1QLM


Conserved Protein Domain Family
MCH

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cd00545: MCH 
Click on image for an interactive view with Cn3D
Methenyltetrahydromethanopterin (methenyl-H4MPT) cyclohydrolase (MCH). MCH is a cytoplasmic enzyme that has been identified in methanogenic archaea, sulfate- reducing archaea, and methylotrophic bacteria. It catalyzes the reversible formation of N(5), N(10)-methenyltetrahydromethanopterin (methenyl-H4MPT+) from N(5)-formyltetrahydromethanopterin (formyl- H4MPT), in the third step of the reaction to reduce CO2 to CH4. The protein functions as a homodimer or homotrimer, depending on the organism.
Statistics
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PSSM-Id: 238305
Aligned: 11 rows
Threshold Bit Score: 380.902
Created: 7-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:trimer interface I [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                  #   #              #            #    
1QLM_A        3 SVNENALPLVERMIERAELLNVEVQELEnGTTVIDCGVEAAGGFEAGLLFSEVCMGGLATVELTEFEHD--GLCLPAVQV 80  Methanopyrus kan...
O85014        9 SLNALAGPLVESLVADAAKLRLIVAQEN-GARTVDAGANARGSIEAGRRIAEICLGGLGTVTIAPIGPV--ASWPYTVVV 85  Methylobacterium...
O28344        3 SVNEIAAEIVEDMLDYEEELRIESKKLEnGAIVVDCGVNVPGSYDAGIMYTQVCMGGLADVDIVVDTIN--DVPFAFVTE 80  Archaeoglobus fu...
Q59030        3 SVNKKALEIVNKMIENKEEINIDVIKLEnGATVLDCGVNVPGSWKAGKLFTKICLGGLAHVGISLSPCEckGITLPYVKI 82  Methanocaldococc...
P51616        3 SVNIEAKKIVDRMIEGADDLKISVDKLEnGSTVIDCGVNVDGSIKAGELYTAVCLGGLADVGISIPGDLseRFALPSVKI 82  Methanothermobac...
Q9RQ04       13 SVNQLTNPLVKHLVDNAKALRLLVEKLPsGATIIDAGIKAEGGLEAGRLIAEICMGGLGHVNLHSSSTF--PHWPWTLSV 90  Methylobacillus ...
P94919        3 SVNEMGSNVIEEMLDWSEDLKTEVLKLNnGATVIDCGVKAEGGYEAGMYLARLCLADLADLKYTTFDLN--GLKWPAIQV 80  Methanosarcina b...
Q9RPW8        6 SVNAHSQPIVKYLITYADKLRLQIDRLPnGCTVIDAGIKVPGSLEAGRLIGEICMGGLGRITLTHTDTF--TKWPLTVNV 83  Methylococcus ca...
Q9RQ01       25 SLATCVAPLVEALIRDADALRLKVSRGPrDALIVDAGITAAGGLEAGRRIAEICLGGLGRVALVPTGRF--SPWDTLASV 102 Xanthobacter aut...
ZP_00034544  26 SVNALSERLVSRLVDDAARFGAAVSHAQnGTVLVDAGVMAPGSVAAGVLIARICMGGLGHVTVRENLDAq-PLWPSMIEV 104 Burkholderia fun...
Q9HPD7        3 SLNRMALELADEALEFTEELDIGAFELDtGTTVIDFGVEHDGGLEAGLLLAELQTAGLATVQTRVDTVG--DATFPHVEV 80  Halobacterium sp...
Feature 1                                                                                       
1QLM_A       81 TTDHPAVSTLAAQKAGWQVQVG-------DYFAMGSGPARALALKp--------KETYEEIDYEDDADVAILCLESSELP 145 Methanopyrus kan...
O85014       86 HSADPVLACLGSQYAGWSLADEeg---dsGFFALGSGPGRAVAVV---------EELYKELGYRDNATTTALVLESGSAP 153 Methylobacterium...
O28344       81 YTDHPAIACLGSQKAGWQIKVD-------KYFAMGSGPARALALKp--------KKTYERIEYEDDADVAVIALEANQLP 145 Archaeoglobus fu...
Q59030       83 KTSHPAIATLGAQKAGWAVKVG-------KYFAMGSGPARALAKKp--------KKTYEEIGYEDDADVAVLCLEASKLP 147 Methanocaldococc...
P51616       83 KTDFPAISTLGAQKAGWSVSVG-------DFFALGSGPARALALKp--------AETYEEIGYQDEADIAVLTLEADKLP 147 Methanothermobac...
Q9RQ04       91 HSNNPVLSCLGSQYAGWSLSHE-------KFFSLGSGPGRALAGR---------EELYKELGYKDSADAAVLVLESDKVP 154 Methylobacillus ...
P94919       81 ATDNPVIACMASQYAGWRISVG-------NYFGMGSGPARALGLKp--------KELYEEIGYEDDFEAAVLVMESDKLP 145 Methanosarcina b...
Q9RPW8       84 HTSNPVIACLGSQYAGWSLSHGeg---kdGFYALGSGPARAMATKikdgneepvEELYKELNYRDKHTETAIVMEVDKVP 160 Methylococcus ca...
Q9RQ01      103 STSGPVLACLGSQYAGWSLAAG-------DFFALGSGPGRAIAAV---------ETLYGELGYRDRGEKVVLVLETAVVP 166 Xanthobacter aut...
ZP_00034544 105 RTSWPVLACLGSQYAGWSLSATkeqtggkKFFSLGSGPARALAVK---------EPLFAELGYRDTHERGVLVLEVDRLP 175 Burkholderia fun...
Q9HPD7       81 ACDQPAVAMLGAQKAGWELAVD-------DYEALGSGPARALVAT---------EGEFQAIDYVDAFEFAVLTLESTGLP 144 Halobacterium sp...
Feature 1                                  ##                                        #          
1QLM_A      146 DEDVAEHVADECGVDPENLYLLVAPTASIVGSVQVSARVVETGLYKLLEVLeYDVTRVKYATGTAPIAPVADDDGEAMGR 225 Methanopyrus kan...
O85014      154 PASVVNKVAAATGLAPENVTFIYAPTQSLAGSTQVVARVLEVALHKAHTVG-FDLHKILDGIGSAPLSPPHPDFIQAMGR 232 Methylobacterium...
O28344      146 DEKVMEFIAKECDVDPENVYALVAPTASIVGSVQISGRIVETAIFKMNEIG-YDPKLIVSGAGRCPISPILENDLKAMGS 224 Archaeoglobus fu...
Q59030      148 NEEVAEYVAKECGVEVENVYLLVAPTASLVGSIQISGRVVENGTYKMLEVLeFDVNKVKYAAGLAPIAPIIGDDFAMMGA 227 Methanocaldococc...
P51616      148 GEDVTDKIAEECDVSPENVYVLVAPTSSLVGSIQISGRVVENGTYKMLEALhFDVNKVKYAAGIAPIAPVDPDSLKAMGK 227 Methanothermobac...
Q9RQ04      155 PQEVIEKVARDTGVNPENLTFILTPTRSLAGTVQIVARVLEVALHKIHTLH-FPLEHVVDGAASAPLPPPAPDFLIGMGR 233 Methylobacillus ...
P94919      146 DEKVVEFIAKHCSVDPENVMIAVAPTASIAGSVQISARVVETGIHKFESVG-FDINCIKSGYGVAPIAPVVGKDVQCMGS 224 Methanosarcina b...
Q9RPW8      161 PVEVTDKIARACKLDPSHLTVILTPTSSLAGGMQVVARVLEVALHKAHALH-FPLENIIDGTGCAPVPPPHPNFIKAMGR 239 Methylococcus ca...
Q9RQ01      167 PAEVVDEIAARCAVAPSDITLILTPTSSLAGTVQIVARVLEVALHKAHALH-FPLEHIADGVGSAPICPPSPDFLTAMGR 245 Xanthobacter aut...
ZP_00034544 176 PQVVIDKVLHDCGLAPERLTLVTTPTHSVAGTVQVVARVVEVALHKTHVLG-VALDEVVEGGGSAPLPPPAPDGIQAMGR 254 Burkholderia fun...
Q9HPD7      145 TTAAASEVAARAGVTEESVFLPTYRTASVAGSVSAAARTVELAVFRLYELG-YDPTDVLSASGCAPVAPVAGDEQTAIGR 223 Halobacterium sp...
Feature 1                                                                                       
1QLM_A      226 TNDCILYGGTVYLYVegddel---pevveeLPSEASEDYGKPFMKIFEEADYDFYKIDPGVFAPARVVVNDLsTGKTYTA 302 Methanopyrus kan...
O85014      233 TNDAIIYGGRVQLFVdaddada--kqlaeqIPSTTSADHGAPFAEIFSRVNGDFYKIDGALFSPAEAIVTSVkTGKSFRG 310 Methylobacterium...
O28344      225 TNDSMMYYGSVFLTVkkyde------ilknVPSCTSRDYGKPFYEIFKAANYDFYKIDPNLFAPAQIAVNDLeTGKTYVH 298 Archaeoglobus fu...
Q59030      228 TNDMVLYGGITYYYIksdendd-ieslckaLPSCASKDYGKPFMEVFKAADYDFYKIDKGMFAPAVVVINDMtTGKVYRA 306 Methanocaldococc...
P51616      228 TNDAVLFGGRTYYYIeseegdd-ikslaenLPSSASEGYGKPFYDVFKEADYDFYKIDKGMFAPAEVVINDLrTGEVFRA 306 Methanothermobac...
Q9RQ04      234 TNDAILFGGHAHIFVkgsdeaa--aklakeLPSSASRDYGRPFAEVFKAVNMDFYKIDPMLFSPAAVTVTAVeSGKSFIG 311 Methylobacillus ...
P94919      225 TNDCVIYCGETNYTVrfdgelaeleefvkkVPSTTSQDFGKPFYQTFKEANFDFFKVDAGMFAPARLTVNDLnSTKTISS 304 Methanosarcina b...
Q9RPW8      240 TNDAILFGGRVHLFVkgsdeaa--etlaneLPSSVSRDYGKPFAEVFKEYKYDFFKVDAMLFSPASVIVTTVdSGRSFHA 317 Methylococcus ca...
Q9RQ01      246 TNDAVLYGGDVHLFVhgpaeaa--kdlatrLPSLASRDYGRPFGEIFAGYDCDFYKVDPLLFSPARVTVTAIdHGESFTA 323 Xanthobacter aut...
ZP_00034544 255 TNDAILYGGRVHLTVkhdava---rrlaaeLPASTSRDYGRPFADIFTSFNYDFYQIDPALFAPAEVWVSSLeSGATYHG 331 Burkholderia fun...
Q9HPD7      224 TNDALAHGGRVHLTVaedfd------afdaVVSSAAARYDDPFAEVVGTDDWDAGDVDNGVFGPAQLTVDVV-GGPTHAF 296 Halobacterium sp...
Feature 1                   
1QLM_A      303 GEINVDVLKESF 314 Methanopyrus kandleri
O85014      311 GRLEPQLVDASF 322 Methylobacterium extorquens
O28344      299 GKLNAEVLFQSY 310 Archaeoglobus fulgidus
Q59030      307 GKVNAEVLKKSL 318 Methanocaldococcus jannaschii
P51616      307 GFVNEELLMKSF 318 Methanothermobacter marburgensis str. Marburg
Q9RQ04      312 GKLDATLLDQSF 323 Methylobacillus flagellatus
P94919      305 GGLYPEILLQSF 316 Methanosarcina barkeri
Q9RPW8      318 GEVDVELLERSF 329 Methylococcus capsulatus
Q9RQ01      324 GGFDPILIARSF 335 Xanthobacter autotrophicus
ZP_00034544 332 GRVDTALLHDQW 343 Burkholderia fungorum
Q9HPD7      297 GTVREDVLADGF 308 Halobacterium sp. NRC-1

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