4WBS


Conserved Protein Domain Family
LPS_export_lptB
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TIGR04406: LPS_export_lptB 
LPS export ABC transporter ATP-binding protein
Members of this fmaily are LptB, the ATP-binding cassette protein of an ABC transporter involved in lipopolysaccharide export. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other]
Links
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Statistics
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PSSM-Id: 275199
Aligned: 15 rows
Threshold Bit Score: 405.504
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
4WBS_A        39 SLVVRNLKKRY-GSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDGKSISLLPIHKRASLGLS 117 Burkholderia ph...
WP_005647567   3 ILTAENLAKSY-KSRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQDQGKIVIDGEDISLLPMHNRAQRGIG 81  Haemophilus inf...
EEW91803      38 TLVARGLCKSY-RGRQVVNGVSFGVRAGEAVGILGPNGAGKTTCFYMVTGLVPADSGSIEIDGFDVTSMPMYRRSRLGIG 116 Brucella suis b...
WP_002243983   7 RLVVQNLQKSF-KKRQVVKSFSLEIESGEVIGLLGPNGAGKTTSFYMIVGLIAADAGSVTLDGQELRHLPIHERARLGVG 85  Neisseria menin...
WP_000047473   4 TFRMDNLIKVY-NKRKVVDGASFNIKKGEVVGLLGPNGAGKTTSFYMSVGFVRPDSGKVFIDGQDVTDSPMHIRARLGVG 82  Leptospira inte...
WP_011551181   4 RLIAEGLEKSFrGRKKVVAGVSFSVAAGEVVGLLGPNGAGKTTSFNMVVGLVSPDAGRVRIGDEDLTHLPMHRRARRGVG 83  Myxococcus xanthus
WP_010938918   4 VLQGEDLRKRF-GQREVVRGVSVSVQQGEIVGLLGPNGAGKTTTFYMLTGIIKPTAGIVRLDGQDIADWPLHERARVGLS 82  Desulfovibrio v...
WP_010960072   3 TLIAENLGKRY-YRRTVVDGVNLSIDTGEIVGLLGPNGAGKTTSFYMIVGLIRPDQGTISIDGRPITHMPMHARARLGLG 81  Methylococcus c...
WP_010889754  25 VLKADNIIKKY-GEKLAVNGITINIYKGEVVGLLGPNGAGKTTTFYTIVGFIKPNAGKVLINDYNISSLNMYERARIGIV 103 Lyme disease sp...
WP_010886311  17 SLQIKNISKSY-KKRNILTDISLHIKQGEIVGLFGPNGAGKTTCFNIIIGLMRPDSGQLLLNDINITNLPIYLRARLGIG 95  Rickettsia prow...

4WBS_A       118 YLPQEASVFRKLSVEENIRAVLELQvgddgKRLSKDAIASRTEALLDELQISHLRENPALSLSGGERRRVEIARALATNP 197 Burkholderia ph...
WP_005647567  82 YLPQEASIFRRLTVYENLMAVLEIR-----KDLTPQQRREKADELIEEFNISHIRDNLGQALSGGERRRVEIARALAANP 156 Haemophilus inf...
EEW91803     117 YLPQEASIFRGLSVENNIKAVLEVV-----EK-DRARRASELDALLEEFHIAHLRKAPAISLSGGERRRLEIARALASRP 190 Brucella suis b...
WP_002243983  86 YLPQEASIFRKMTVEQNIRAILEIR-----TK-DKNQIDREIEKLLADLNIGHLRRSPAPSLSGGERRRVEIARVLAMKP 159 Neisseria menin...
WP_000047473  83 YLAQEASIFRKLTVAENLEAILETM------NLSRTEIIKRRDDLLIELQIMRVANQKGYTLSGGERRRCEIARALVTNP 156 Leptospira inte...
WP_011551181  84 YLPQEASVFRKLTVRDNFLAVLELQ-----KDLDAKAREQRADTLLDEFGLTHVGESLGGDLSGGERRRAEIARSLIPQP 158 Myxococcus xanthus
WP_010938918  83 YLPQESSVFKRLTVRENLEIILEHT-----G-LPAARQKERAEALMADFGIAHLASSRAMHLSGGERRRLEIARCMIREP 156 Desulfovibrio v...
WP_010960072  82 YLPQEPSIFRKLTVADNLRAVLEFR-----PDLTRGQQELIIEELLEEFSISHLRDQRAAGLSGGERRRVEIARALACEP 156 Methylococcus c...
WP_010889754 104 YLPQDASIFRELTVEENIMVALERR-----EDLSKAERKIELVNLLKEFEIKRIQSQKAYTLSGGERRRAEIARALAVNP 178 Lyme disease sp...
WP_010886311  96 YLLQEPSIFRGLSVADNIKAVVEIS-----EN-DKEVIEQKTHNLLEKFSIVHLKDLSSASLSGGERRRLEIARSFVIEP 169 Rickettsia prow...

4WBS_A       198 SFILLDEPFAGVDPIAVLEIQKIVKFLKQRNIGVLITDHNVRETLGICDHAYIISDGSVLAAGAPGDIIENESVRRVYLG 277 Burkholderia ph...
WP_005647567 157 KFILLDEPFAGVDPISVSDIKKIITDLRNRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQVMNDEQVKRVYLG 236 Haemophilus inf...
EEW91803     191 NFMLLDEPFAGVDPIAVSDIQQLVRHLTSRGIGVLITDHNVRETLGLIDRAYIIHAGQVLTHGRPAEIVANPDVRRLYLG 270 Brucella suis b...
WP_002243983 160 HFILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTVLASGKPDDLVGNEQVRSVYLG 239 Neisseria menin...
WP_000047473 157 DFILLDEPFAGVDPIAVKDIQTVIGSLKERGLGILITDHNVRETLKITDRAYIMYSGRILISGSTHDLVNDPETRRIYLG 236 Leptospira inte...
WP_011551181 159 RFILFDEPFAGVDPINVGDLQRQIFLLRERGLGVLITDHNVQDTLGICDRAYIIAQGRILEEGTPAEIAASPKARAVYLG 238 Myxococcus xanthus
WP_010938918 157 KFVLLDEPFAGIDPLAVGDIQGLIRKLRDRGIGVLISDHNVRETLTICDRAYLVHQGQVILDGTPEHIVGDEQARLVYLG 236 Desulfovibrio v...
WP_010960072 157 RFMLLDEPFAGVDPISIIDIRNIIEHLKNRGIGILITEHNVRETLGICDRAYILAAGKVIAEGNATEIVNNREVRQVYLG 236 Methylococcus c...
WP_010889754 179 YFLLLDEPFAGIDPIAIGDIKNIIKILKEKNIGVLITDHNVRDAFDIIDRAYIVYQGQVLDEGDVDYIISSEKAKKLYLG 258 Lyme disease sp...
WP_010886311 170 KFIMLDEPLAGIDPLAISDIKKLITYLREFNIGILITDHNVRDTLDIVDRAYVIFEGKVLLEGSAQEIANSKKVKEVYLG 249 Rickettsia prow...

4WBS_A       278 EHFRM 282 Burkholderia phymatum STM815
WP_005647567 237 EQFKL 241 Haemophilus influenzae
EEW91803     271 DQFTL 275 Brucella suis bv. 4 str. 40
WP_002243983 240 KNFKY 244 Neisseria meningitidis
WP_000047473 237 EDFTL 241 Leptospira interrogans
WP_011551181 239 ERFRL 243 Myxococcus xanthus
WP_010938918 237 ADFCL 241 Desulfovibrio vulgaris
WP_010960072 237 DNFSL 241 Methylococcus capsulatus
WP_010889754 259 EEFRL 263 Lyme disease spirochete
WP_010886311 250 ESFNF 254 Rickettsia prowazekii
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