1G2H


Conserved Protein Domain Family
HTH_TypR
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TIGR04381: HTH_TypR 
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TyrR family helix-turn-helix domain
This model describes the C-terminal DNA-binding helix-turn-helix domain of several regulators of aromatic amino acid metabolism. Examples include TyrR in Escherichia coli and PhhR in Pseudomonas putida. Most members of this family have a sigma-54 interaction domain. [Regulatory functions, DNA interactions]
Links
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Statistics
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PSSM-Id: 275174
Aligned: 17 rows
Threshold Bit Score: 94.7327
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1G2H_A        13 TLDEIIGFYEAQVLKLFYAEYPSTRKLAQRLGVSHTAIANKLKQYGIGK 61  Haemophilus influenzae
ZP_02478199  484 SLEELVNRFEASLLRKFYAEYPSTRKLAQRLGVSHTAIANKLRSYGISK 532 Haemophilus parasuis 29755
ZP_04977029  264 TLEEMMSQYEAQLLHQFYAEYPSTRKLAQRLGLSHTAVANKLRQYGLTK 312 Mannheimia haemolytica PHL213
ZP_05850119  270 TLDEIIGSYEAQVLKLFYAEYPSTRKLAQRLGVSHTAIANKLKQYGIGK 318 Haemophilus influenzae NT127
ZP_10603137  452 SLEQAVGDFERELLQRLYASYPSTRQLAGRLQTSHTAIAQRLRKYGIPK 500 Pseudomonas sp. GM84
ZP_10778938  469 SLADIMGDVERRILASLYPQYPSSRQLAKRLGVSHTTIANKLRHYGIGA 517 Halomonas sp. KM-1
ZP_01043150  464 SLDEAVRRFESTVLKRLYPSFPSTRQLARRLGLSHTAVANKLRDYGIGK 512 Idiomarina baltica OS145
WP_012072703 276 SLEQIMADFESRLLRKFYAQYPSTRKMAARLGISHTAIANKLKQYGIGK 324 Actinobacillus succinogenes
ZP_01868210  464 SLDDIMKDYESRVLEKLYQSFPSSRKLAKRLNVSHTSIANKLRDYNIRK 512 Vibrio shilonii AK1
WP_005767731 468 GLDAIVGRFERSVLEQLYAHYPSSRQLGKRLGVSHTTIANKLRDYQISK 516 Pseudomonas syringae group
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