Conserved Protein Domain Family
bcpD_PhpK_rSAM

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TIGR04479: bcpD_PhpK_rSAM 
radical SAM P-methyltransferase, PhpK family
Characterized members of this family are B12-binding domain/radical SAM domain enzymes that use methylcobalamin as a methyl donor to methylate a phosphorous atom during the biosynthesis of natural products such as bialaphos and phosalacine. These syntheses create an extremely rare C-P-C bond. All members of the seed alignment derive from genomic regions that include a non-ribosomal peptide synthase. Note that a single organism, Pelosinus fermentans JBW45 from Cr(VI)-contaminated groundwater, has eight additional homologs of unknown function that score between trusted and noise cutoffs of this model. [Cellular processes, Toxin production and resistance]
Statistics
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PSSM-Id: 275272
Aligned: 8 rows
Threshold Bit Score: 739.584
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_07302145    2 KHCIVVGYHETDMsgEELQLALEHGGDELPApIRSMLRTKITFGGAHYSYLDALSEVR-NQDRGTDHAYTVSELPSLGTL 80  Streptomyces vi...
WP_003177935   4 KKCMIIGFNDFSF--DDYCQMLDQLAPEAAA-KRDLRLAFVNYEGSRFHALGVLNKTR-ELQGLADLDLNNADFLWPVVM 79  Pseudomonas flu...
WP_007936907   2 IDCLIIGHNDGDF--DAIVKTLHSMGTDHPD-YRDLNLNFIEYNNKAYRALDILDYFYyQNNNDAYRSFHNADLLWNVIM 78  Pelosinus ferme...
WP_004616060   3 HDCVMIGFNDEKM--STIIKRIEPYKDKSAA-YEHMLARSAVVNGQRLKYSEIVRESI-TNSTGMHSDLTIYRMPNMAVH 78  [Clostridium] p...
WP_011396798   2 IDCLIVGTNMPPT--PEHVEMVRSVDNHGGA-WRDLRLAFVEHQGQPYTALDLINHIY-DEAGQSHRQFNNLDFLWPAVS 77  Hahella chejuensis
WP_012787621   4 LDCVVIGYNEGDF--DDYRVMCERTGPGTPE-YQIMSSEHLVVDGGAMPWLEAFSRLR-TRSTGRTDRYHVGEVYNLAAL 79  Catenulispora a...
WP_010982287   4 LDCVVIGYNEGNF--DDYRVMSERAGPSSPE-SQIFRKEHLVVDGRPMPWMDAFSTLR-NRVTGRHDRYHVGEVFNLAAL 79  Streptomyces av...
WP_014315137   5 YDVLLISFTGSNV--SKELERIGRVYDE-----KEVELN-VSFPG--------------------------------ALA 44  Clostridium sp....
ZP_07302145   81 YLVNYLQEQGHPADFVNSYTFEQDQLVKLLAD-NPASVAITTTFYMMPAPVIEIVRFIRRHNPSVPVIVGGPLVDNQCRA 159 Streptomyces vi...
WP_003177935  80 VLGTYLDKHRIAFDYVNLFQKEKDVLAQKLTSgTINAVVITTTLYVMPHPVQEIVDFVRSFAPEVQIIIGGPYISGLFKA 159 Pseudomonas flu...
WP_007936907  79 YLGTYLSRRGFSFDYINLFQFEKDKLREKLEHnNYLTIAITTTIYTTVEPIQEVISFIKKINNTANIIVGGPFIAKQVET 158 Pelosinus ferme...
WP_004616060  79 YCMNYLKKHGMSVGYVNYFNDGREKLKYLIENySPNCIGVSSTCHVEPAPIREIVDYIRSIDPSIVIVVGGPFINSINFE 158 [Clostridium] p...
WP_011396798  78 YLASFLRRRGFTVDWINLFQQEKEEMRRLLRSgQVRTVAVTTTLYVSPQPMIEVIKFVREHS-DAHIIVGGPYISGQAEV 156 Hahella chejuensis
WP_012787621  80 YLTSYLRRHGLRAEPVSLFSAERDRLAALLAE-RPAVVAVTTTFYVNILPVIAVVEFIREHAPDSHIVVGGPLVDNLCLS 158 Catenulispora a...
WP_010982287  80 YLTSFLRRRGVSAEPVSLYSGERDRLADLLAQ-RPTVVAVTTTFYVNILPVVPIVEFIREHSPDSHIVIGGPLVDNLCLN 158 Streptomyces av...
