Conserved Protein Domain Family
D_pro_red_PrdA

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TIGR04480: D_pro_red_PrdA 
D-proline reductase (dithiol), PrdA proprotein
Members of this family are the PrdA proprotein. The polypeptide undergoes an autocatalytic cleavage that creates two subunits, one with a Cys-derived pyruvoyl motiety critical for activity. The D-proline reductase complex also contains a subunit derived from the prdB gene. The complex acts on D-proline, which may be supplied from L-proline by an active proline racemase encoded nearby.
Statistics
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PSSM-Id: 275273
Aligned: 12 rows
Threshold Bit Score: 971.504
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_08260822    4 TVETAKEHLNDKAVFCCRAEEGIVISPENLEDPGLFDDLVDSGLLSFPDDALTIGQVLGAKLTKTTDALVPITPAIIDAV 83  Gemella sanguin...
ZP_03292852    4 TVETAQAHANDPAVTCCRFEAGTVVEPANLEDPAIFPDLVESGLLVLPENTLTIGQVLGAKLTATCDALTALTPENAEGF 83  Clostridium hir...
ZP_09154008    4 TKETAKAHENDPAVLCCRFEAGTIIEPSNLEDPAIFPDLVDSGLLEIGENTLKIKEVLGAKLIKTSDALTPLTNDLLEGA 83  Johnsonella ign...
ZP_08128225    4 TAETAKEHANDPAVLCCRAEEGITIQASNLEDPAIFDDLVDSGLLDL-EGALTIEQVLGATLTKTCDSLCPLTADVVEGA 82  Clostridium sp. D5
ZP_07758135    4 TAETAQEHAKDPAVLCCRAEAGTVLSASNLEDPNIFPDLVDSGLLTIPDNVTHIGEVIGATLKVTADSLVALTPDMLDGM 83  Megasphaera mic...
ZP_05744835    4 SVETAKEHLNDPAVLCCRREKGKLLEASDLEDPTLFPDYEDSGLLELPDNVLKIGQVLGATLDKTMDALLPLTPDVVDNI 83  Lactobacillus a...
ZP_08626045    4 SEETAKHHNNDPAVVCCMTRAGAIIRPADLEDPSLFGELEDSGLLDLSGNVLKIGQVIGAKLIKTLNAMTPITPDAVEGG 83  Acetonema longu...
WP_012157913   4 SLETAKDHGNDPAVSCCRFEAGIVIGPSNLEDPNIFPDLVDSKLLQIPEDCLKISEVIGAKLIKTIDALVPITADYVEGI 83  Alkaliphilus or...
WP_013362444   4 TLESAKEHANDLAVLCCRAEEGTVIGPSNLEDPAIFGDLEDSGLLTIPANCLKIGEVLGAKLVKTADSLTPLTPELLEGV 83  [Clostridium] s...
WP_013276441   4 TPETANQHKNDPAVVCCLTHEGTIISPADLEDPAIFPDLEDSGLLTIPENVLTIGQVLGKKLIKTIDALTPITPDMIEGG 83  Thermosediminib...
WP_012101189   4 TNETVNQHKKDPAIVCCRTTEGTIIGPGELEDPNILPDLEDSGLVEIPSNVLKIGQVIGAKLLKDIDGLTPLTADLLEGI 83  Clostridium bot...
WP_014015395   4 TKDTLQKHLTDPAVFCCRRAKGTVIGADDLEDPTLFDDMVDAGLLTLSDDGLTIEEVLGSTLQKDVEALTPITKDVLDKV 83  Megasphaera els...
ZP_08260822   84 QGGEEKA--EEKQEEVAEVAPAAEVAeaA--PVAPvaap-vaqaSAPAGVFKLQIGKGENINLEIPLS-AFAQQAAQPAP 157 Gemella sanguin...
ZP_03292852   84 SAGEEEA--AEEVVEEAPVAEEAPAPvaP--VAAP---------AVAGGVFKLHIGEGKDINLEIPLGaMGGAAAPAPVA 150 Clostridium hir...
ZP_09154008   84 AAASSESveDLKAEDKAEISSAPVQTasS--VSAPaf-----vsSGNGGSVRIHIGEGKDINLEFPLSvAASMGVAAVPA 156 Johnsonella ign...
ZP_08128225   83 KAAAA-P--EKAAEQAAEPAPAVPAA--P--QAA----------VGPGQVLRIHIGEGKDIDIELPVG-LANISAPTPAG 144 Clostridium sp. D5
ZP_07758135   84 TAMAEEA--PAAEEAPAEAAPVAEAA--P--VAAPvag---atvATVGGSVRIHIGEGKNIDLEFPLG-VGGAGVAAPVA 153 Megasphaera mic...
ZP_05744835   84 QDPSAQD--D---EEDTDNAPATEDA--T--PASPdvtatvangNVSNGVVHLSVKEGKGIELDVPLA-MVNQGAVKNAP 153 Lactobacillus a...
ZP_08626045   84 AGTAEAA--NNTAFAKNGQAGDTAMAvaT--GTTP---------GGTGGVVNISIGEGHDIKFSV----VLGGGAVTAVP 146 Acetonema longu...
WP_012157913  84 HKPVAVE--EKSNATKQEEKKVESIV--PqeVSSK---------AKNTAMIKIHIGEGKDIDLEIPIL-LSGANTISGLD 149 Alkaliphilus or...
WP_013362444  84 NSISEEA--PKQEASAPVEAPVAEVA--P--AAMPv-------aNVTGSMLKIHIGEGKDINLEIPLT-IAGQMGVVAPT 149 [Clostridium] s...
WP_013276441  84 LDQGEKP--EVVEEAEMVQSGAAQTV--T----------------GAGNVIRIHIEEGKGINLEIPAI-VTAAGTAEPAA 142 Thermosediminib...
WP_012101189  84 VEEVKEG--NNKVQNGGDKVENISAN--K--VT-----------QCSGGIVRLTVDQMNGVNLEFPVG-AFNGGNISSSE 145 Clostridium bot...
WP_014015395  84 NPKSAKP--VETVPTAAPAKAAAPE-------------------AAPSGTIHLKIDKLEGLSLDIPAGtVLGASGVLPAA 142 Megasphaera els...
ZP_08260822  158 AAAVVegksaavaeaapVA------VEAKAEEKHEGESKF-IRSLKTKHYKIDKVVFGEKTEIQGTTLVLRtpEDLCKEA 230 Gemella sanguin...
ZP_03292852  151 PAAEA------------AA------VPAVEEAKKEEKTTL-IRSLTKKHFKIDKVVFGEETKIEGTTLTLRtpEDLCKEA 211 Clostridium hir...
ZP_09154008  157 LQPAAvsaaaggvpqaeAG------VAGGESKKIEGDERV-MRTLKRRHLKIEKVEIGDETKIEGTTLYIR--KGIEKEA 227 Johnsonella ign...
ZP_08128225  145 VPGVI------------PE------LAADTEVQETNEEKI-VRTLTRKHYNITEVKRGPETKIEGTTLYIR--EGIEKEC 203 Clostridium sp. D5
ZP_07758135  154 GASVAaaga----ttaaTG------EAVAAVAESAAQEEVkVRELRHDHLKIEKVEFGEETKIEGTTLYVRk-DGICQEA 222 Megasphaera mic...
ZP_05744835  154 SAGET--------------------KETTSQQEPEVDEEV-VRTLTRKHFKIDKVEFGDETKIDGTTLVIGntDELCKEA 212 Lactobacillus a...
ZP_08626045  147 AAIKT--------------------------ATLKYEDKV-IRTLKQREFPVEKVELGRETSFEDGVLVIK--EQLCSDA 197 Acetonema longu...
WP_012157913 150 DAEQM------------VArteevkEARSNIMDQPFVSKE-IRRLTKKHFSITSVEFGKETKIDGTTLYIR--EDICKDA 214 Alkaliphilus or...
WP_013362444 150 AAAPAgva-------mpVA------SATEQVVAPAGEPKL-VRTLQKKHFKIEKVEFGPETKIENNTIYIR--ENICEDA 213 [Clostridium] s...
WP_013276441 143 KPVEG----------------------AQEAVKPRVEDRV-RRTLLMREFEVKEVRLGDETSFENGVLTIR--KGLVEDA 197 Thermosediminib...
WP_012101189 146 GITE------------------------------KIEDEI-VSTLKKREFAVKKVELGKETYFKDGVLTIR--EELCKEA 192 Clostridium bot...
WP_014015395 143 ETGRG-------------------------------EKKV-IRTLLKKHIKITDVEISDHTAIKDGKIFID--GSIVDKA 188 Megasphaera els...
ZP_08260822  231 AASEELVEDVKLEIITPDKYDTYSETIMDVQPIAVKE-EGEIGHGVTRELKGVVMVLTGTDANGVQIGEFGSSEGELERN 309 Gemella sanguin...
ZP_03292852  212 VDTEELVYDMKLDIITPDRYNEYSEAILDIQPIATKE-EGELGEGITRTIDGVVMVLSGTDANGVQIGEFGSSEGEMSTT 290 Clostridium hir...
ZP_09154008  228 VETQELVVSLKLDIITPDKYSQYSETIMDVQPIAAKE-EGELGTGVTRVLDGVVMLVTGTDEGGVQIGEFGSSEGELEKN 306 Johnsonella ign...
ZP_08128225  204 VDSQELVFDLKIDIITPEDYHTYSETIMDVQPIACKEgEDEVGSGTTRVLDGVIMMVTGTDANGVQIGEFGSSEGYLDEN 283 Clostridium sp. D5
ZP_07758135  223 MDTQELVKDLTFDIITPDRYGEVSNTIMDVQPLATKM-EGDLGEGITRVLDGVVFIVSGTDEDGVQIGEFGSSEGEMDQN 301 Megasphaera mic...
ZP_05744835  213 LENHEIVKDISVSVITPDDYHKYTNSIMDVQPIATKE-EGELGEGVTRVLDGVVTVLTGTDENGVQVGEFGSSEGYVDEN 291 Lactobacillus a...
ZP_08626045  198 LNADPLVKKVSLDIITPENKHVHTNTIMDVIPIAVKT-EGKLGEGITHVMSGAVVVLTGVDEGGSQVHEFGSCEGYLDEK 276 Acetonema longu...
WP_012157913 215 LKADKLVVDIKLDIITPDRYKEYSETIMDVQPIATKE-EGKLGNGITRVLDGVIIMVTGTDENGVQIGEFGSSEGVLETN 293 Alkaliphilus or...
WP_013362444 214 VKVSNLVTDIKVEIITPADYGKYSETIMDVQPIATKEgDGKIGQGVTRVIDGAIIMVTGTDEDGVQIGEFGSSEGELDAN 293 [Clostridium] s...
WP_013276441 198 LKADPIAKKMEIDIITPDNKNVFTNTIMDVIPIATKV-EGSLGEGVTHVMSGAVVILTGVDESGIQVHEFGSCEGIIGEK 276 Thermosediminib...
WP_012101189 193 LKADPLVKKLEMDIITPDNRHVYSNTIMDVIPVATKV-EGQLGEGITHILNGMVFILTGVDEAGVQVHEFGSCEGYLDEK 271 Clostridium bot...
WP_014015395 189 VKEDPLCVSMSLDVIYPDKRHVYTDTIMDVAPIATKV-EGELGEGVTKVADGVVFMLTGVDEDGVQIHEFGSSEGFLDEK 267 Megasphaera els...
ZP_08260822  310 IMWGRPGAPDKGEIFIKGQVTIKAGANMERPGPLAAHKAFDHITEEIRKALKElEDESLVVGDINIEQYRHPGNKKVLIV 389 Gemella sanguin...
ZP_03292852  291 MMWGRPGAADKGEIFIKGEVTIKEGTNMERPGPLAAHKAFDHITQEIREALKK-ADESLVVDTQVIDQFRREGKKKIVIV 369 Clostridium hir...
ZP_09154008  307 IMWGRPGSPDKGEIFIKTEVVIKAHTNMERPGPLAAHRASDYITDEIRKAIKE-ADASLIVSEEEFVQKRHSGKKKVVIV 385 Johnsonella ign...
ZP_08128225  284 IMWNRPGAPDKGEIFIKTQVTIKEGTNMERPGPLAAHTATDHITQEIREALKElENDSLVVDTETFDQVRRPGKKKVVIV 363 Clostridium sp. D5
ZP_07758135  302 IMWGRPGSPDKGEIFIKTNVTIRAKSNMERPGPLAAHRASDYIAQEIREAIKK-ADDSLVVEKEEIVQYRRPGKPRVVVI 380 Megasphaera mic...
ZP_05744835  292 VMWGRPGAIDKGEIMLVINATVQAGTNRERRGPRGAHEAADTIVEHIREALKK-ADDSLVVDTEKIEQKRRFGNKRVLLV 370 Lactobacillus a...
ZP_08626045  277 IRYNRPGCPDEDDILIRVHVMIKEGTGMERRGVTAAHRACDAILQKIREVLKQ-APVAEAVIENVIRDVKRIGRPRVVLV 355 Acetonema longu...
WP_012157913 294 IMWGRPGAPDKGDIFIKTQVVIKDGTNMERPGPLAAHKASDFITQEIREALKR-LDESLVTNVEELVQYRRPGKKKIAIV 372 Alkaliphilus or...
WP_013362444 294 IMWGRPGAPDKGEILIKTQVTIKAGTNMERPGPLAAHKATDFITQEIREALKK-LDDSEVVETEELAQYRRPGKKKVVII 372 [Clostridium] s...
WP_013276441 277 VRFGRPGCPDENDIMIRIHVTIQAGTGMERKGPYAAHKACDAVIQEIREVLKK-KPASEAAREIEYKDVERIGRPRVVIV 355 Thermosediminib...
WP_012101189 272 IIYGKPGCPDPDDIIVRVHAIIQDKTGMERRGPYAAHKACDVIIQEIRKVLKE-TPAGEAEKEEIFDQVKRHGRPRVLLV 350 Clostridium bot...
WP_014015395 268 MYFGHPGCADEGDIIIRCHAVIKRLTGMTRPGPFAAHKCEDYIIQAVRNELKK--YDGEVVREEVCEDLRRKGNPRVVLV 345 Megasphaera els...
ZP_08260822  390 KEIMGQGAMHDNLILPVEPVGTLGAKPNVDLGNLPVMLAPTEVLDGGIHALTCIGPASKETSRHYYREPLVLEAMADEEI 469 Gemella sanguin...
ZP_03292852  370 KEIMGQGAMHDNLILPSEPVGTLGARPNVDLGNVPVVLSPLEVLDGGIHALTCIGPASKEMSRHYWREPLVIRAMEDEEV 449 Clostridium hir...
ZP_09154008  386 KEIMGQGAMHDNLILPVEPVGTLGAKPNVDLGNLPVALSPLEVLDGGIHALTCIGPASKETSRHYFREPLVLEALADDEI 465 Johnsonella ign...
ZP_08128225  364 KEIMGQGAMHDNLILPVEPVGVLGAKPNVDLGNVPVCVSPLEVLDGCIHALTCIGPASKEMSRHYWREPLVLEALHDPEV 443 Clostridium sp. D5
ZP_07758135  381 KEIMGQGAMHDNLILPVEPVGTLGAKPNVDLGNLPVMLNPLELVDGAIHALTCIGPASKEMSRHYWREPLVHAAMRDEEI 460 Megasphaera mic...
ZP_05744835  371 KEIMGQGAMHDNLILPKEPVGTLGAQANVDLGNLPIMLSPLEVLDGGIHALTCIGPASKETSRHYWREPLVEEALKDEDI 450 Lactobacillus a...
ZP_08626045  356 KEIMGQGAMHDNLIMPAEPAGVGGGRHNVDLGNVPVLLSANEVRDGGIHALTCVGPSSKETTRHYFREPLVELMAEDEEI 435 Acetonema longu...
WP_012157913 373 KEIMGQGAMHDNLILPVEPVGVLGGKPNVDLGNIPVVLSPLEVLDGSIHALTCIGPASKENSRHYWREPLVIEAMNDEEI 452 Alkaliphilus or...
WP_013362444 373 KEIMGQGAMHDNLILPVEPVGVIGAKPNVDLGNVPVVLSPLEVLDGGIHALTCIGPASKENSRHYWREPLVIEVMNDEEF 452 [Clostridium] s...
WP_013276441 356 KEIMGQGAMHDNVILPKEPAGVLGGRPNVDLGNIPVVLSANEVRDGGIHALTCIGPASKENTRHYFREPLVNLVADDEEV 435 Thermosediminib...
WP_012101189 351 KEIMGQGAMHDNVMLPTEPAGVHGGRQNVDLGNVPVVLSVNEVRDGGIHALTCIGPASKEDTRHYFREPVLEALAADEEL 430 Clostridium bot...
WP_014015395 346 KEIMGQGAMHDNVLCPNEPCGVMGGQKNVDLGNVPIVLTPNQVRDGSIHALTCIGPATKEMTRHYIREPLVEGLAKDDEL 425 Megasphaera els...
ZP_08260822  470 DLVGVLLVGSPQANSEKFYVSKRVGMTIEAMDIDGAIVTTEGFGNNHIDFASHIEEIGKRGVSVVGMTYSAVQGALVVGN 549 Gemella sanguin...
ZP_03292852  450 DLVGVVFVGSPQANSEKFYVSRRLGMLVEAMEVDGAVVTTEGFGNNHIDFASHIEQIGMRGVPVVGVTYSAVQGALVVGN 529 Clostridium hir...
ZP_09154008  466 DLAGVVFVGSPQINSEKFYVSGRLGMMIEMMDADGAIITTEGFGNNHIDFASHHEQIGMRGVDVVGVSFSAVQGALVVGN 545 Johnsonella ign...
ZP_08128225  444 DLCGVIFVGSPQINSEKFYVSKRVGMMVEMMDVDGAFVTTEGFGNNHIDFASHHEQIGMRGIPVVGMSFCAVQGALVVGN 523 Clostridium sp. D5
ZP_07758135  461 DLVGVILVGSPQANSDKFYVSRRLGQTVESMGVDGAIVTTEGFGNNHVDFASHIEQIGKRGIKVVGASYCAVQGALVVGN 540 Megasphaera mic...
ZP_05744835  451 DVVGVCLIGSPQANTQKSYVSKRLGMWAEAMGLDGAIVTTEGFGNNHIDYGENIEAIGSRGVPVVGITYSAIQGELVTGN 530 Lactobacillus a...
ZP_08626045  436 DLAGVIFVGSPQVNDEKNYVVSRLGAWAEGLELAGAIVTTEGFGNNHIDFAGHIEQFGKRGIAVVGVTYSAYQGALVVGN 515 Acetonema longu...
WP_012157913 453 DLASVIFVGSPQINAEKFYVSERLGMIIESMDLDGVIITTEGFGNNHIDFASHHEQVGQRGVPVVGMTFAANQGALVVGN 532 Alkaliphilus or...
WP_013362444 453 DLAGVVFVGSPQVNAEKFYVSERLGMLVETMDVEGAFITTEGFGNNHIDFASHHEQVGMRGIPVVGMSFCAVQGALVVGN 532 [Clostridium] s...
WP_013276441 436 NLVGVVFVGSPQVNEEKFYVSERLGALVEALGVDGAIVTTEGFGNNHIDFASHIEQIGKRGIPVVGVTYAAYQGQLIVGN 515 Thermosediminib...
WP_012101189 431 DIVGVAFIGSPQVNDEKAFVSKRLGAMTDTMKLDGAIVTTEGFGNNHIDFSYNIEEIGKRGINVVGVTYAAYQGQLVVGN 510 Clostridium bot...
WP_014015395 426 DLIGVVFVGSPQVNDEKLWVSDRLGSLLESLDIDGCIITTEGFGNNHIDFIQHIGQAGKRGIPVVGVSFCAYQGQLVVGN 505 Megasphaera els...
ZP_08260822  550 EYMSAMVDNNKSKQGIENEILSNNTLCKEDAIRALAMLKTQMGGGTIKKAERKWNPNVKLNNVEVI 615 Gemella sanguinis M325
ZP_03292852  530 KYMTHMVDNNKSRQGIENEILGNNTLAPEEAIRIMCMLKNAMSGVEVKAPERKWNPNVKLNNIEAI 595 Clostridium hiranonis DSM 13275
ZP_09154008  546 KYMQNMIDNNKSAQGIENEILGNNTLSPEDAVRALAMLKTVMVGESVKEAERKWNPNVKLNNIEAI 611 Johnsonella ignava ATCC 51276
ZP_08128225  524 KYMTNMVDNNKSESGIENEVLACNTLCHEDAIRALAMLKNAMAGEEVKTAERKWNPNVKGTNVELI 589 Clostridium sp. D5
ZP_07758135  541 KYMGAMCDNNKSKLGIENEVLANNTLCYEDAVRQLAMLKTLLGGGEIKAAERKWNPNVKLNNIEII 606 Megasphaera micronuciformis F...
ZP_05744835  531 KYMDAIVDNNKSKWGIENEVLENNTLCQEDAIRALAMLETKMAGGKIKKPERKWNPNVKLNNIDLI 596 Lactobacillus antri DSM 16041
ZP_08626045  516 KYMDAMIELNEHSGGFESEILADSTICHDDAARALLMLKTKLAGIPIEAADRRWNQTVIEANNKAM 581 Acetonema longum DSM 6540
WP_012157913 533 EYMTHMIDLNKSKLGIENEILSNNTLCKEDAIRAIAMLKAAMANEHVKEAERKWNANVKINNIEIL 598 Alkaliphilus oremlandii
WP_013362444 533 KYMKYMVDNNKSEQGIENEILSNNTLCPEDAIRAVAMLKAAIAEEEVKVAERKFNKNVKENNVDLI 598 [Clostridium] sticklandii
WP_013276441 516 KYMDAMVELNKDPNGMESEILGDNTLTKEDAVRALAMLKAKMAGAEIKPAPKKWDQSVIENNQKLV 581 Thermosediminibacter oceani
WP_012101189 511 KYMDAMIEVNKDKGGFESELLGENTITADDAKRAVLMLKNKIAGVEIEPADRKWSQEVIDENQKIT 576 Clostridium botulinum
WP_014015395 506 PYADAMVEENMDQGGFENDVAGCSCVTKEVAARAIQMLKNKMAGVPIAAAPKKWDNAVINANNKLL 571 Megasphaera elsdenii
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