Conserved Protein Domain Family
D_pro_red_PrdB
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TIGR04483: D_pro_red_PrdB 
D-proline reductase (dithiol), PrdB protein
Members of this family form the PrdB subunit, usually a selenoprotein, in the D-proline reductase complex. The usual pathway is conversion of L-protein to D-proline by a racemase, then use of D-proline as an electron acceptor coupled to ATP generation under anaerobic conditions.
Links
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Statistics
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PSSM-Id: 275276
Aligned: 9 rows
Threshold Bit Score: 454.25
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_010025657   4 TTAQHLKSEIYVPITPPPVWTPLAKPLSECTVAFCTAGGVHLKSQPRFNLSGDYSFRTIPSETPSSELMVSHGGFDNSDV 83  Sporolactobacil...
WP_003488163   4 TTAKGMKSEVYAPVTPPPVWTPLTKALKDCKVGFATAGGIHIKTQEPFKTAGDFTYRIIPSDTPSSELMVTHGGFDNSDI 83  Clostridium spo...
WP_017751670   4 TTASGLKSEIFVPITPKPVWTELKKPLSECKVAFITAGGIHKKDQVPFNTAGDYTYRPISSDTPTSQLMVTHGGFDNSDI 83  Clostridium tyr...
WP_002846515   4 TGKEGLQSEIFVPVTPKPVFVELKKPLSECKVAFITAGGIHKKSQTPFNTSGDFSYRTIEFDTPTSELMVTHGGFDNSDI 83  Peptostreptococ...
WP_004098113   4 TVATGLKSEVHVPVTPPAVWTPLPKPLRQCKVGFFSGCGVHLKSQEPYNTAGDISYRLLPTNVSVKDMMITHGGFDNSDA 83  Acetonema longum
WP_015450924   8 TTVPGLKSEVYVPITPKPVWTPLTKPLSECKVAFITSGGIHKKDQKPFDTAGDWSYREIPSDTPSDQLMVTHGGFDNSDI 87  Bifidobacterium...
WP_020739205   4 TTATGLKSEIVVPITPPAVWTPLAKPLAECVVALCTAGGVHLKSQRPFVLSGDHTFREIPSTTPSSELMVSHGGFDNSDV 83  Sorangium cellu...
WP_011986810   2 NIVKGLQSEIFVPITPNPVWAPVTMELKDMTVALATAAGVHLKSDKRFNLAGDFTYRLVPGDAKTSDMMVSHGGYDNGDV 81  Clostridium bot...
WP_012157915   4 SIVKGLQSEIFVPITPPPVWTPVKKELKDMTIALATAAGVHLKSDKRFNLAGDFSFREVPVESLSTDLMVSHGGYDNGDV 83  Alkaliphilus or...

WP_010025657  84 NKDINSMLPIDRLHELEKEGFIGKVAPVLIGFMGGGGNVQKFKQESGPEIAEILKNEGVDIAVFTGGCGTCHRSATIVER 163 Sporolactobacil...
WP_003488163  84 NKDVNAMLPIDRLHELAKEGFIGSVSPVLIGFMGGGGNVQKFKEETGPAIAKIFKDEGVDIVLLTGGCGTCHRSATIVQR 163 Clostridium spo...
WP_017751670  84 NKDVNAMFPLDRLRELVEEGFIGSLADEMYGFMGGGGNVDKFKNETGPEIASKLKAQGVDIVLCTGGCGTCHRSATIVTR 163 Clostridium tyr...
WP_002846515  84 NKDVNAMLPIDRLHELVEEGFIGSLSHETYTFMGGGGNVEKFRGETGPEIAKKLKEQGVDIVLCTGGCGTCHRSATIVTR 163 Peptostreptococ...
WP_004098113  84 NKDVNAVMPLDRMHELAAEGFIGSVADHFIGYMGGGGNVQKFRDEIGPAIAKLLKEEGVDIAVATGGCGSCHRSTVMVQR 163 Acetonema longum
WP_015450924  88 NKDVNAMLPIDRLHELVDEGFIGSLVPTFYGFMGGGGNVDKFEHVTGPEIAKKLKAEGADIVLATGGCGTCHRSCTLVLR 167 Bifidobacterium...
WP_020739205  84 NRDINAMFPIDRLRELEAEGFVGKVAPTLVGFMGGGGDVDRLRGESGPAIAKILKDEGVDIAVFTGGCGTCHRSAVVVQR 163 Sorangium cellu...
WP_011986810  82 NKDINAMFPIDRLRELADAGFIKAVAKTHIGFMGGGGNQQKFREETGPEVAKILKEEGVDAVLMTAGUGTCHRSAVIVQR 161 Clostridium bot...
WP_012157915  84 NKDINCMFPIDRLKELAEEGFIKAAAPVHFGFMGGGGDQQKFQEETGPEIARRLKSEGVDAVLLTAGUGTCHRSAVIVQR 163 Alkaliphilus or...

WP_010025657 164 AVESVGISTAIIAALPPIAKQQGAPRITAPHVPIGSNAGEPNNVAMQTAILKDTLTAIEEMTTFGQMKTLPYEYRHNV 241 Sporolactobacillu...
WP_003488163 164 AIESVGISTIIVAALPPIAKQQGAPRIAAAHVPIGSNAGEPNNIEMQTAILKDSLNAMTKMKEFGELIMLPYEYRHNV 241 Clostridium sporo...
WP_017751670 164 ACEEAGMSCIVIAALPPIAQQQGAPRIAAAHVPIGSNAGEPNNIEMQMGILKDSLQCVAEFDHFGQLKLLPYEYRHNV 241 Clostridium tyrob...
WP_002846515 164 CCEEAGMSCCVIAALPPIARQQGAPRITAPHVPIGSNAGEPNNPAMQTAIIKESLEWVRDCPSFNQTKILPYEYRHNV 241 Peptostreptococcu...
WP_004098113 164 AVEAAGISTILIAALPPIAKQQGAPRISAPHVPMGANAGEPNNKEMQMGILRDTLKAMETMTSFGQMVVLPYEYRHNV 241 Acetonema longum
WP_015450924 168 ACEAEGMSTCIIAALPPIARQQGAPRITAPHVPIGSNAGEPNNPKMQMGILKDTLNAMEEFDHFGQMKTLPYEYRHNV 245 Bifidobacterium t...
WP_020739205 164 AVETAGMSTIIIAALPPIARQQGAPRITAPRVPIGSNAGEPRNVEMQTAILKDTLRAVEEMTHFGQVKALPYEYRHDV 241 Sorangium cellulosum
WP_011986810 162 AIEEIGIPTIIIAALPPVVKQSGTPRAVAPRVPMGANAGEPNNVEMQTAIVKETLEQLIKIPSAGKVVPLPYEYIAKV 239 Clostridium botul...
WP_012157915 164 AIEESGIPTIIIAALPPVVRQNGTPRAVAPLVPMGANAGAPNDKAMQTAIVRDSLIQLVEITSAGKIVQLPYEYTAKV 241 Alkaliphilus orem...
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