Conserved Protein Domain Family
membra_charge

?
TIGR04561: membra_charge 
integral membrane protein
Members of this protein are short (about 85-residue), low-complexity sequences of unknown function, with a highly hydrophobic N-terminal region of about 40 amino acids followed by a charged (Asp, Glu, Lys, and Arg-rich), sometimes repetitive C-terminal region. Members occur exclusively among the Mollicutes (Mycoplasma, Mesoplasma, Acholeplasma, Spiroplasma, Entomoplasma). The gene neighborhood of this protein is not conserved.
Statistics
?
PSSM-Id: 275354
Aligned: 15 rows
Threshold Bit Score: 53.4358
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_008363881            10 NFKPIEVFGIAIPFWVIATVFGTIASLALIIFLLNFLVRKIKIIknkkdnknsNKTDQNNQNINDkKPIELEVNIIDEEI 89  Mycop...
jcvi:MMCAP2_0379         5 NFKPIEVFGIAIPFWIIATVFGTIAGLALIIFIISFLRYKFKTRkkk----nsKKNQKNSNNIDK-QPIEVEISIIDEEI 79  Mycop...
WP_019269513             9 HFKPIEVFGIAIPFRIFILVFAVIAILSLLIFILTYFIQKKK-----------NTNQTKQQDIQEi---------IDQEI 68  Mycop...
WP_027063169             9 PNAGVNIFGIPISFALIFYTFVILAGFSLVIYLLNLFLRKNEFK---------KATKINDEEFIKmTTLEASKANIDTEI 79  Mesop...
WP_026389740             3 PNAGINIFQQDISFDVIFYTFVALAAFALLIYILNMIFRKNKYR---------KVEKTNNVELIKiTTNEKQKNLIDDEI 73  Achol...
WP_031542951             9 PASGIEIFSKQIPFAIIFYFFIALGGLALLSYLLNIIFRKNVFK---------KINAEEDLELFKmTEIEQAKSEIDKEI 79  Mesop...
WP_004426997             4 YASGIEIFGINVNFITILTIFILIGSLTLIGYLMILLIWSRR--------------RKNDTKLRK-TELQKQLNYIDDEI 68  Mycop...
WP_015587404             5 SIFVIEIFDITIPFSTILLIFGILGSLAMLIYIGILLVLIRR--------------KKNNQKVIK-TELQKQLNLIDDEI 69  Mycop...
KuoIPMB:SCULI_v1c03640   2 MLTGFKVLDITIELWVILLVFGLIALVSLTLYFLIVLKKNQKFVf--------EKEEVNASDFKRlEKFDRLRNDFEIEI 73  Spiro...
WP_023789121             5 SSTVFKVLNFEVQLWVILLIFAIIGLTSLILYIFVLLKKNRKYLy--------EKTEVTAKDFKRlEKFEQLRNDFEIEL 76  Spiro...
WP_008363881            90 KQVLKQEKQNQ 100 Mycoplasma sp. G5847
jcvi:MMCAP2_0379        80 DEVLKKEKQNQ 90  Mycoplasma mycoides subsp. capri str. GM12
WP_019269513            69 NLIIKKEKEKQ 79  Mycoplasma capricolum
WP_027063169            80 ASIIKDRKELT 90  Mesoplasma seiffertii
WP_026389740            74 KSIIKDRKIQV 84  Acholeplasma multilocale
WP_031542951            80 EMLVTVKKQAT 90  Mesoplasma photuris
WP_004426997            69 VSIIENIKQEK 79  Mycoplasma yeatsii
WP_015587404            70 ISIINDLKHEK 80  Mycoplasma putrefaciens
KuoIPMB:SCULI_v1c03640  74 ASIKKLQKQGH 84  Spiroplasma culicicola AES-1
WP_023789121            77 AKIKKYMKSQK 87  Spiroplasma apis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap