlehCQSCSLPELACVFNRSG 142 alpha proteobact...
Feature 1                                                                                       
1FUI_A      133 IPAFSIYGHDvqdadd-----------tsipadVEEKLLRFARAGLAVASMKGKSYLSLGGVSMGIAg-SIVDHNFFESW 200 Escherichia coli
NP_349217   127 INAYIPEYPVgta------------------sdVANMINEFVPVATALIGLKNLKIISFGPRPQDFLacNAPIKQLYNLG 188 Clostridium acet...
NP_228759   137 IEFSLTTLHTedpe----------------sevFKRDIEKFAAVCRIVKGMRNIKVGAIGARPSAFNtvRFSEKILERMS 200 Thermotoga marit...
NP_406777   141 IPFTLTKQHVcsln----------------seiFSRDVEQFVQLCRVVHAMKRVRVGAIGARPTNFNtvRYSEKLLENLG 204 Yersinia pestis ...
ZP_00233717 132 VPFTYMTNCRlsd------------------peFERGIRDFIAVCNTVKTFQNMRILQIGPRPFDFWt-TMCNEGELLEK 192 Listeria monocyt...
NP_965119   138 VPFTYIKNSDidd------------------paFSRGMIDFIKVCNVVKTFKNTRILQIGTRPFDFWs-VIVNEGELLEK 198 Lactobacillus jo...
ZP_01131269 152 IEFRSVSGHLkd-------------------erAWARINRWVNAAKVRATLRHARHGLMGHVYPGMLd-VSTDLTLVSSQ 211 marine actinobac...
ZP_01353210 146 IKFRAINGLLgldytpkfakademtsnrpeaikAWSEIKEWCQAATVKRTLQYARFGFLGGYYSGMLd-MYSDFTMLQAQ 224 Clostridium phyt...
NP_811821   148 VRYDIITGYLse-------------------dyVWEEIASWVDAVRVMYGMRTSRLGVLGHYYCGMLd-VYTDLMKQSAV 207 Bacteroides thet...
ZP_01450318 143 IDYHVVSGYMqe-------------------dyVWQEINNWVDAARVAEGMRNNRVGILGHYYNGMLd-VYSDLTQQSAT 202 alpha proteobact...
Feature 1                                                                                       
1FUI_A      201 L-GMKVQAVDM-TELRRRIDQKi-yDEAELEMALAWadknfrygedennkqyqrnaeqsrAVLRESLLMAMCIRDMMqgn 277 Escherichia coli
NP_349217   189 VeIEENSELDL-FASFNEHENDs--RIPDVVKDMEEelgeg---------------nkmpGILPKLAQYELTLLDWAeeh 250 Clostridium acet...
NP_228759   201 IsVETVDLSEIlHRVSNLKDDDe--RVRRKLEEIKKnyrlq---------------ivpeEKILLMAKFGSVIDEWIe-- 261 Thermotoga marit...
NP_406777   205 ItVETLDLSEVfFRVANLSDNDi--RVGEKLALLKAngdts---------------tipqDKLHKMAKLFVVISEWIi-- 265 Yersinia pestis ...
ZP_00233717 193 F-NVQLAPIPL-PELMKEIRSVsseQIEEVDGTVEYchgcai-------------vkikeVDLRMVAALKVAMKNLAt-- 255 Listeria monocyt...
NP_965119   199 F-GIQLSPIPL-GELTSYMYELidkKDSRIEETKETyrnwad-------------ikikdEDFTKVAALKLAMQDKMk-- 261 Lactobacillus jo...
ZP_01131269 212 F-GSHVEVLEF-DDLRVRVDEV---TDAQVTERMNLarklftl-----------desvreEDFAWGAKVSVGLDRLVd-- 273 marine actinobac...
ZP_01353210 225 T-GIHIEILEM-CDMDAYLQKV---TEEEVKEKLGQienffeisgds--psdpiakrptvEQLAWSAKVASAQEKMVl-- 295 Clostridium phyt...
NP_811821   208 F-GTHIELLEM-CELKAYREEV---SDGELKRKLDEfydkfnv-----------eascssEELVRAARTSVALDKLVn-- 269 Bacteroides thet...
