Conserved Protein Domain Family
choice_anch_C

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TIGR04362: choice_anch_C 
choice-of-anchor C domain
This family describes an extracellular bacterial domain that occurs on a number of proteins with PEP-CTERM (exosortase recognition site) sequences at the C-terminus, as well some with an apparent alternate anchor sequence. Note that related pfam04862 (DUF642), as of release 26, is double the length of this model because it has two tandem regions homologous to this domain. pfam04862, in turn, belongs to a Pfam clan called the galactose-binding domain-like superfamily.
Statistics
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PSSM-Id: 275156
Aligned: 16 rows
Threshold Bit Score: 130.948
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_10443761    24 NLITNGNFETLAP---GYtfgSG----FKVVSSGSSaITGWTVGA---SSVDLIR-NAYN----AING-YSIDMLGTPGP 87   Janthinobacte...
ZP_08273222    26 NLITNGDFETFFS---PFn-aDS----FSTVNAGSSaLTGWTVGG---ASIDVINnGKYG----AISG-NSIDLLGTPGP 89   Oxalobacterac...
ZP_09141507    22 SLLVNGSFELGSP---QPa-aGG----FSTLGTGNSaITGWTVSS---GSIDWIN-GYWQ----AKDGtHSIDLAG-GAP 84   Sphingomonas ...
ZP_07373371  2280 DIALNGGFESGPA---DG---VP----GVQVEAGSTaITNWTVLS---GNVDHIDtTAGAaevvALEGeNAIDLHG-DRT 2345 Ahrensia sp. ...
ZP_01001144    16 ATIVNGGFESGSD---GS---DV----FSVIGSGP--LPGWTVAS---GNVEIISnNYWE----SAEGgYSLDLDG-VLV 75   Oceanicola ba...
ZP_03626308  2787 NLIQNGSFELPSN---NG---NG----YVLYNSGATnIPGWRVMGpvnANIALVN-GYLGa---PADGaQYLDPSGNTGN 2852 Pedosphaera p...
WP_011287260   35 lPLINGDFENTSL---AG---NPa---YYTLAAGSTaITGWTVGG---QGIDYIK-NYWQ----DASGnFSLDLSG-TGS 96   Dechloromonas...
WP_015765446   28 SIVANGSFEDGLS---NI---GK----FTTITSG---LTNWTISS---GNVDYIG-SYWL----ASNGsRSLDLNGSSIP 86   Candidatus Ac...
WP_012268334   34 NLIINGSFEEGDY---DS---NVvdpnFARLSQGSSaLTGWTIGG---AGVDWHNsNDMKf---PIEGdLIIDLNLDGGS 101  Microcystis a...
WP_015765447   28 NLITNGDFESWSGsflPS---AG----YSTVNAGQSfINDWTVGS---TSVDVIR-GAYG----AISGi-SIDLLGTPGP 91   Candidatus Ac...
ZP_10443761    88 -G-FLSQNFNVVAGQTYSLSFDMAR------NSsg----pAGQGVAVKFGG-Va--gDFYSTAAa-------sNTLYSHT 145  Janthinobacte...
ZP_08273222    90 -G-SLSQAFNTVIGNFYSLNFDLSQ------NSn------NAPSTTVSVAG-N----STVYSGT---------LPFSHFS 141  Oxalobacterac...
ZP_09141507    85 -G-GIEQTFNTVAGTVYSVNYWLSG------NPdg---gdIGKDGVVAAIN-Gsv-vDASSTITgiqgsthanMNYSLKN 151  Sphingomonas ...
ZP_07373371  2346 -G-AIVTQLSTQTGATYVVEFGLSA------AFgd---geTIRDVEVGVNG-Lg--eQFSVDTSgltg--agvVPWVTES 2409 Ahrensia sp. ...
ZP_01001144    76 -GsIFQDVTGLNVGSVYRLGFAMSS------NPne---gvVVHTLGVNAGP-Ay--qTFTHTATgsl----qnMEWTYHS 138  Oceanicola ba...
ZP_03626308  2853 -G-GIAQTFSTVPGKTYLLIFYH--------GTys---thGLNALGVSVGT-N----AYTFGETst-----snLGWTREE 2909 Pedosphaera p...
WP_011287260   97 -G-SISQAFDTLAGHTYQVTFAMAG------NPddmtgpeLVKQLRAVAAN-FndvfQFHHDTSsns---rtnMGWIEQS 164  Dechloromonas...
WP_015765446   87 -TpTVSQAVSLTGGQQYLLSFDMAG------NPdg---gpLTKSLTVAVGT-AlpsqSVTFDSTgkt---ttaMGWITKS 152  Candidatus Ac...
WP_012268334  102 sG-TLSQTFSTIIGQFYTLSFSLAGpdlsatNPsf----pNPRQVSVQVAA-Vn--qIFSTSASdh-----ldLQWQLHE 168  Microcystis a...
WP_015765447   92 -G-SVSQTFASSASQQYKVAFDLSK------NTys---tgGASAMTVIIGGaAp--lSLSYTGT---------ASPTHYE 149  Candidatus Ac...
ZP_10443761   146 LNFTAATTGLaTLSFASAAKAGtrfdnySGAVIDNVSV 183  Janthinobacterium lividum PAMC 25724
ZP_08273222   142 QQFKATEAST-TLSFSSLGGGN------SGAVLDNVSV 172  Oxalobacteraceae bacterium IMCC9480
ZP_09141507   152 FTFTASGNST-TLRFTSDPSESa-----YGAVIDMVTV 183  Sphingomonas sp. KC8
ZP_07373371  2410 LVFTASTTTT-SLSFTSLDANIr-----NGVLLDNVVV 2441 Ahrensia sp. R2A130
ZP_01001144   139 LDFTAMSSVE-RVMFTSISGGTs----aAGPALDDVTL 171  Oceanicola batsensis HTCC2597
ZP_03626308  2910 VSFVASSNLT-TLTFMDLSGYDa-----NDAFVDNVQV 2941 Pedosphaera parvula Ellin514
WP_011287260  165 FSFTALANQT-TLSFESMESSa------YGPALDNVRV 195  Dechloromonas aromatica
WP_015765446  153 FLFTAPSTGSyALSFKSDVTDPc----cYGPALDNVSI 186  Candidatus Accumulibacter phosphatis
WP_012268334  169 LSFQATGNQT-TLTFSSLDNSGf-----WGPALDNVTV 200  Microcystis aeruginosa
WP_015765447  150 FLYTATGTST-NLKFVSADSGN------SGAVLDNVSV 180  Candidatus Accumulibacter phosphatis
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