1EF2,1E9Y,4UBP,2FVH


Conserved Protein Domain Family
Urease_gamma

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cd00390: Urease_gamma 
Click on image for an interactive view with Cn3D
Urease gamma-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, archaea, fungi and plants. Their primary role is to allow the use of external and internally-generated urea as a nitrogen source. The enzyme consists of three subunits, alpha, beta and gamma, which can exist as separate proteins or can be fused on a single protein chain. The alpha-beta-gamma heterotrimer forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Statistics
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PSSM-Id: 238229
Aligned: 33 rows
Threshold Bit Score: 97.2695
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
alpha-gammabeta-gamma
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:alpha-gamma subunit interface [polypeptide binding site]
Evidence:
  • Structure:4UBP; Interface between Bacillus pasteurii Urease gamma (4UBP_A) and alpha (4UBP_C) subunits; defined at 3.5A contacts
  • Structure:1E9Y; Interface between Helicobacter pylori Urease gamma (N-terminal domain of 1E9Y_A) and alpha (1E9Y_B) subunits; defined at 3.5A contacts

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            ##        #   #       ###      #                               #    #    # 
1EF2_C        4 TPREKDKLLLFTAALVAERRLARGLKLNYPESVALISAFIMEGARDGk-sVASLMEEGRHVLTREQVMEGVPEMIPDIQV 82  Klebsiella aerog...
4UBP_A        5 NPAEKEKLQIFLASELLLRRKARGLKLNYPEAVAIITSFIMEGARDGk-tVAMLMEEGKHVLTRDDVMEGVPEMIDDIQA 83  Sporosarcina pas...
BAB78715      4 EQREAEKLALHNAGFLAQKRLARGLRLNYTEAVALIAAQILEFVRDGdrtVTDLMDLGKQLLGRRQVLPAVPHLLETVQV 83  Oryza sativa (in...
ZP_00859649   5 SPTEMDRLVIFNAAQMARRNRSLGIKLSHPEAVAYITDEVMTAARRNl-pYAEIRDMAGRLLTTDDVEPGVAQMIPMLYV 83  Bradyrhizobium s...
ZP_01195382   4 TPKDEDRLLLFLAAELARKHRSAGLALSYAEARALIADEVVEAARAGa-sVAGAAAHGATVLTDDDVLPGVRSLLGSVQV 82  Mycobacterium fl...
NP_176922     4 LPREIEKLELHQAGFLAQKRLARGIRLNYTEAVALIATQILEFIRDGdksVAELMDIGRQLLGRRQVLPAVLHLLYTVQV 83  thale cress
XP_762192     4 LPRERDKLLLHHAGSLAQKRLARGVRLNQTEATALIATVLQERIRDGehsVAELMQHGKTLLGRCHVLPGVPELLHEVMV 83  Ustilago maydis 521
CAE76567      4 IPKELDKLAISQLGFLAQRRLARGIKLNHSEATALIANNLQELIRDGnhtVADLMALGATMLGRRHVLPEVTSTLHEIQV 83  Neurospora crassa
AAC62257      4 LPRETDKLILTTLGTLAQRRLARGLILNRAETIALISSQLQEFVRDGrhsVAELMDLGKKMLGRRHVRKGVPESIHTIQV 83  Cryptococcus neo...
EAM73174     32 TPTERDRLLIFTAAELARARRARGLRLNVPEATALIADTVCEVARDGg-rLAEAMAAGRAVLGAEDVLPGVPDVVTQVDV 110 Kineococcus radi...
Feature 1       #                
1EF2_C       83 EATFPDGSKLVTVHNPI 99  Klebsiella aerogenes
4UBP_A       84 EATFPDGTKLVTVHNPI 100 Sporosarcina pasteurii
BAB78715     84 EGTFMDGTKLITVHDPI 100 Oryza sativa (indica cultivar-group)
ZP_00859649  84 ELMFAEGTKVMALFEPI 100 Bradyrhizobium sp. BTAi1
ZP_01195382  83 EAFFADGQKLVTVHDAI 99  Mycobacterium flavescens PYR-GCK
NP_176922    84 EGTFRDGTKLVTVHEPI 100 thale cress
XP_762192    84 EGTFSDGSFLVTVHQPV 100 Ustilago maydis 521
CAE76567     84 EGTFPSGTYLVTVHNPI 100 Neurospora crassa
AAC62257     84 EGTFPDGVFLVTVDDPI 100 Cryptococcus neoformans var. grubii
EAM73174    111 EAVFDDGTRLVVVPDPF 127 Kineococcus radiotolerans SRS30216

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