Conserved Protein Domain Family
rSAM_desII

?
TIGR04426: rSAM_desII 
TDP-4-amino-4,6-dideoxy-D-glucose deaminase
Members of this protein family, including DesII, are radical SAM enzymes that deaminate TDP-4-amino-4,6-dideoxy-D-glucose to TDP-3-keto-4,6-dideoxy-D-glucose. This is the fourth step of the six step pathway in Streptomyces venezuelae for synthesizing D-desosamine, or 3-(dimethylamino)-3,4,6-trideoxyglucose, a precursor for many macrolide antibiotics.
Statistics
?
PSSM-Id: 275219
Aligned: 7 rows
Threshold Bit Score: 835.551
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
AAS79444      18 PGADLPAAVHTVHRALVSDGRVGVDEGPTVARRLVRLAERYGNHPFTPLEEARRMLDVDRASFGRLLGLFGRVPELRHAV 97  Streptomyces bi...
BAC57034      18 PHADLTAATDDLRHRLTAVVGLTEPDAATVAAPLVRLAVIFGNRPFTLLEQARDELRVDRPAFRRLLDIFSQVPELRTAV 97  Micromonospora ...
AAD55457      19 PGGNSAAAA-ALRPLIEEDAPGTGLEPDRLAEHLIALARRYGTEPFTPLESARRGLGLDRATFARVLAVFHRTPALRTAV 97  Streptomyces an...
AAU93790      13 PGVDHHTARDLVAERL---RSMGEDGVEAKAAHLAALVSHYGAHPFTPLEQMRQRLGLDRDEFAAVLEVFDRVPELALAV 89  Aeromicrobium e...
ZP_09371115   13 RRSDPITASDVYRTLLETGRKEDAGKLESHSEHLVKLLNIYGKKPFTRLSDARSQLGLERGEFTSVLEMAASTPVLRLAV 92  Actinomyces sp....
WP_009950892  20 PDVDRRAVVRALSSEVSRVTGAGDGDADVQAARLADLAAHYGAHPFTPLEQTRARLGLDRAEFAHLLDLFGRIPDLGTAV 99  Saccharopolyspo...
WP_011113120  19 PGGDRAAAIEAVRIRLGQ-LGDTGDGARQRAEHLVDLATRYGSHPFTTLEEARHLLGVDRPAFAALLGLFHRVPELSTAV 97  Streptomyces ro...
AAS79444      98 ENGPAGKYWQNTLLPLERRGVFDAALAHKPAFPYVVGLYPGPSCMFRCHFCVRVTGARYDPSALESGNAMFASVIDEIPA 177 Streptomyces bi...
BAC57034      98 ESGPAGKYWRNTVLPLERRCAVEAALRHEPVFPRIVGLYPGLTCMFRCHFCVRVTGARYEASLLDSGTALLASVIDELPR 177 Micromonospora ...
AAD55457      98 ERGPAGMYWTNTILPLERRGVLDAAVRGEPAFPYSVGLYPGPSCMFRCHFCVRVTGARYQQSALTDGNAMFASLIDRMPT 177 Streptomyces an...
AAU93790      90 EHGPAGKYWSNTIKPLNEAGALDAAVERRFAFPVSVGLYPGPTCMFRCHFCVRVTGARYAADSLTPGNEVLASVIDEVPN 169 Aeromicrobium e...
ZP_09371115   93 TDDVAGRYWTDTILPLEAKGVFDAVLENKPTYPSVVGLYPGPTCMFRCHFCIRVTGAKYGSDNLMPGTGSLIDIIDEAPV 172 Actinomyces sp....
WP_009950892 100 EHGPAGKYWSNTIKPLDAAGALDAAVYRKPAFPYSVGLYPGPTCMFRCHFCVRVTGARYEAASVPAGNETLAAIIDEVPT 179 Saccharopolyspo...
WP_011113120  98 QRGPQGKYWTNTILPLERTGALDAAVHGRPAFPYSVGLYPGPTCMFRCHFCVRVTGARYETSALKAGNAMFASVIDEVPE 177 Streptomyces ro...
AAS79444     178 GNPYAMYFSGGLEPLTNPGLGALSSRAAARGLRPTVYTNSFALTERTLDRQPGVWDLHAVRTSLYGLNDEEYEETTGKRA 257 Streptomyces bi...
BAC57034     178 DNPDATYLSGGLEPLTNPKVGTLASRAAARGQRVTIYTNAFALTDQTLRHQPGLWDLHAVRVSLYGLDDEEYEATTGKRK 257 Micromonospora ...
AAD55457     178 DNPHALYLSGGLEPLTNPGTGDLVRRAAARGFKLSLYTNSFALTRQTLDRQPGLWDLYALRTSLYGLSEDDYVATTTKKG 257 Streptomyces an...
AAU93790     170 DGRTTMYMSGGLEPLTNPGLGELITRAANRGLDLTMYTNSFALTDATLSRQPGVWDLGALRTSLYGLNDEEYEETTTKKG 249 Aeromicrobium e...
ZP_09371115  173 DDPNRFYISGGLEPLTNPNIGKLATHASLKGFNIMLYTNLFALTEQTLKRQPGIWNLGAIRTSLYGLSDEEYQQTVGKSR 252 Actinomyces sp....
