Conserved Protein Domain Family
OMP_myx_plus

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TIGR04565: OMP_myx_plus 
outer membrane beta-barrel protein
Members of this family are outer membrane beta-barrel proteins, as inferred by distant homologies to other families (e.g. pfam13505) and by the concentration of aromatic residues, especially Phe, in the OMP signal region, which is flush with the C-terminus in some members, but followed by a few residues in others. Members have variable insertions and deletions, affecting scores, so this model does not cleanly separate all members from all non-members. Members are common in the Myxococcales, with five occurring in Myxococcus xanthus DK 1622.
Statistics
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PSSM-Id: 275358
Aligned: 65 rows
Threshold Bit Score: 84.2729
Created: 10-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015350116     53 VGLPLQTHLTAHYFFDAGLAYNVFNTLAVEARVGY-AASRHTGLARSISES----FLAREDKRvtdeledlwQMNFHGVA 127 Myxococcus s...
WP_011164791     67 SGVFGGDSYNKTNNVGLNAHYHINPSWSVGVKYNY-SFNTLTPEGKAMVSKadqaAAANPKDPqylf-pqvvYPKSETLG 144 Bdellovibrio...
WP_012829055     70 GGLFAADLLSSSYIVGGSLAYYLTEDLALEASFDL--TPVDLDLDKPLAEF----FGDRRFSE---------GMGYLVLG 134 Haliangium o...
WP_012829056    109 GGFYQSDLFSGTYVAGGSYTYHMTESTAVEFGAAY-TRANADIIRAIEDGR----ASIIDDDN---------ERTLLVES 174 Haliangium o...
OUHSC:BDW_02795  67 YGYAMTEPIANVSKLGLGIYYHLNEDHAFGVFYTN-NMSGLSDYARQIEQA----PQTPLDLSkv------pLPKSSIMG 135 Bdellovibrio...
WP_014242980     59 FGFTTSGAFVDAKAFQGRVGYFIKEEFGVEFLYSK-NSGEENSTATSVRNPg--gPGSFPFRR---------IVDNYMGA 126 Bacteriovora...
WP_021268060     56 FGKTLSGAFVDSTSMQLRAGYFFSEELGAEFIYSS-NSGEENDTAASVRNSngggSGSIPFRR---------IVNDYIGA 125 Bacteriovora...
WP_021272634     61 FLSHLSNEYQDTIGGQAKIGHFLNEEWALEIDYKL-YSNSDNDAVKNIRQI----NQTEPFIR---------KPLSTTSL 126 Bacteriovora...
WP_014244034     64 YLSNLSGEYQDTSGINFRTGYYLNEEWAIEGFYNS-YSNKNNEAYENLQRI----NQSVPFIR---------RLTSSYGI 129 Bacteriovora...
OUHSC:BDW_02800  95 ATVLTNNPFFNTLGASVKGSYFLTESWGIELNYMGlTTSDRQITEELRDIQ----GVKTENLV---------YPKSFMGV 161 Bdellovibrio...
WP_015350116    128 GIRWAPIYGKLSLVSDLPAHFQAYVWAGGGMGSFKrnsviqcsqvvnreqgvcdnrgelgdrdsasedywvreTRVAPMV 207 Myxococcus s...
WP_011164791    145 MVNWYPVVGKLSFGKLGVAHFDTYLTAGYGQMELS--------------------------------------TGTSPAA 186 Bdellovibrio...
WP_012829055    135 GLLWSPIHAKLKMA-GSIVHADILVAAGAGRLLHD--------------------------------------SVQGVSF 175 Haliangium o...
WP_012829056    175 LLVWTPIYGKLRLG-GVISRFDINAALGVGVVDAP--------------------------------------TSRGAAG 215 Haliangium o...
OUHSC:BDW_02795 136 DYNLKAFYGKMSLTKSIVLNTVLYGSGSLGMIQYD--------------------------------------HKSYPAA 177 Bdellovibrio...
WP_014242980    127 MFLWSPFYNKINTF-NKIIYMDWILGIGFAKLEETnnrneits----------------------sggdtsltTESHTGL 183 Bacteriovora...
WP_021268060    126 MATWAPFYSKINTF-NTILYVDWIFGLGFAKLNETnngpevrag---------------------spnpgltiDESHTGL 183 Bacteriovora...
WP_021272634    127 YVTWSPFYGKINTF-NKIFYFDWHFSGGLSLINTEsnaetvad----------------------pnrpsefkKENYVGP 183 Bacteriovora...
WP_014244034    130 MGVWSPFYGKINTF-NKIIYFDWSFGLGVAKIDTEsnkdtvsd----------------------pnlsstftSESYTGA 186 Bacteriovora...
OUHSC:BDW_02800 162 DLMFVPIYGKMSWFNEKIIPFDLYFSAGYGTTNTQm-------------------------------------GEDVGTI 204 Bdellovibrio...
WP_015350116    208 SAAVGFRFFILNRHGLRLELRDWVFkdqyrvnlvreewesgrvTGESARSPGLTHLVQFDLGYTFSF 274 Myxococcus stipitatus
WP_011164791    187 TLGVGFGFWLSNNLTTRIEYRAQQY------------------KAEYYDKTENMMTNVASVQMGWML 235 Bdellovibrio bacteriovorus
WP_012829055    176 DAGMVLELYTSQWVTFRFDVRNLMA------------------VQEAVSETRLTNNIIATAGLSLWI 224 Haliangium ochraceum
WP_012829056    216 VAGFGMKLFLGRAVAFRIDVRNHVF------------------RQELLDERFIVKDLAITSGLSLYL 264 Haliangium ochraceum
OUHSC:BDW_02795 178 ALGMGQKFYFNKNWALRFDLRLYAHqgpvpf------vaggvpTSFDQFSERMMFTTNLDAGLSYLF 238 Bdellovibrio bacteriovorus W
WP_014242980    184 MWDIGAKFYITERWDIRIDLTSVNYka--------------meAKTVGAEEILYSNYDLTVALGITF 236 Bacteriovorax marinus
WP_021268060    184 MWDVSTKFYINQSWSIRADINGILYqaa-------------paRESGSESDQLYSNIDLTFAVQFDL 237 Bacteriovorax sp. BAL6_X
WP_021272634    184 SAKTGVRFHLKKGLHINIDYSKDFYrak------------gpiVNGREATQKWRNQSDIVFSIGFSF 238 Bacteriovorax sp. BSW11_IV
WP_014244034    187 VAKTGLRVHASKNWFIGIDLQRTMYkap------------gpvINSVPSSSKMRGTTDAILSVGFSF 241 Bacteriovorax marinus
OUHSC:BDW_02800 205 HLAAGQIFALSKAYAVRWDFSWNFFn-----------------AKGIDGNQNTFNNLFLTVGMSWFF 254 Bdellovibrio bacteriovorus W
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