Conserved Protein Domain Family
PKS_assoc

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TIGR04556: PKS_assoc 
polyketide synthase-associated domain
This model describes a rare domain found as the N-terminal region of a number of dinoflagellate-specific proteins that resemble type I polyketide synthases.
Statistics
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PSSM-Id: 275349
Aligned: 9 rows
Threshold Bit Score: 295.821
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AFW98413   99 EEGGFDIaWPASAPMSYglFGGMVTECLVSKGYCVVQMFTNKAVRDSAVEVAQELPG---FEKMKAEFEVGYLGNENITR 175  Alexandrium osten...
AFW98412   74 DLKGYDFvFGPKSDFDT--VGSEMADTLASKGYAVMKLLVSAEEAEESVTAAKKLEDddqFSRLAVEFERGYLGKEGSAK 151  Alexandrium osten...
AFW98415   74 ELSGYDFvFGPKSDFDT--VGAELADVLATKGYAVMKLFVADEDASDMVACAKRLEAedqFSRLAVEFESGYLGKESTAK 151  Heterocapsa triqu...
ABQ85797   74 DMDGIDFvMGPKSDPTV--VGEQLSDALADKGFATVKIVVSEADTAAMLEATKLLEDdeqFGRLAVEFEPGYLGRGAGAK 151  Karenia brevis
ABQ85800   77 DIEEFDVaLGPRSDPEV--MGEEITDLLAMSGAALCKLFIAPEDLEGMVAVGSKCLDagdFVRLPSELEPGYLGKDCTAK 154  Karenia brevis
AFW98411   74 PPDAFDIvIGPRTAREP--LGEAMAEALTGRGFCAMRIIQGSDDLSRTFDSLKQLDRegkFGRLCMEVEEGYLGKNGRAK 151  Alexandrium osten...
AFW98414   76 GLNSFDVlIGPCSQDDV--IGEEIAACLFEKGFCVLRTCQAPDETASAVTVMRQKGDsgrLFRLPEEVEEGYLGFGAKGK 153  Heterocapsa triqu...
ABQ85796    9 GENEADImKGGSPEEDC----SLIEFCLKTKGYCCIGDAVDEASMQKARDEILDLEGlgkLKVPNSLVQDGLLGPDGSAQ 84   Karenia brevis
ABQ85798    3 KKDAYDVdLLSLDESLQ---GPMILNHLQTKGFCKIKADVSSEDLDEAFKESEKLDSasrFFYPSVLLHEALLGVQGSSR 79   Karenia brevis
AFW98413  176 CAVIE-TDAP---DKLLEDGLAYCDRDLTNMGMLLTPTASSVFGFEPYSRSNAFVRTPYTEEGq--RPvALEDADFSDQN 249  Alexandrium osten...
AFW98412  152 TLLLD-PSSPdvpDYVLASPLKMMDHNFGAISQMIGPYTQEAMGFDIYSRTTMLLRMPLAEGD---ED-KYPPADIDDGD 226  Alexandrium osten...
AFW98415  152 TLLLD-PSSSeapAHVADSPLATMDQNFGAICQMLGPHSEESLGFEIYSRTGLLLRMPLEESD---ED-RYPPAELDDGD 226  Heterocapsa triqu...
ABQ85797  152 VLHLD-PQSEsvpRVVADSPLKVMDNNFSAVSSMLAPYSNEKLGFDIYSRTSMLLRMPIGDHE---EE-KYPPAEVDEAE 226  Karenia brevis
ABQ85800  155 TMNLD-MESEdaeDFVKNSQVKMVEAAFSSVGQMLAPYTEAKFGFTVYSRSNTMLTLPLESGD---ES-EYAPPEVENEE 229  Karenia brevis
AFW98411  152 VMWVD-PESP---ALPSDSLVLKNDGNMSSIAEILLPYCENCVGQAVAERTPALVCLSMTDDD---LV-DYDNPAATDDA 223  Alexandrium osten...
AFW98414  154 VAWLD-ASNA---DAPKNPTLDKSDAFISKLAGLIQPASGDILGKHVDERTPALASLSLPDDE---EA-EYPPQDADDGT 225  Heterocapsa triqu...
ABQ85796   85 IAEMEiTSFTedaIAPEGEELRKIDLMMWSLSKSVI-LCQESLGFEGTSRSTAFIHQSGDTGE---EM------ELTDLE 154  Karenia brevis
ABQ85798   80 IAKMHrIDAPdsqYSADGEHLQKLDELLTDIAMILQPYFQEL-GFSCSGRTVGMLHENHPNGQmalVEaFQKESKMTETE 158  Karenia brevis
AFW98413  250 VEKFLAWIMRRRLSLIHLIENDGGTFELYPKEHl-------KMDSVRLPLQKSRMIIFRHDLMGYSYQPQ--GESLALQM 320  Alexandrium osten...
AFW98412  227 AEGYLHTMARKRLTLLQFVGPAGGTLRLSPTSE--------GGEEVKISAEPGSVVLIVASRYEYSLETE--GESLTLTC 296  Alexandrium osten...
AFW98415  227 AESYMHTMCRKKLTLLQFVGPTSGTITLSLPGDg-------EGGDIELQAEPHTVIIMVNSRYAYEYDPT--GENLALAT 297  Heterocapsa triqu...
ABQ85797  227 AESYLHLMYRRQLTVLQFVGPEGGSMKLLPKRA--------GGVEYSVKADPNTMVLISSSLYDYSYEPL--GASLTLQT 296  Karenia brevis
ABQ85800  230 AASFLQLMYRAKLMVIVNAGPGNATLTLFPKAE--------GEGAKTFTVQPGMMAIVAVDQYKFSYVPS--GNSLTFRS 299  Karenia brevis
AFW98411  224 LNEYYSTWCRAVFRIIHFMGPTKGRAILKVKKNspl---qlADDTFEVCAAPNTILVIREDTFEYTYEEPedGEACWLTS 300  Alexandrium osten...
AFW98414  226 LGDFLRTCRRSLIKVVHFMGPGVSNVTLESTEEngaeslpcKQNSVEIAAEPSTILVFRSGAFRYGCHAD--GECLSLSA 303  Heterocapsa triqu...
ABQ85796  155 ADKWSSIFLRRKVAILVFLGPDSGTLELQPYDE--------DANPSEITTYPGLVVLLRTDQLSFKHEST--GVTSCISS 224  Karenia brevis
ABQ85798  159 ASKWLVDLIRGKILCVVSMGPTAGSMTLQPFSD--------ADESIEVPTAPGDVFLIRQDALIHRHSSK--AKCTLMSC 228  Karenia brevis
AFW98413  321 WLMEP 325  Alexandrium ostenfeldii
AFW98412  297 FYMAE 301  Alexandrium ostenfeldii
AFW98415  298 FMLSP 302  Heterocapsa triquetra
ABQ85797  297 FFLQA 301  Karenia brevis
ABQ85800  300 WFLDT 304  Karenia brevis
AFW98411  301 FLMRQ 305  Alexandrium ostenfeldii
AFW98414  304 NLLQH 308  Heterocapsa triquetra
ABQ85796  225 FIMQD 229  Karenia brevis
ABQ85798  229 FYMTD 233  Karenia brevis
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