WP_009950892 180 DNPKAMYMSGGLEPLTNPGLGELVSHAAGRGFDLTVYTNAFALTEQTLNRQPGLWELGAIRTSLYGLNNDEYETTTGKRG 259 Saccharopolyspo...
WP_011113120 178 TQPSTVYFSGGLEPLTNPGLGELAARGGRRGLDMTLYTNAYALTDRTLERQPGLWSLHAIRTSLYGLSDEEYEATTTKPR 257 Streptomyces ro...
AAS79444     258 AFGRVRANLRRFQQLRSERESPIRLGLSYIVLPGRVHRLLDLVDFIADLNEAAPDRPVDFLNVREDYSGREDGRLFEAER 337 Streptomyces bi...
BAC57034     258 AFERVRANLRHFQKLRAERGSPVRLGMTYLVLPGRAARLLDLVDFIADLNEAAPDRPIDFLNVREDYSSRPDGALSPDER 337 Micromonospora ...
AAD55457     258 AFQRVKDNLTRFQALRRERRRPVRLGLNYIILPGRAGRLTGLADYIGDLNDGGPDRPVDFLTLREDYSGRPDGKLAPEER 337 Streptomyces an...
AAU93790     250 AFSRVKANLQRFMHQRQERGSDLRLGFNHIILPGRTGRLIDLVDFIAELNESSPDRPLDFVTVREDYSGRDDGRLDEQER 329 Aeromicrobium e...
ZP_09371115  253 AFSRVQNNLVQILRMRDKEESNLRLGISYLILPGRVRRLDSLLSFLRDIRDASGGTGIDFVSLRQDYSNRPDGKLRHSER 332 Actinomyces sp....
WP_009950892 260 AFERVKKNLQGFLRMRAERDAPIRLGFNHIILPGRADRLTDLVDFIAELNESSPQRPLDFVTVREDYSGRDDGRLSDSER 339 Saccharopolyspo...
WP_011113120 258 AFGRVRENLGAYMERRAEHGAPTRLGLNYIILPGRADRLMDLVDFVAGLDERSPGRPLDFVTVREDYSGRDDGRLAADER 337 Streptomyces ro...
AAS79444     338 AELQEGLLAFEEAVSRRTPTLNIDYGYALHSLKTGADAELLRIRPGTMRRSAHPQVSVQVDLLGDVYLYREAGFPDLTGA 417 Streptomyces bi...
BAC57034     338 AELRDSLGRFEARALDRAPTLSIDFGYALESMRMGMDAEMIRIRPETMRPSAHPQIAVQVDLRGDVYLYREAGFPDLAGA 417 Micromonospora ...
AAD55457     338 VELEHGLAAFEERIRTRAPSLHVDYGYALQSLRLGVDAELPRIRPETMRPTAHPQVAVQVDLLGDVYLYREAGFPGLQGA 417 Streptomyces an...
AAU93790     330 DELLHGLDAFMEYAERHTPGMTIDLGYALESLHRGVDAELLRIRPDTMRPTAHPQVAVQVDLLGDVYLYREAGFPDLDGA 409 Aeromicrobium e...
ZP_09371115  333 HELIERLGAFDEVVSAEFPSLYVDYGYALSSMLLGQDAQLPHIAVSEMRPTAHPQVSVQVDLLGDVYLYREAGFPGLEGA 412 Actinomyces sp....
WP_009950892 340 NELREGLVRFVDYAAERTPGMHIDLGYALESLRRGVDAELLRIRPETMRPTAHPQVAVQIDLLGDVYLYREAGFPELEGA 419 Saccharopolyspo...
WP_011113120 338 ARLRDALRDFTAYARERTPSLHIDLGYALESLRSGVDARLPRITPAAMRGSAHPQIAVQVDLLGDVYLYRESGFPGLAGA 417 Streptomyces ro...
AAS79444     418 DRYVAGRVGPGTSLTEVVERFVDDGRLIAPHAGDEYFMDGFDQVVAARLNQLEADVVAGWEDARGFLR 485 Streptomyces bikiniensis
BAC57034     418 DRYIAGRIGPDTSLAEVVRNFVASGRRIAAQPGDEYFMDGFDQAVTARLNQLTTDRADGWGDARGFLR 485 Micromonospora griseorubida
AAD55457     418 ERYVAGRLTTGTELEEVVRRFVTEGRQVAPRPGEEYFLDGFDQTVTARLNQMETDIADGWAEHRGFLR 485 Streptomyces antibioticus
AAU93790     410 HRYIAGRVTSDHSLHDVLREFVESGREVEPAPGDEYFLDGFDQSVTARLNQLDQDVADGWGRFRGLVR 477 Aeromicrobium erythreum
ZP_09371115  413 KRYVCGRVGKDTGLGKVVETFVRERHEIQPRDGDQYFLDGFDQVVTARLNQLSDDLADGWGEYRGFLR 480 Actinomyces sp. oral taxon ...
WP_009950892 420 TRYIAGRVTPSTSLREVVENFVLENEGVQPRPGDEYFLDGFDQSVTARLNQLERDIADGWEDHRGFLR 487 Saccharopolyspora erythraea
WP_011113120 418 DRYIAGRVTPDRSLHDVVRAFVESNPHIEPRPGDEFFLDGFDQVVTARLNQMEQDVADGWGAYRGLLG 485 Streptomyces rochei
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap