1JJ2


Conserved Protein Domain Family
Ribosomal_L19e

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cd00481: Ribosomal_L19e 
Click on image for an interactive view with Cn3D
Ribosomal protein L19e. L19e is found in the large ribosomal subunit of eukaryotes and archaea. L19e is distinct from the ribosomal subunit L19, which is found in prokaryotes. It consists of two small globular domains connected by an extended segment. It is located toward the surface of the large subunit, with one exposed end involved in forming the intersubunit bridge with the small subunit. The other exposed end is involved in forming the translocon binding site, along with L22, L23, L24, L29, and L31e subunits.
Statistics
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PSSM-Id: 238268
Aligned: 34 rows
Threshold Bit Score: 138.501
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:putative intersubunit bridge
Evidence:
  • Structure:1JJ2_O: bridge residues
  • Comment:L19 participates in forming the bridge between large and small subunits in the ribosome

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       
1JJ2_O        3 LSAQKRLAADVLDVGKNRVWFNPe--RQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAKG-HQKGAGS 79  Haloarcula maris...
O59437        4 LKMQRRIAAELLKCGENRVWIDPe--KVDEVASAITREDIRRLIKEGVIRKKPIEGQSRYRARIRHEQKKKG-RHRGPGS 80  Pyrococcus horik...
NP_394709     3 SDSVKRIVADIKGVGTSRVYIDTn--KVDRVMEAATRQDVIALMKQDVIKIKQKKGISNGRLKKRIKQLSKD-RRRGPGS 79  Thermoplasma aci...
O26129        3 LTTQKRLAADILKVGVNRIWIDPe--RIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKG-RRRGPGS 79  Methanothermobac...
Q9YF93        3 YRFQRRLAAEILGVGESRIWISPdpeLREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKG-RRRGMGR 81  Aeropyrum pernix
ZP_00306694   3 MSSVKEISADELKVGISRVWIDTn--NLDRVLDATSREDIKKLIGLNIIQRRDKKNHSNQRLKKRINQLTKG-RRRGPGS 79  Ferroplasma acid...
P54043        6 VSVQRRMAAEILKCGIERVWIDPt--QLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKG-RRRGPGS 82  Methanocaldococc...
NP_613318     3 LRPQRRMAAEILKCGVHRIWIDPe--RLEEVARAQTREDIRRLIKEGAIRKKPIKGQSRVRARKRHEQRKKG-RQRGPGR 79  Methanopyrus kan...
Q9UX89        4 LKAQKRLAASIAGVGINRIKVVEd--YIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKsEGKKSGS 81  Sulfolobus solfa...
NP_963666     3 VSTQRRMAAEILKVGLDRVWIDPn--HLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRARELHEKKKKG-RRRGPGS 79  Nanoarchaeum equ...
Feature 1                                      ## #####                   ##########
1JJ2_O       80 RKGkagaRQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDANHGD 147 Haloarcula marismortui
O59437       81 RKGkktaRMGKKELWIKTIRALRRELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQLYLFLEEHGLL 148 Pyrococcus horikoshii
NP_394709    80 LRGtkyaRYPRKDRWIDTIRALRDELRTLKSEGKITKETYRKYYRFIKSGSIRSRSQLLSHLKSAGLV 147 Thermoplasma acidophilum DSM...
O26129       80 IKGakgaRRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSKSYMKTYARDHDML 147 Methanothermobacter thermaut...
Q9YF93       82 RKGvataRLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRDLASLKRYMADRGLV 149 Aeropyrum pernix
ZP_00306694  80 VRGtkyaRYPRKRRWITTIRALRDELKTLKEKESIDKTTYRKYYRTIKSGSFSSRAQLVSHLKTESLI 147 Ferroplasma acidarmanus
P54043       83 RRGaagaRTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMREHELL 150 Methanocaldococcus jannaschii
NP_613318    80 RKGakgaRMPKKRAWIQRIRPIRRKLRELRDSGKIDRSTYRKLYMMAKGGYFRDTSHLLAYIEENDLW 147 Methanopyrus kandleri AV19
Q9UX89       82 RKGkkgaRANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYKGVSDVRNVLIQMGKI 149 Sulfolobus solfataricus
NP_963666    80 RKGkrtaRADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFKSRSHLLLYLKQKGIM 147 Nanoarchaeum equitans Kin4-M

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