1SOX,1OGP,1SOX,1XDY


Conserved Protein Domain Family
SO_family_Moco

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cd00321: SO_family_Moco 
Click on image for an interactive view with Cn3D
Sulfite oxidase (SO) family, molybdopterin binding domain. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). SO catalyzes the terminal reaction in the oxidative degradation of the sulfur-containing amino acids cysteine and methionine. Assimilatory NRs catalyze the reduction of nitrate to nitrite which is subsequently converted to NH4+ by nitrite reductase. Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate.
Statistics
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PSSM-Id: 238198
Aligned: 104 rows
Threshold Bit Score: 103.033
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Moco bindingmetal
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:Moco binding site
Evidence:
  • Structure:1SOX; chicken liver sulfite oxidase
  • Citation:PMID 9428520

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       # # #                                              #                            
1SOX_A      136 FTRNHlpvpa--vepsSYRLRVDGpggGTLSLSlAELRsrfpKHEVTATLQCagnrrsemsrvrpvkglpwdigAISTAR 213 chicken
NP_253569    95 FYPAYnvpe---idlpEYRLQVSGrvrDKRPWSlEQLRrl-pQASQVTQLICie-------------------gWSAIGQ 151 Pseudomonas aeru...
BAB74643     77 IVNSFrstpi--idvdKYRLIVDGevnHPLNISmAEIQnl-pLTSMIIRHVCve-------------------gWAAIVQ 134 Nostoc sp. PCC 7120
NP_617932    49 QQRNNaikgtqyidreSYRLQVDGlveNPRNFTyEEITel-pQTSKVVDLNCve-------------------gWSFTAK 108 Methanosarcina a...
BAC45770     97 AYYDLddape--vsaaDWKLEVRGlvdNKKSWTlDELYkl-pQVTQITRHICve-------------------gWSAIGS 154 Bradyrhizobium j...
BAC74335     29 YSVTSsvph---kgeaNYRLTIDGlvdHPTSFTlADLRal-pQTRLVRDVQCvt------------------gwRVPGTP 86  Streptomyces ave...
BAC89094     74 LINTAedfpp-qidpgSYRLTVGGlveKPVSLTlKEIRkl-pYRSEIIRHVCve-------------------gWAAIVQ 132 Gloeobacter viol...
NP_960431   490 EYKELean-----dfkDWRLKVYGlveHPMEFSlEDLMal-pYHEQISQHFCiq-------------------aWSGVAK 544 Mycobacterium av...
ZP_00147365  38 EQRNNaikgtqriiedTYLLKVDGivdEPLDLTyEQITsy-pNVSKLIDLNCve-------------------gWDFTGK 97  Methanococcoides...
ZP_00362523 102 AYYNEsevrq--ieesSYRLEVTGlvaDKRKWAlPELRam-pQVDQVTRHICve-------------------gWSAIGK 159 Polaromonas sp. ...
Feature 1                                                 #                              #    # 
1SOX_A      214 WGGARLRDVLLHAGfpeelqgewHVCFEGldad----pggaPYGASIPYGRAlspaaDVLLAYEMNGTELPRDHGFPVRV 289 chicken
NP_253569   152 WSGVPLRTFLELVGadt---sakYVGFKCa----------dRYYSSLDMPSAlh--pQTLLALEMSGQALPEENGYPLRL 216 Pseudomonas aeru...
BAB74643    135 WGGVQLREIIALAQpke---nvqYVYFKSa----------dGYYESWDIASAlh--pQTLLAYEKNGESLPIDNGAPLRL 199 Nostoc sp. PCC 7120
NP_617932   109 WTGVKIAEIFEEVGame---natTVIFYS------------ADGYSTSLDKDyllesDIILAYKLNDVTLPPERGFPLQL 173 Methanosarcina a...
BAC45770    155 WTGTPLRDFLKLIGadt---rakYVWFQCad--------kdGYNSPLDMRSAlh--pQTQMTFKYANEILPRAYGFPMKI 221 Bradyrhizobium j...
BAC74335     87 FEGVRLSRLLDAAGvrs---sarAVRFTCfd---------gAYTESLTLAQArr--aDVLVALRMQDKPLGHNHGGPVRL 152 Streptomyces ave...
BAC89094    133 WGGLPLVELLKFVQpkp---earYVFFRSaegfrnnngelyGFYETWDLASCvh--pQTVMAYEKNFKPLPVINGAPVRL 207 Gloeobacter viol...
NP_960431   545 WGGVQMKTIMDIVKplp---eakWAVFYSmglg----atggIYYNAHHIGQMdh--hMTMLAYKMNDQQLPYMHGRPLRL 615 Mycobacterium av...
ZP_00147365  98 WTGVPVSTLLNEAGvqe---gatTVIFYSa----------dGYSTSLNLDYLie--nDIILAYRLNAVTLPQDRGFPLQL 162 Methanococcoides...
ZP_00362523 160 WGGVPFASFLRRVGadl---takYVGFKCa----------dDYFTSIDMPTAlh--pQTVLALTYDGQPLPPKYGFPMKL 224 Polaromonas sp. ...
Feature 1             #  # ##         
1SOX_A      290 VVPGVVGARSVKWLRRVAVSPD 311 chicken
NP_253569   217 RIPTKLGFKNAKHVVEIFVSNS 238 Pseudomonas aeruginosa PAO1
BAB74643    200 AAPIKLGYKQSKWVTQITLASH 221 Nostoc sp. PCC 7120
NP_617932   174 VAEDKYGYKWAKWIVKIELSDS 195 Methanosarcina acetivorans C2A
BAC45770    222 RVPTKLGFKNPKYVISMEVTND 243 Bradyrhizobium japonicum USDA 110
BAC74335    153 YVAPMYFYKSAKWLSGITVTED 174 Streptomyces avermitilis MA-4680
BAC89094    208 ASPIKLGYKQIKWVTEIMLLAA 229 Gloeobacter violaceus PCC 7421
NP_960431   616 RNELQHGFKLVKWIKGIEFVAD 637 Mycobacterium avium subsp. paratuberculosis str. k10
ZP_00147365 163 VAESKYGYKWAKWITGIEVINE 184 Methanococcoides burtonii DSM 6242
ZP_00362523 225 RMPTKLGYKNPKHIQAIFVTNT 246 Polaromonas sp. JS666

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