Conserved Protein Domain Family
arch_SelU_Nterm
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TIGR04568: arch_SelU_Nterm 
selenouridine synthase, SelU N-terminal-like subunit
This protein is involved in biosynthesis of a selenonucleotide, probably 2-selenouridine, in tRNA of some archaea, such as Methanococcus maripaludis. This protein resembles the N-terminal region of bacterial SelU, and its partner protein resembles the C-terminal region. [Protein synthesis, tRNA and rRNA base modification]
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Statistics
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PSSM-Id: 275361
Aligned: 3 rows
Threshold Bit Score: 345.292
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_010869544   1 MDEGILARLITFTEDVVLCIVLNDGRKMITNGKKILAGKIEGELASFILSASKEFLedkKVGVKKFKDYDIYFERIDINK 80  Methanocaldococ...
WP_011973640   1 MDEEILSRLLTFKNTVILAIQLKTGKKLITDGNKILAGKISGELASFILNKSKTIE---FPTTLKYKDELIYFEPIDIKK 77  Methanococcus a...
WP_011170844   1 MDENILSRLLTFKNDVILVIRLKTGEKVILKNGKIAAGKLTGQIASFISESSKNIT---KPSVLEFSDEMFYFEPVNIKK 77  Methanococcus m...

WP_010869544  81 FLKSIGGEFVKNTITVSELLELIKkEDVIIVDTRSPREFKEETLPGAINIPLFLDDEHALIGKTYKQESREKAIEIATDI 160 Methanocaldococ...
WP_011973640  78 YLGSIGKELLDEVITLSDFEEMDK-SNVVIVDARAPREYAKKTIPNAINVPIFLDDEHETIGKTYKQEGRDKAMNLASEI 156 Methanococcus a...
WP_011170844  78 YLGSIGSELSDDVITIDQFFKLNF-EDIIIVDARSPREFSEKTIPDAVNIPLFLTQEYETIGKLYKHEGKEVAVAKAGVI 156 Methanococcus m...

WP_010869544 161 VEKSLKRILNEAKKLDRDKLIVVFCARGGMRSQTMALILQLLGFKVKRLIGGFKAFKHA 219 Methanocaldococcus jannaschii
WP_011973640 157 IGESIKRITQNAIKIDNNKTIVVFCARGGMRSQAMATIFKLLGFKVKRLIGGFKGYNLT 215 Methanococcus aeolicus
WP_011170844 157 IQDGIKRIVSESLKLDPNKNLVVFCARGGMRSQSIATILKLLGFKVKRLVGGFKSYNIS 215 Methanococcus maripaludis
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