Conserved Protein Domain Family
small_Trp_rich

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TIGR04438: small_Trp_rich 
small Trp-rich protein
Members of this bacterial protein family average 80 residues in length, and average nearly 6 Trp residues (two of which are invariant) in the first 45, which are strongly hydrophobic. Past this region, the protein is highly charged, with large numbers of Lys, Arg, Asp, and Glu residues. Members usually are divergently transcribed from a gene encoding a c-type cytochrome.
Statistics
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PSSM-Id: 275231
Aligned: 32 rows
Threshold Bit Score: 72.3749
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_07043619    1 MYLLGLAIVLSLLKLAQIGPVAGWSWWPILGVYGAAAAWWAWAD-ASGYTKRKAMEKMDQRKKERIERQKQAMAPGQ 76  Comamonas testoste...
ZP_08401509    1 MWFLVIGLVLLGLSLAGIEPVSEWHWAWIALPFGAAAAWWAFAD-ASGLTRRRAEEKIEERKRARRQRDIDALGLNP 76  Rubrivivax benzoat...
ZP_09752358    1 MFFVLVGVLLLVLKLTHIDPVATWSWLWVLLPFGLAVVWWQVSD-AMGLTRQREMDKMDARKEARRLKSMEALGLNT 76  Burkholderiales ba...
ZP_10567026    1 MWFLALGLLGLALKYLEVGMVAGWSWWIVLSPFAMAVAWWAWAD-SSGYTKRRVIEREDRRKQDRIDRQKTNMGMKT 76  Variovorax sp. CF313
WP_011802253   9 MYFLIIGVLGLVLKYLEIEPVASLNWWLVLSPFAAAVAWWAWAD-GSGYTKRKEIEKMDDRKQKRLDKQRAAIGLLP 84  Polaromonas naphth...
WP_013106854   1 MAFVILGLIFIVLKLLSIGPVASWSWWWVLLPLALAFIWWEIIDpMFGISKKRAMGDMADRQQARRQKYRESLGLGG 77  Thiomonas sp. 3As
WP_012346519   1 MFLVFVGVVLVLLSWTGIGPTADWPWWALVLPFCLAVLWWAWSD-SSGRTRAKQDQKFQKRILERRARSIEALGLNr 76  Leptothrix cholodnii
WP_012747638   1 MLFLLLGLLGVGLKYFEVGMVAGWSWWIVLSPFAMAVAWWAWAD-SSGYTKRKVVEREEARKQARIDRQRSNMGLPG 76  Variovorax paradoxus
WP_013541815   1 MWFLLLGILSLALKYFEVGMVAGWSWWIVLSPFALAVAWWAWAD-SSGYTKRKVIERENRRKQARIDRQKTNMGVPT 76  Variovorax paradoxus
WP_014428069   1 MWFLVIGLLLLVLYLAGVEPVSAWHWIWIALPFGAAALWWTFAD-ASGLTRKRAEEKIEARKRARRQRDIDALGLNP 76  Rubrivivax gelatin...
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