Conserved Protein Domain Family
lept_O_ant_chp1
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TIGR04441: lept_O_ant_chp1 
surface carbohydrate biosynthesis protein
Members of this protein family occur only in a subset of Leptospira species, and in those species occur only in O-antigen biosynthesis regions. Members average about 375 amino acids in length. The function is unknown. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
Links
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Statistics
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PSSM-Id: 275234
Aligned: 5 rows
Threshold Bit Score: 497.758
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_010575209  15 FFFKSEKEWTFPKKSDLVFY------DFVGYEAFESYIQVYNPTILYIRGEKLNVPIFLAAFFKGNIGLQGYINEFIRSV 88  Leptospira kmetyi
WP_002741071  10 FVWNAQKIWVKPKRAPVLIF------DRCGSDNFFFYLDERYVSILDVRGESFNFYILLKCFLTFQISKKHYYAYYINSV 83  Leptospira borg...
WP_000668087  12 RFFKGRMNWKKPRNASLLIY------DQVGAELFFEYIKNSEIEVLETRGESVNLYVFLKVLLTGKVSLNAYIRQYIQFV 85  Leptospira
WP_004477695  15 FFLRSKKKWRFPKKGILLFY------DSVGYDAFESYISCYNPVVLHVRGEILNIPIFLLSVLKGSIGWQGYINTFIHYV 88  Leptospira sant...
WP_013694744   2 HFFKKKLIFSFPKKKEILLYinshdcIKNKESFFHETLDRNTYEVVDQNLYFINFWILLLTFLKFNFSSMSYKCTMIKWV 81  Candidatus Pela...

WP_010575209  89 KPKLVLTYIDNNPKFYELKKSHPDIITMFVQNGFRGEIGDVfGYLTPQEN-YNVDYMLTLGVDIGEKYSGYIRGKSVSIG 167 Leptospira kmetyi
WP_002741071  84 RPKVVMTFIDNNWPFYSLKKMCPTITTVLVQNGLRANLDEQ-FGSEISKD-SLVDFMFLFNKNIGAIYSKNLKGKIFGSG 161 Leptospira borg...
WP_000668087  86 SPSVIITFIDNNKNFYSLKQIFPKIIFIFVQNGVRGEQADIfDTLIPDPN-YYVDYMLVHGSHIGKKYRDYIQGESIVTG 164 Leptospira
WP_004477695  89 SPRLILTFIDNNPKFYKLKELHPNAITMFVQNGFRGEIGDVfGYLNRKEN-YNVDYMLTFGSDIGEKYSQYVKGKFVPIG 167 Leptospira sant...
WP_013694744  82 RPKFFITNVDNDVSFYKLKPLFPNIIFVAIQNGWRGKTNDIfGSHDFKNDpLHCDYIFVFNEDVSDTYRKFFNTKTIVSG 161 Candidatus Pela...

WP_010575209 168 SFKNNKVPKKKSNpvsKINSILFISQYikR---PENEKEPFYVeANGSVYYWEQFYETELILLPFLKRYCFEKNLSIKVC 244 Leptospira kmetyi
WP_002741071 162 SFLNNYHSVSNQN---KDKSILFISQY--R---PKNDSGVFFY-VNGRSISYDEFYLTEEFLLNKLSAYCDRNGFRFVIK 232 Leptospira borg...
WP_000668087 165 SLKNNKVFKKHQQv--EKGSILFISQYqgE---PLDDETLFYIdPKGRKFTCDQFFTAEKIVLGFLNTYISRNRLALTVC 239 Leptospira
WP_004477695 168 SFKNNIISKKNRKs-lKNDVVVFISQYisP---PKKNGEPFFLePNGSKYYWEQFYEAEYLLLPFLKEYCFNKNFSIKIC 243 Leptospira sant...
WP_013694744 162 SMIANTLKLFDPVi--KKKKISFLLQFrtRkyyPFRSKPK----KNNKNYLWDDLFLNTSIILKYLGEYCHLNNIELNVI 235 Candidatus Pela...

WP_010575209 245 GRTKKNDP--DEFNFYKNYFDGLDWAMTSHESLLSSYELIDSAPVTVFVDSTLGYEALARGKKSAAFTSRcrSLKNDSYR 322 Leptospira kmetyi
WP_002741071 233 ASNSKDVE--DQYKFFKEKIGSGNFDFLTQDKSLSGYNVVDQAQVIVGIDSTLLYESIARGNRTAFFTLR--NAFDPSRK 308 Leptospira borg...
WP_000668087 240 GRSDNQME----YSFFESYLKDSNWKFLSKRASQESYETVDKYETIVFIDSTLGYESFGRGKKCAAFPIRdiTMQNDATK 315 Leptospira
WP_004477695 244 GRSKTYDA--NEFNFYKSFFEGLDWSMATYDTPTSSYELIDSANLIVFIDSTLGYEALARGIKTAAFPIRcrSLKNESYK 321 Leptospira sant...
WP_013694744 236 GRSRHGHEqiEENNFIKEYIHH-DFKYIPRVNKYSSYNATADSKVVVSINSTLTFELMALGKRVVNINTRskIYQDIEDS 314 Candidatus Pela...

WP_010575209 323 FGWPGKLPDNGPFWTNDLDVKAFKRVLDHTIETSEELWQvELKKSGFARVVDFDPNNSRFRDLLDQIL 390 Leptospira kmetyi
WP_002741071 309 FAWPADYPESGPFWTNKMDVSEFERVMDYITQVSDEDWE-AARLKYVKDLMEYDPGNSQFISLMKELN 375 Leptospira borgpetersenii
WP_000668087 316 FGWPGDYPDNGPFWTNKSEETEFCRVMDFVLNISEKDWE-SIHQQFAPGIMKFDPGNSIFLNLLKKLS 382 Leptospira
WP_004477695 322 FGWPGYFSDHGPFWTNDQDSEIFKKILDHLTEISSEDWKrELHQSGFFRIMNFDPENLKFIDLLRKIL 389 Leptospira santarosai
WP_013694744 315 FGYPAIKVREGCFWTESLDKEKIFNLINFAINSTEIEWK-EKAGCYTSKLMKYDYKNTLFKNFLKKYE 381 Candidatus Pelagibacter sp....
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