Conserved Protein Domain Family
AbiV_defense
?
TIGR04498: AbiV_defense 
abortive infection protein, AbiV family
This family includes AbiV (abortive infection system V) from Lactococcus lactis, a phage resistance protein that causes certain phage infections to fail to lead to successful phage replication. Abortive infection mechanisms differ greatly. AbiV interacts directly with the protein SaV in phage p2 and blocks translation of phage proteins.
Links
?
Statistics
?
PSSM-Id: 275291
Aligned: 55 rows
Threshold Bit Score: 73.4969
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
WP_019175571  10 RFWKALIDNASGLIADAHALLERGSYGRARSLTVLAQEELGKALWIYETfeqawsT--GASEAQEVARLTSDGR-----R 82  Brevibacterium ...
WP_017363802  31 DDFNRACDHILVLLADAFQCFERGSWGTSVFLSITAIEEVAKAEVGLY-------R--REGKMEKAKRSQDKLF-----N 96  Pseudomonas men...
WP_006019910  35 VDFNSAFYHIVALLDDAAVLFERSSFNTSAFLAITAIEETAKAHVGL--------F--RKGGDVAKRKGRDPLR-----D 99  Afipia broomeae
ABW08106      31 DDFNKAIDHIITLLDDSFTLLNKKSYGSCVFFAITSMEEVSKTHFS---------L--FMKHDTEKNNNKDPLF-----N 94  Enterococcus fa...
WP_022967665  26 DEFNAAVTHVVELIRASYALFKQGFYAPSVFVSITVFEEMAKIKAGHTR------S--RLNTKARVKRGKDPLF-----N 92  Pseudomonas caeni
WP_009839461  27 DEYNSAIMHVKELINAANVLFMAKSYAPSVFLSITIFEEIAKIKSGHMR------S--WGQEIKQVRRSKDPLF-----Q 93  Pseudoalteromon...
WP_016788369   7 KEYNLAIFYVGELIESAYILFLSKKYVSSSIILSSVFDEISKIKKWQIE------I--YGGSSVEEQRIN--LV-----K 71  Vibrio cyclitro...
WP_011834704  29 DDLNKCIDHISVLIKDAYLLYTNESFATSTFISITIIEEVGKTHIGM-----------FISENKDIKRGKDPLR-----N 92  Lactococcus lactis
WP_015414318 110 EKYQKCNAYVFDCWRKALNACRQGDYPQAVFLSILALEEAAKFHQAWYE------LfyNDGKPINAKKNQPPRRkdykfN 183 Desulfovibrio p...
WP_015180308   1 MISEQHREHLEKYWRLSQRFFQEGDYALSTFFATSLIEEVGKVIIL-------------GNKQVSGKLDKQAFY-----K 62  Microcoleus sp....

WP_019175571  83 HAVKYMEAfvfgqeLAAFwgdyeayEPPEDQSQEGW--TAHFAkkksEAEA-A-GKK-ANSEKMTGFYVDLEgeGGAVLS 157 Brevibacterium ...
WP_017363802  97 HQEKHRMA------ILPT-------VFMGKRLEEALgkERCAE----LLKE-A-AHGeFRNLRESSLYFSND--NGQFVT 155 Pseudomonas men...
WP_006019910 100 HKKKHQMG------VLPT-------VFMGDRLTTVLgkDACVR----LENE-A-QTDgFTTTREASLYCARL--NGRFVT 158 Afipia broomeae
ABW08106      95 HSKKQRLS------ITPV-------FQMGSRLPEVIgpERVEQ----LISLvY-KNNdFFTLRNNAIYWNTS--QFGNKF 154 Enterococcus fa...
WP_022967665  93 HGKKHKIS------VDPL-------YLIGDRIANSIghDRAVE----IFKG-Y-ETGeYSEFREKSLYFSRG--SSGLHI 151 Pseudomonas caeni
WP_009839461  94 HVKKHKIA------LDNM-------YLIGDRLENSMgkDRAEE----FFRK-Y-QTGeYSNFREESLYFARC--KNKLHI 152 Pseudoalteromon...
WP_016788369  72 STKKHDTL------LGLN-------SSVAKRLALIIsdDRVKD----IFHR-Y-ALG--VNFDKEILTLNRD--KDGLNS 128 Vibrio cyclitro...
WP_011834704  93 HKSKHAFG------SLPT-------IKMGGRLNKAIgdEMIDK----IVED-A-ETGeLISIRESSLYADII--DDILEV 151 Lactococcus lactis
WP_015414318 184 HKKKHFVS------IVSG-------ALLNHRVEGLFgkDKVVE----FVGM-A-ENGeLENVRQSCLYATVG--DEGPVY 242 Desulfovibrio p...
WP_015180308  63 HQNKYIYA------VYTT-------LLINSRVTRIY--GENENr---FANW-FrEEE-LFKLRNKALYAEIS--PEGVLV 120 Microcoleus sp....

WP_019175571 158 PADVSAGTIDADLQTAAQ 175 Brevibacterium massiliense
WP_017363802 156 PANVVSQNRAKEFLLLAL 173 Pseudomonas mendocina
WP_006019910 159 PRGAVTRARARELLLLAI 176 Afipia broomeae
ABW08106     155 PNDYIDKKLAQEILLFAI 172 Enterococcus faecalis
WP_022967665 152 PAEHFDKKLSAEHLLIAI 169 Pseudomonas caeni
WP_009839461 153 PSQQFDIKLSAEHLLVAI 170 Pseudoalteromonas tunicata
WP_016788369 129 PLDKFDIIFTAEYFITVI 146 Vibrio cyclitrophicus
WP_011834704 152 PSEKISKEQSRALLLYAI 169 Lactococcus lactis
WP_015414318 243 PDDVISQETAIFYVVFLG 260 Desulfovibrio piezophilus
WP_015180308 121 PEQMIDSKDSFLLICIgg 138 Microcoleus sp. PCC 7113
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap