Conserved Protein Domain Family
rSAM_vs_C_rich

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TIGR04463: rSAM_vs_C_rich 
radical SAM/SPASM domain protein maturase
Members of this family are probable protein/peptide-modifying radical SAM/SPASM domain proteins. The majority of members of this family seem to target Cys-rich repetitive regions of large proteins rather than of bacteriocin-sized small precursors. This arrangement suggests the modification target may be multifunctional, with the C-terminal domain behaving like a bacteriocin but other parts of the same precursor serving an immunity function, as occurs for the halocin C8 precursor.
Statistics
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PSSM-Id: 275256
Aligned: 3 rows
Threshold Bit Score: 794.47
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Hoch_1624   9 YNIFVPLVNERVLAYNSLSGGMALWEDHDQAIYQRVIDGDPl----ERLhpv----vqQLIQGGFLVDDHVDELAVLEGQ 80  Haliangium och...
EEE35649        2 FNVFVPLRGGKALLYNTLHRGLSCLNPEQVQKYRSLEQNRLcgdaaETL---------SMSSQGFAVPADRDELLETQKL 72  Rhodobacterace...
jgi:Mvol_0696  10 YNI-INEVNEGKVVYNTLSGICSLLEEEDLKIFDNIETKKL-----DNMtpieidildNLLLNNFIVPKDIDETVVFEEK 83  Methanococcus ...
jgi:Hoch_1624  81 YQAHRFDEGAMILTIAPTLACNFACDYCFQGQDKPKESMSEGVQDAILALVEQSADTIKQLHVAWYGGEPLARREVIESL 160 Haliangium och...
EEE35649       73 YGQSRFNDSHLQLVVAPTLGCNFACDYCYQGLDKKHGKMTEDTRQKVLDFIDTNHKNLQSLEVHWYGGEPLNDRQSIYAL 152 Rhodobacterace...
jgi:Mvol_0696  84 YNSMRNNQENLIMTVVPTLNCNFECNYCFQGKLKDNKVMSEEVQDGIFQLIQNYSNNLRNVSLTWFGGEPTIAMNVVRRL 163 Methanococcus ...
jgi:Hoch_1624 161 SDRFIALCDARGIKYDASMVTNGYFLDGETAKSMYVRRVKGVQVTIDGAPHYHDKRRVLL-SGRGSFDRIVENLCEVVEA 239 Haliangium och...
EEE35649      153 SDMLIKYSTERGLRFFASMVTNGYQLTGEVARDLEKRGLAWAQVTIDGAKSIHDTRRILL-SGKGTYDKIIRNLKEIVAQ 231 Rhodobacterace...
jgi:Mvol_0696 164 SDKIIPYCDKNGINYTSMIVSNGYTCTPELMGELYARRVKTVQITLDGAKEVHDSIRYLKgSKKGSFDKIISNIRSYTDI 243 Methanococcus ...
jgi:Hoch_1624 240 TPMRISIRVNIDHRNADQIRGLIDHLDERGLSRRdTFAMYFAPIEAMTEGCHVIQPHTLTKRDYGQLEADLCRYAHDKGL 319 Haliangium och...
EEE35649      232 TNIKIVLRCNVDNRNIDQAYDLVDDLAAQGFSNS-NVTIYFAPVQTMTEECLSINEFVEGKRSYAEKELKLMRYAADRGL 310 Rhodobacterace...
jgi:Mvol_0696 244 YPIFTTIRVNVDQNNYKSIYRLIDQLADSGLSNK-NVSIYFAPIISSNSLCHHISNQTLELSDFAGIESELRRYAHSKGL 322 Methanococcus ...
jgi:Hoch_1624 320 APLPYPPRFHGTCAAVRPKGLVIVPTGDIHKCWDTVTYPQHAVGTVF-DVAALADSDKAKAWAQWTPFDNDTCRNCKILP 398 Haliangium och...
EEE35649      311 LKFDLPGVFNSICVGVKQNGWVIDPSGNFQKCFDTVQREDLKIGDLTqSPDELANSPYLMMWRSWTPFQLPTCRSCKLLP 390 Rhodobacterace...
jgi:Mvol_0696 323 CGTSLPMQYMGLCGATRPKGFVVTPVGNIHKCWETVSYLDKSVGNVL-STPPLNE--NVKLWDEWSPFNYEECRNCIILP 399 Methanococcus ...
jgi:Hoch_1624 399 NCSGACAYKFLHAGDTRGEAAVLPCPSWKYNIKERLVLRAEGSGVITADD 448 Haliangium ochraceum DSM 14365
EEE35649      391 SCGGSCAYKFIHRDKTEGDDTQLPCPSLKFSIAERLFEFAIDQGLVTHAD 440 Rhodobacteraceae bacterium KLH11
jgi:Mvol_0696 400 NCVGFCPYKFLYHSEFMGNSGNLPCPSLKYNINEKIMDHVKLKGLIKNED 449 Methanococcus voltae A3
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