ZP_01450318 203 F-GNHFEILEM-CELFDLRQAV---TEQEIETKVDEfkqkfdv-----------seeceiSEIRRAAQTSVALDKLIk-- 264 alpha proteobact...
Feature 1                                                                       #               
1FUI_A      278 skladigrveeslgYNAIAAGFQg----QRHWTdq-yPNGDTAEAILNSSfdwngvrepFVVATENDSLNGVAMLMGHQL 352 Escherichia coli
NP_349217   251 -----------kgsREYVVFANKc----WPAFQtqfgCVPCYVNSRLTARg--------IPVSCEVDIYGALSEYIGTCV 307 Clostridium acet...
NP_228759   262 -------------eNDIKALAIQc----WTSLEwnlgITPCTIMSLLNEKg--------KPAACEVDITGALSMYVLQLA 316 Thermotoga marit...
NP_406777   266 -------------aNDIDTTAMQc----WTSLQqnlgINVCSIMSVMSGQl--------MPSACEVDVMGALSMYALASC 320 Yersinia pestis ...
ZP_00233717 256 -------------kYGCSAIAIQc----WTALQdeigIMPCAANAMLIDEg--------IPVVCETDIHGAISCLLIEAA 310 Listeria monocyt...
NP_965119   262 -------------eYGCNAGTIQc----WTELQreigILPYASEALLQTEg--------MPVTCETDINGAISELLAESA 316 Lactobacillus jo...
ZP_01131269 274 -------------dFDLDSAAYYhr-glNGELHerlgAGMILGSSLLTARg--------IPFVGEYELRTSLAMLAAHTI 331 marine actinobac...
ZP_01353210 296 -------------dRNLDCISYYyh--gRDNYYesiqSGFIVGHSLLTAQg--------IACAGEGDIKTALAMKISDIL 352 Clostridium phyt...
NP_811821   270 -------------vHQLGAMAYYyegfcGNDYEni-vTSVIAGNTLLTGYg--------IPVAGECEVKNAQAMKIMSLL 327 Bacteroides thet...
ZP_01450318 265 -------------kHNLGSMAYYye--gSGEYEni-vTSVIAGNTLLTGAn--------TPIAGECEIKNVQAMKIMDLF 320 alpha proteobact...
Feature 1                 #                                                                     
1FUI_A      353 Tgt--aQVFADVRTYWSpeaiervtghkldglaehGIIHLINSgsAALDGSckqrdsegnptmkphweisqqeadaclaa 430 Escherichia coli
NP_349217   308 Sqd--vVTLLDINNTVPkdmyeseik-skfnytlkDTFMGFHCgnTAACKLtsgtmknq--------------mimaral 370 Clostridium acet...
NP_228759   317 Sgq--pSAIVDWNNNYRd----------------eNETILFHCgnFPASIYe---------------------------e 351 Thermotoga marit...
NP_406777   321 Sla--pASIADWNNNFGae---------------rDKCVLFHCgnFASESLesstmgt----------------adiigt 367 Yersinia pestis ...
ZP_00233717 311 NlgrnkSFFADWTVRHPdn---------------eNGELLQHCglFPFSVAk---------------------------d 348 Listeria monocyt...
NP_965119   317 TlgderAIFADVNCRHPen---------------eNGELLQHLgtFAFQTAk---------------------------n 354 Lactobacillus jo...
ZP_01131269 332 Ga---gGSFTEIQALNFf----------------dDVVEMGHDgpAHLAVSe---------------------------r 365 marine actinobac...
ZP_01353210 353 Dk---gGSYCEIVAADFn----------------rDTMILGHDgpFHFAISk---------------------------g 386 Clostridium phyt...
NP_811821   328 Ka---gGSFSEFYAMDFk----------------dDIVLLGHDgpAHFAIAeek-----------------------vkl 365 Bacteroides thet...
ZP_01450318 321 Gv---gGSFSEFYLSDFk----------------dDVVYLGHDgpAHFAIAegs-----------------------vgl 358 alpha proteobact...