WP_014315137  45 HLGTKLIRNGYTCDYLSSFEDFKDELKEKLTTnDYKYVGISTTHITDFESLEKIAAFVKKYKPSATIFVGGPFIVAKTKQ 124 Clostridium sp....
ZP_07302145  160 GRDDRLNRFFDRVGADYYVWESQGEAALAGVVGAIVDGD-VPTEVPNVFLRSATg---EWKLTRKRPEANDLNACSVRWN 235 Streptomyces vi...
WP_003177935 160 HDRELLGDYLSVLGGDIYINSNEGEDTLRQVLEALNQNR-SVIGLSRTAVRDGD----TWVFGTDEPEYNELKENFVNYK 234 Pseudomonas flu...
WP_007936907 159 IDISNLKLLFGYIGADYYILSREGEQALADLLYALKKTV-TISNIKNISYKKGK----DYIITKMENEINSLEDNMIDYT 233 Pelosinus ferme...
WP_004616060 159 YSTPQQNYLLQSIGADIFIHERQGEDTLFQICTELRKDKpDLTKIPNIIYKDG-----HYKRTVKVPENICLDDDPIKEF 233 [Clostridium] p...
WP_011396798 157 RNADELASLFEYLGADTYVISSEGEQALAHIISALQKGE-PLNGVANLAIRDPKsllrPFSRTPVETEYNPLEENPIDYG 235 Hahella chejuensis
WP_012787621 159 GITDTVQDLCHAMGADSYIQESQGEHSLAQLCQAVQAGA-DLDAVDNLLHCPDG----TWVRTRRRPEANNLDECSIDWS 233 Catenulispora a...
WP_010982287 159 GITGTVQDLFDAMGADSYVQESQGETTLARLALALKEGR-DISAVDNVIHCTDG----MWQLTRRRPESNDLDDSSIDWS 233 Streptomyces av...
WP_014315137 125 FTLRELQLLYKKIGADIYFNSYAGADKLIEILEALNGKR-ELSDIKNITFRSGN----QFIKNENETEYESLEDCNLDWK 199 Clostridium sp....
ZP_07302145  236 RFDPTVLGPTLSTRTARSCAFSCAFCDYPERAGALTLADLSTVERELEELADMG-VKRVAFIDDTFNVPMRRFKDLCRML 314 Streptomyces vi...
WP_003177935 235 LFEPRGIGRFLSTRTAKSCPYSCAFCGFPQRAGKYRYLSTRDVERELDAVKAIGtVDTLTFLDDTFNVPKQRFREIMQMM 314 Pseudomonas flu...
WP_007936907 234 LFSKKDIGETINIRTSKGCPYSCSYCGFPLRAGKYKCLDVDYIIKELDQIEKIGtVRNIFFMDDSINVPKVRFKELMLAM 313 Pelosinus ferme...
WP_004616060 234 TFYENHPKPPVYMRCSISCSLCCSFCRYPILGGEPMFMKVESIEKNMNYIHSLG-VKSIVFVDDSLNVPLDRFKDMLRMM 312 [Clostridium] p...
WP_011396798 236 LFPPEQLSQFISLRTAKSCPYSCAFCGFPQRAGAYKTLAPDLVEQELDRIAALGnVDTLTFLDDTFNVPKKRFKEILRLM 315 Hahella chejuensis
WP_012787621 234 GFTPAEIGTTAQLRTARSCAFKCSFCDYPSRAGALTTASIDTVRAELRALAELG-VRNVVFVDDTFNVPPKRFKDMCRMM 312 Catenulispora a...
WP_010982287 234 GFSPELIGVTAQLRTARSCAFKCSFCDYPSRAGALAAASVDTVRKELRAMAELG-VKNIVFVDDTFNVPPKRFKEICRMM 312 Streptomyces av...
WP_014315137 200 LFGDQNL-KIVPIRASISCPYSCTFCAYPIHSGKHQIRTIDNVEQELNQIYEMGkTQIVHFIDDNLNVPTERFKDMLLMM 278 Clostridium sp....
ZP_07302145  315 VRRDFGIEWFSYFRCGHArEPDVYDLMYDSGCRGVLLGIESGDDQVLLNMDKRATTAHYQYGIEQLKARGIFTHASFVIG 394 Streptomyces vi...
WP_003177935 315 IDNQYNFKWNSFYRSDQG-DPETIELMARAGCEGVFLGIESASDKMLALMRKTSRRKNYEQAISAFRSVGIATHASFIIG 393 Pseudomonas flu...
