1H0S,1GQO,1GU1,1UQR,2C57


Conserved Protein Domain Family
DHQase_II

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cd00466: DHQase_II 
Click on image for an interactive view with Cn3D
Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Statistics
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PSSM-Id: 238262
Aligned: 89 rows
Threshold Bit Score: 137.182
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:The active site resides at the interface between two QHQase monomers in a trimer. Residues from two monomers contribute to one active site. There are three active sites in a trimer and 12 in the DHQase dodecamer. Unfolding and refolding studies show that the trimer is the minimum catalytic unit of the enzyme.
  • Structure:2C57_ABC; Helicobacter pylori type II DHQase trimer binds three 2,3-anhydro-quinic acid molecules; defined at 3.5A contacts
  • Structure:1GU1; Streptomyces coelicolor type II DHQase dodecamer binds twelve 2,3-anydro-quinic acid molecules; defined at 3.5A contacts

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #    #                                                     # ##  
1H0S_A        4 IVNVINGPNLGRLGRREpAVYGGTTHDELVALIEREaae--lgLKAVVRQSDSEAQLLDWIHQaad-aaePVILNAGGLT 80  Mycobacterium tu...
2C57_A       15 KILVIQGPNLNMLGHRDpRLYGMVTLDQIHEIMQTFvkqgnldVELEFFQTNFEGEIIDKIQEsvgsdyeGIIINPGAFS 94  Helicobacter pylori
Q9WYI4        2 KVLVVNGPNLNMLGKRDkNIYGNFSHEDLVKMIEDWgrk--ngVEVEVFQSNHEGKILDRLHRld---fdGLVINPGAFT 76  Thermotoga maritima
AAK17115      9 NVLIINGPNINFLKKRE-KIYSKISFKKLKKKILKYsk---niINIKFYNSNCEGKIINFIQKnin--fnYIIINPGAYS 82  Candidatus Carso...
Q8XMI6        2 KIMVINGPNLNLLGIREkEIYGAKDFNQVIDYIKEEgke--lgLEVNCFQSNIEGEIINFIHNayfekydGIIINPGAYT 79  Clostridium perf...
Q8RAE4        3 RVLVIHGPNVNLTGKREkEVYGEITFEEINNMIKREaak--ldIAVKIQQSNSEGEIINLIHSaen-nfdAIIINPAAYT 79  Thermoanaerobact...
Q8RH64        2 KIMVINGPNLNMLGIREkNIYGTFSYDDLCKYIKDYpeykdknIEFEFLQSNVEGEIVNFIQEayskkydGIILNAGGYT 81  Fusobacterium nu...
Q9PJ53        2 KIMIIQGPNVNMLGVREvGIYGAMKMEEIHEQMKLAasq--nnVELDFFQSNFEGEIVDKIQEclg-tvdGIIINAAGYT 78  Campylobacter je...
NP_782201     5 NILIINGPNLNLLGIREkNIYGSTTLEDMNSTIMKNfde--dlVKINFYQSNIEGEIVSKIGDapk-eynGIVINPAAYS 81  Clostridium teta...
ZP_00884920   3 KILVINGPNLNLLGIREkDIYGSTNYNKLLEIISKKane--lnLNTLFFQSNHEGEIIDRIHKaldenidGIIINPGAYT 80  Caldicellulosiru...
Feature 1       #      #            ###        #                               
1H0S_A       81 HTSVALRDACAElsaPLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEH 143 Mycobacterium tuberculosis
2C57_A       95 HTSIAIADAIMLagkPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNI 157 Helicobacter pylori
Q9WYI4       77 HYSYAIRDALEIvkvPKVEVHISNIHRREEFRRRSVTAEVCDGQISGLGVYGYLLALEYIKKK 139 Thermotoga maritima
AAK17115     83 HYSIALLDCIKIfkgKIIELHISNIYNREYYRKNSIISLNSNVVISGMKENGYFHAINYILSL 145 Candidatus Carsonella ruddii
Q8XMI6       80 HYSIAIYDALKGveiPTVEVHLSNIHKREEFRHKSVTAPACIGQISGFGEYGYIMAMNALKNH 142 Clostridium perfringens
Q8RAE4       80 HYSLAIMDAIASvsvPVIEVHISNIFGREEFRKVSVTASRCKGVITGFGPYSYILALYAVKFL 142 Thermoanaerobacter tengcongensis
Q8RH64       82 HTSVAIHDAIKAvsiPTVEVHISNIHAREDFRKVCVTSPACIGQITGLGKLGYILAVVYLIEY 144 Fusobacterium nucleatum subsp. nu...
Q9PJ53       79 HTSVAIRDAIAAvalPTIEVHISNVYRREEFRQKSLIAPVCSGTIVGFGPFGYHLALMGIIQI 141 Campylobacter jejuni
NP_782201    82 HYSIAILDAIKSiniPVVEVHISNIYKREEYRRKSVTGEGCIGVISGFGYYGYIMAINYLLKN 144 Clostridium tetani E88
ZP_00884920  81 HYSYAIHDAIKAvniPTIEVHISNIYAREEFRKRSVIAPACVGQISGFGIKSYIIALYALKEI 143 Caldicellulosiruptor saccharolyti...

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