Conserved Protein Domain Family
casT3_TIGR04423
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TIGR04423: casT3_TIGR04423 
CRISPR type III-associated protein, TIGR04423 family
Members of this protein family occur only in species with CRISPR systems, in the context of type III systems that resemble type III-A (MTUBE) and III-B (the RAMP module). It occurs in several species of Prevotella, Helicobacter, Campylobacter, and Bacteroides.
Links
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Statistics
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PSSM-Id: 275216
Aligned: 10 rows
Threshold Bit Score: 126.333
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
ZP_08578595   10 EKYEGYLWMSDsTEPVVLDREPLPE--DKISSPNpFVVEAELYDGanLCSFSVHHAGNEIICNRFQLtlDDRTSGH---- 83  Prevotella mult...
ZP_04809182   24 KNLEGYVNMSD-DGVEIFDELKKWE--DLHNGKN-FILEAGFSDH--QKSIKINFINGKFYVLEVDL--SQIPSEY---- 91  Helicobacter pu...
ZP_07805403   36 ESFEGYIQLSDsKDFIILDNEPLPQweALHNGKN-FIHQMCLYSPttQRSINATQINNGFNVLDKNL--ADFKKSA---- 108 Helicobacter ci...
ZP_09551095   16 LNFEGYLWLSNeAAPRRINKINAAEyeKDGQPLNpFIREAYLYDVdnNVSVAVRHVPGRYLINFFDLkkLPEDFE----- 90  Caldithrix abys...
ZP_06421175   13 LCYEGCLWMSNeNKPRIFVPAAMIDr-TLLEGLNpFVAEGYLYNKeqGVSISIKSPNGRPCAHRFLVnaADFHSKE---- 87  Prevotella sp. ...
ZP_08136499   10 QPYEGYLWMSNeNHPQVFHPESLIDr-QLFEGHNpFVAEGYLFNHekGISISIKYVDGRYRIYIDKVkpSDFNSKD---- 84  Prevotella mult...
ZP_08673166   11 LPYEGYLWISNeNNPHVFCSETKIDa-QLFKKLNpFIAEGYLYNKetRKSISIKYIDGQYHIYETEVkpTDISNED---- 85  Prevotella nigr...
ZP_18267983   20 QKCEGYLWWSNrQKADHYKEVPAWP-----KGLHpFVVEGAFYLKeqDLSLSIRFLNGAYEVTAIDLgaAVLVNDEqltt 94  Saprospira gran...
WP_014546244   8 EQCQGYIWKSDaDKPQVFNGCACNL--VLDDSANpFVLEAMLYDAqtQDSYMIKYVDGRHLIQEYNL---FNKFDD---- 78  Fibrobacter suc...
WP_014223676   7 STYQGYLWYSDkDQPKVLNNVD-SEi-TLDETKNpFVIEGQLFDG--KRSISIKYVDGKYIVKKYVL--AELPKED---- 76  Tannerella fors...

ZP_08578595   84 ---NEERVFKSHHFKDHQELh---fIDCWEPQSDELCqpegeDPM--------DVLRFTRRIFVGFHP 137 Prevotella multisaccharivor...
ZP_04809182   92 ---KNENCFLVRGDSRIAKI-----TQVWEDVKNQEC-----LGF--------ESLELKYLFFSGFGV 138 Helicobacter pullorum MIT 9...
ZP_07805403  109 ---KSEVEFLVNAQAHKRNIsqikiTQIWQEVADELC-----CDF--------NVLMPTFTLFSGFTK 160 Helicobacter cinaedi CCUG 1...
ZP_09551095   91 ---ITEQKFLANKKIGKKLIf----KEIWAPESDDNC-----EGF--------AVLRKKVTVFCGIEI 138 Caldithrix abyssi DSM 13497
ZP_06421175   88 ---VTPVEYPAHRMGGNRLLf----LRYWTAKPDGAC-----LDM--------PVLTLDKMVFVGFKK 135 Prevotella sp. oral taxon 3...
ZP_08136499   85 ---TNRLCYLTQRMDDSDALwa-efLRYWTETPDPAC-----HSM--------NVQEVEKELFVGFKT 135 Prevotella multiformis DSM ...
ZP_08673166   86 ---VDKIEYLTLRMSNPPTLwa-kfLRYWHEVEDAKC-----LDM--------KVLEVEKEVFVGFRT 136 Prevotella nigrescens ATCC ...
ZP_18267983   95 gapYQKVGHEWREQKGKNNVvq--mYEIWK-LEESACwv-vkDDFqedttatvKEYRPYVWAFAGFKN 158 Saprospira grandis DSM 2844
WP_014546244  79 ---VTEISVLPNRMEGIPELk---lKQFWKKTPDKLC-----NGF--------ETLTPAEIVFAGFKK 127 Fibrobacter succinogenes
WP_014223676  77 ---FTEQSLLAHRMKDVKSLn---fRQYWREQEDELC-----DGK--------KVLQPAELVFVGLKK 125 Tannerella forsythia
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