Conserved Protein Domain Family
rSAM_ahbD_hemeb

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TIGR04545: rSAM_ahbD_hemeb 
heme b synthase
Members of this family are AhbD (alternative heme biosynthetic protein D), a radical SAM enzyme in sulfate-reducing bacteria and methanogens that performs the last decarboxylations to synthesize heme b from Fe-coproporphyrin III. Members include DVU_0855, previously included in error in TIGR04055, the NirJ2 family thought to be involved in heme d1 biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Statistics
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PSSM-Id: 275338
Aligned: 4 rows
Threshold Bit Score: 657.293
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_010938155  22 LIAWEVTRSCNLACKHCRAEAHMEPYPGEFSTDEAKALIDTFPDVGNPIIIFTGGDPMMRGDVYELIAYATDKGLRCVMS 101 Desulfovibrio v...
WP_011416493  12 MVAWEVTRSCNLSCIHCRASAEKGPYAGELSTEESKNLLEEIAAFSRPVVILTGGEPLLREDIYELAAYGDGLGLRMVLA 91  Syntrophus acid...
WP_011499301   7 LIAWELTWGCNLACVHCRGSSTSEIPEGELSTSEAKHFVDEIVEMGDPILILTGGEPLVRKDVYEIARYATDKGLRVALA 86  Methanococcoide...
WP_011033668  10 LIAWELTAGCNLNCVHCRGASTSSVPADELTTDEAKHFIDEVAGLGKPILILSGGEPLTRSDVFEIARYGTDAGLRVVLA 89  Methanosarcina ...
WP_010938155 102 PNGTLITPEHAQRMKASGVQRCSISIDGPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTRDNLHSFKDIFK 181 Desulfovibrio v...
WP_011416493  92 TNGTLVTEGIARRMRESGIQRVSISLDGPDAESHDAFRQMSGAFAGAMTGIAALKKAGMEFQVNTTITSTNRHQLSAMMD 171 Syntrophus acid...
WP_011499301  87 TNGTLLNDGVVKKLKDAGVQRVSISIDGSTAQTHDDFRGVPGAFESSMRGIEYLKAGGLGFQINTTITKRNIDEIPAILE 166 Methanococcoide...
WP_011033668  90 TNGTLLTPEIVEKLKKAGVQRLSISIDGATAETHDNFRGMPGAFERTLAGIEVLRKADFPFQINTTVSKRNLEEIHKTFD 169 Methanosarcina ...
WP_010938155 182 LCERIGAVAWHIFLLVPTGRAAGLSDQVISAAEYEEVLNWFYDFRKTTSMHLKATCAPHYYRIMRQRAKEEGVSVTPDNF 261 Desulfovibrio v...
WP_011416493 172 LAVRLGAAAHHIFLLVPTGRGRDLANQAISAQDYEDTLQAFHSASLTCPIPLKATCAPHYYRILHQKGSAGKRPSTEGHG 251 Syntrophus acid...
WP_011499301 167 IATNIGAEAHHIFLLVPTGRGKELENEEIPPAEYERVLNWFYDQQKHVKIQLKATCAPHYFRIMRQRAKREGTEVTVKTH 246 Methanococcoide...
WP_011033668 170 LAKELGAVAYHVFFLVPTGRGE--ESDEVSPADYERILHWFYEMQKKSEIQLKATCAPHYFRIMRQQAKKEGIEISVKTH 247 Methanosarcina ...
WP_010938155 262 GMDAMTRGCLGGTGFCFISHTGQVQPCGYLELDCGNVRNTPFPEIWRKSEHFRQFRTQEEYTGKCGPCEYHKVCGGCRAR 341 Desulfovibrio v...
WP_011416493 252 TLHAVTRGCLGGISFCFISHTGQVQPCGYLELNCGNIRKAGFEMIWKNAAVFQKLRNPEAFSGKCGHCEFFRVCGGCRAR 331 Syntrophus acid...
WP_011499301 247 GYEAMTRGCLGGISFCFVSSTGDVQPCGYLPVIAGNIKEKSFKEIWEDSVLFNDLRDYDKLGGKCGRCSYKNVCGGCRAR 326 Methanococcoide...
WP_011033668 248 GYEAMTKGCLGGTGFCFVSSVGEVYPCGYLPVLAGKLREQPFREIWENSEVFAKLRNPEELKGKCGICEYKKVCAGCRAR 327 Methanosarcina ...
WP_010938155 342 AYNMSGDHMAEEPLCSYKP 360 Desulfovibrio vulgaris
WP_011416493 332 AYELTGDYLAEEPFCIYEP 350 Syntrophus aciditrophicus
WP_011499301 327 AYAATGDYMAEEPYCIYNP 345 Methanococcoides burtonii
WP_011033668 328 AYAATGDYLEEEPYCIYRP 346 Methanosarcina mazei
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