Conserved Protein Domain Family
O_hepto_targRPT
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TIGR04415: O_hepto_targRPT 
autotransporter passenger strand-loop-strand repeat
This model describes two tandem copies of a strand-loop-strand repeat that occurs often in type V secretion system (T5SS). These repeats usually occur in the passenger domain of the classical monomeric autotransporter. Proteins with this repeat often are encoded next to a member of family TIGR04414, the Aah/TibC family O-heptosyltransferase, and may be glycosylated in regions with this repeat.
Links
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Statistics
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PSSM-Id: 275208
Aligned: 76 rows
Threshold Bit Score: 29.3508
Created: 10-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
AFB71150       56 VSTGGTVSSGETQVVYSGGETSNATVNSG-GTQIVNNGG 93   Escherichia coli
ZP_11377189   146 FINSGTISAGGTEIIASGGTGQNATV--H-GVQYVSAGG 181  Gluconobacter frateurii NBRC 101659
ZP_11377189   273 SLLNVTISAGGTAIVENGGYASGGTINKG-GVEIVSSGA 310  Gluconobacter frateurii NBRC 101659
AHJ68518       29 VTGPVVLGHINTLTISSGAVVSSAILDGGvPTVSVLSGG 67   Granulibacter bethesdensis CGDNIH2
WP_012029732 2876 TLNNATVNSGGSLVVD--GTVNGATVAAG-GSVTVGAWG 2911 Bradyrhizobium sp. ORS 278
WP_012029732 2800 VVSGTSVSSGGTLELLGGAAANGTTYASG-SFLEIVSGT 2837 Bradyrhizobium sp. ORS 278
WP_012029732 2616 TADNASIASGGHLVVN--GTVVGATISNG-GAV-VSSGG 2650 Bradyrhizobium sp. ORS 278
WP_012029732 2435 AASGTVVQSGGTLELA-GGSWTNTTISAG-GTLYATSGA 2471 Bradyrhizobium sp. ORS 278
WP_012029732 2201 TASGTTLLAGGLLEIGSGYTQSGFSVGSG-AFLQVDSGG 2238 Bradyrhizobium sp. ORS 278
AHJ63541       67 gIMTESVEVNGYLIVANGGVVSGNTY-NS-NVVTIAAGG 103  Granulibacter bethesdensis CGDNIH3
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