WP_007936907 314 IKKDYSFKWNCFFRCDSS-DAELIKLMKEANCEGVFLGLESANEQVLKNMNKTSRKSDFLKAIPVFKKAGLAVFVSTFTG 392 Pelosinus ferme...
WP_004616060 313 IRNKYNFKWYSFFRISHS-DEETYELMAKSGCGGVILGVESGNDTIRKNMDKRVSTEQLVWGIGQLNKYGIVSHASCMVG 391 [Clostridium] p...
WP_011396798 316 IRKQYGFRWNSFYRSDQG-DYETIQLMREAGCEGVFLGIESGSDAMLKNMNKTARRRNFAEAIPQLQAAGISAHASLIVG 394 Hahella chejuensis
WP_012787621 313 IEEDLGLNWYSYFRCSNArDDEAFDLAAASGCAGVFLGIESGDGDVLAAMHKLAQDSEYRSGIARLKERAITTFASIIVG 392 Catenulispora a...
WP_010982287 313 IEEDLGLRWYSYFRCSNArDEEAFDLAAESGCSGVFLGIESGDTEILANMHKLAQDSQYRVGLERLNERDITTFASIIVG 392 Streptomyces av...
WP_014315137 279 KRNQYNFKWFSYVRCQFI-TDELAQLMKETGCVAVILGLESGNQEMLNRMNKKTTVEDLTRGISILKKHGIATMGFFFVG 357 Clostridium sp....
ZP_07302145  395 FPGESPQTVQNTIDFINRAGPDTFAVNHWYYMHATPIHVRAPQFELTGNGHTWSHRSMNSREALEAADQIFDSVVNAAWM 474 Streptomyces vi...
WP_003177935 394 FPGETIDTVQESLDFIETFRPDTFRAQVWYCDPLTPIWNDREKYGITGSGFDWAHDTMDSELAASITERFFLTAQNSTWL 473 Pseudomonas flu...
WP_007936907 393 FPGETYKTFQETIDLLRETEPDFYRPQLWFCDPVTPIWNQREKYGLKGSNFSWKHSTMNVKEACDLNEEAFLTVDKTVWV 472 Pelosinus ferme...
WP_004616060 392 FPGETEKTARDTIKFIEEAKPTFYDLQVWFFENAVPISKERDYYNLEGYGYSWSHKDMDYESAGKIVLDGIRNIKNSYFM 471 [Clostridium] p...
WP_011396798 395 FPGETEDTIRETQSLIEQSKPDFYRAQLWYCDPLTPIWKNRQEYDLEGNGFSWRHRTMTSEAACDWVERLFFDIRNSTWL 474 Hahella chejuensis
WP_012787621 393 FPGETEKTVRNTIDFLNETAPDLWRAQAWWANPRSPVFANKDLWSIQGEGYTWSHHTMNSAQAAAYTDEMFAAVTESVWL 472 Catenulispora a...
WP_010982287 393 FPGENARTVSNTVDFLNETKPTFWRAQAWWANPRSPVYQNKEALGIEGEGYSWSHATMTSSEAADLTDSMFDRVTGSTWL 472 Streptomyces av...
WP_014315137 358 FPGETEESVNDTINFINNAAPDFYAVVPWYYDITTPISKQKEAYNLVGNNYQWSHATMDYSKAEELCNEFPKRITNSTIK 437 Clostridium sp....
ZP_07302145  475 PVNGLDFWGVPYLLGKGMDRSEIVRFLELAKPLT 508 Streptomyces viridochromogenes DSM 40736
WP_003177935 474 PQFGFEQWSLFYLHRQGMEQSNILGYLDGFNAAV 507 Pseudomonas fluorescens
WP_007936907 473 PDPGYNFTSIYYMKQRGMSIGKQKKFLKAFNDVV 506 Pelosinus fermentans
WP_004616060 472 PSLSFNLWSLAYFLTQGTQISEFMELSKIFKDVV 505 [Clostridium] papyrosolvens
WP_011396798 475 PQHGFEQWSTFYLQRRGYTRQQVIDYVALFNSTI 508 Hahella chejuensis
WP_012787621 473 PLYDFDFWSLPYLDGKGVKAAELIALLRTSQQWM 506 Catenulispora acidiphila
WP_010982287 473 PLYDFDFWSLPYLAGKGVGVGELTPILQLSEQIM 506 Streptomyces avermitilis
WP_014315137 438 TIQT---HHVFEMLAQGFELDEVKSILKNIGNEV 468 Clostridium sp. BNL1100
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