Feature 1                                                                                       
1FUI_A      431 TEWCPaihe-----yfrgGGYSSRFLTEGgVPFTMTRVNIIkg-lGPVLQIAEGWSVElpkdvhdilnkrtnsTWPTTWF 504 Escherichia coli
NP_349217   371 EPNQEpn----------iTRGTLEGDIVP-GEITFFRLQSNad-sELTAYVAEGEVLPvkt----------rsFGSIGVF 428 Clostridium acet...
NP_228759   352 KPEIKyadvigttvgkerAYGACAGKIKT-SPFTFLRLTTDdnegKVKAYVGEGQILDenp----------ktFGSRGVA 420 Thermotoga marit...
NP_406777   368 TVGCEn------------TCGAVHGRMKS-GPLTYFRLSSDdftgQVRAYVGEGRSVSdel----------ntVGCRAVV 424 Yersinia pestis ...
ZP_00233717 349 KPAIGypl-------afdSPGAVEAEAKG-GELTLCRFDGDn--gEYSLLLGKARGIEgp-----------ytKGTYLWI 407 Listeria monocyt...
NP_965119   355 RPILPpshf------vfdYPGSAAFEAKD-GTYTLVRFDGDh--gKYSMLIGNAKTCDgp-----------yeQGTYAWF 414 Lactobacillus jo...
ZP_01131269 366 DPLLRglgvy---hgkrgYGVSVEFDVQQ-GPVTTFGIGQDrd-gSYTFITSEGTVTPgpl---------leiGNTTSRV 431 marine actinobac...
ZP_01353210 387 KPILRgmgvy---hgkrgTGVSVEAKVQP-GPVTTLGVTQTnd-gKLKFNISEGEAIEapi---------llnGNTSTHI 452 Clostridium phyt...
NP_811821   366 VPLPLyhg-------kpgKGLSIQMSVKP-GDVTLLSVCEGr--dGVFLLAAEGEAVQget---------lhiGNTNSRY 426 Bacteroides thet...
ZP_01450318 359 VPLPIyhg-------kpgQGLSIQMTVKH-GPVTVLSVVTRrd-gSVFLQVCEGESVPgpv---------lqiGNTNSRY 420 alpha proteobact...
Feature 1                                  #                         
1FUI_A      505 APrltgkgpftDVYSVMANw----GANHGVLTIGhvg-adFITLASMLRIPVC 552 Escherichia coli
NP_349217   429 AIpqm---grfYRHVLIENr----FPHHGAVAFGhfg-kaIYNLFRYLGVKEV 473 Clostridium acetobutylicum ATCC 824
NP_228759   421 RIe--------KLQELMKYicengFEHHVAINLSrvadavKEALEKYLGIVVH 465 Thermotoga maritima MSB8
NP_406777   425 EVp--------QLESLLTHicnngFEHHVAMNHSataqvlQEAFSKYLGVDCY 469 Yersinia pestis CO92
ZP_00233717 408 EVd--------NLKRLEEKivsgpYIHHVSGIHAdvv-piLYETCKYIGIKPD 451 Listeria monocytogenes str. 1/2a F6854
NP_965119   415 QFk--------DLNRFEAKyvygpYIHHMAGVRAdvv-piLAEACKYINVSPD 458 Lactobacillus johnsonii NCC 533
ZP_01131269 432 SFg-------gDPGEWVDEwsqtgIGHHWALCVGhva-gdIHAAASLLGIEHR 476 marine actinobacterium PHSC20C1
ZP_01353210 453 RFa-------dKPAEYMDKwfeeaPTHHLALSVGhnk-nlFIKTAQLLNIPYG 497 Clostridium phytofermentans ISDg
NP_811821   427 RFp-------cGARRFMDQwskagPSHHCAIGIGhkv-seLKKLAFLLDIPII 471 Bacteroides thetaiotaomicron VPI-5482
ZP_01450318 421 KFp-------mGAREFMNEwsrggPSHHCAIGVGhis-nkLEKLADILGIKVR 465 alpha proteobacterium HTCC2255

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