Conserved Protein Domain Family
other_trbK

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TIGR04360: other_trbK 
conjugative transfer region protein TrbK
Members of this family regularly are encoded between the TrbJ and TrbL proteins essential for P-type conjugal transfer, and therefore are designated TrbK. Positional analogy to family TIGR04359 (the entry exclusion lipoprotein TrbK of IncP plasmid RP4), which is a lipoprotein and not homologous, suggests this protein may also be involved in entry exclusion. Members of this family are small, with a non-lipoprotein signal peptide and a conserved disulfide bond. [Mobile and extrachromosomal element functions, Plasmid functions]
Statistics
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PSSM-Id: 275154
Aligned: 27 rows
Threshold Bit Score: 52.3365
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_08664732    7 ARLGAVVFVAIAITATAIEMTRKEEAPAE---EpAGLAEPVRd--PLREAQRRCQQLGQSAA-S-DADCMRVWAETRDRF 79  Paracoccus sp. TRP
ZP_10085261   10 PMAVAVSLTVLVVGACAIRLRGDDSATQS---S-ASLAAKPD---PAAAKLEQCRTVTYEQR-EaLLECQRIWAERRSQF 81  Bradyrhizobium ...
ZP_10081933    8 KALSLLTTIGVFAVAACTIQLRGAEESPA---P--KAEQTTS---ATSSDLARCRSVTSEDT-AgYQRCKRVWDENRRRF 78  Bradyrhizobium ...
WP_013502968  11 FPLVAASVMVLIVTACAIELRPDDGSSPM---V-TPQPQP-Sd--PLARRLAKCRTVTVDQSdE-LAECRRLWAETRRRF 82  Rhodopseudomona...
WP_011473962  11 sIVVSVATLVLVVAACTIELRNQEQISSS---A-APAAE-QAd--PLAAELARCRTVTLEQT-EaLAKCRQIWAERRRQF 82  Rhodopseudomona...
WP_011542753  10 GAVIGGMALTIALMAALDPPAPRASALPQ---I-SGADARPN----LKDTLRRCRTVTVADA-E----CEAAWEAKRRHF 76  Sphingopyxis al...
WP_011951017  24 aiallilaaGMAATVALRAPAGNDSRFTVgdgR-EGMVERPAd--PLATELARCRTAAP-DT-V-DERCRAAWEVNRRRF 97  Sphingomonas wi...
WP_014132714   9 LRLIAFGLGGLAALFAAAELANTAAPEAV---M-----EPSAgddPLQEELARCRTITPEDL-DtDTACRAAWAEHRRRF 79  Pelagibacterium...
WP_011665405  10 ARLAAVVFAFVAATAAVIHGGRDEDGGAI---A--PLAREQAd--TLASELARCRTISSSET-SaLEVCRRIWAENRRQF 81  Rhodopseudomona...
WP_012047198  12 GRAVGFLLVAIAIVAAALHFHTSPPRLEP---R--AMEEHTPd--SLAEELKRCQLIADQAK-D-DPACEAAWAENRRRF 82  Bradyrhizobium ...
ZP_08664732   80 LG 81  Paracoccus sp. TRP
ZP_10085261   82 LG 83  Bradyrhizobium sp. WSM1253
ZP_10081933   79 FG 80  Bradyrhizobium sp. WSM1253
WP_013502968  83 LR 84  Rhodopseudomonas palustris
WP_011473962  83 Lk 84  Rhodopseudomonas palustris
WP_011542753  77 FG 78  Sphingopyxis alaskensis
WP_011951017  98 FG 99  Sphingomonas wittichii
WP_014132714  80 LG 81  Pelagibacterium halotolerans
WP_011665405  82 FA 83  Rhodopseudomonas palustris
WP_012047198  83 FT 84  Bradyrhizobium sp. BTAi1
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