Conserved Protein Domain Family
C_S_lyase_PatB

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TIGR04350: C_S_lyase_PatB 
putative C-S lyase
Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A).
Statistics
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PSSM-Id: 275146
Aligned: 12 rows
Threshold Bit Score: 577.347
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_08537471    5 FDQKIDRSFSQSLKFDARTAYFGrSDVIPMWVADMDFAAPEAVTKALVERAKHPIYGYTLHPDSMYEALIEWsAKRYDWQ 84  Methylophaga am...
ZP_05292057    9 FDRIWDRHGTGSLKWDGAKARFG-AEVLPMWVADMDLPTAPVVLEALRRRLQHPILGYPWLDHEYRMAACQWmAQRHGWG 87  Acidithiobacill...
ZP_01312014    7 FDQIVDRHGSDSLKWG----IYP-PEILPMWVADMDFTSPPEVLTALHQRIDHGVFGYALATQKVTDSVVNWlQQRYDWT 81  Desulfuromonas ...
WP_013460761  10 eFRFIDRSNSNAEKYTLRKKLFHtEEVMPMWVADMDIATPECVLEALKERLNHPIFGYEIMPDSAYAAQIAWmREHHSFE 89  Sulfuricurvum k...
WP_011633926   5 FDREIGRDGTFSTKYDGREITFNrPDVIPLWVADMDFAAPPAVTEALVKRATHPVYGYTQFPDSLYESLIYWlKSRHGWQ 84  Nitrosomonas eu...
WP_013327439   9 FTTASEREGTNAEKYTLREELFGtQDVLPVWVADMDIDTPQCVLDAVKKRLQHPVMGYEEVPKSAFMAQIEWmKKEHDID 88  Sulfurimonas au...
WP_011370963   5 FNNAISRLGTDSEKYDLRQKLFGtDDVLPMWVADQDLPTPPFILEVLKKRLEHPILGYNHMPDSLYQSIVNWqAQYH-YE 83  Thiomicrospira ...
WP_012823949   9 FSHGVDRANSDCVKYDARADRFGrEDVIPLWVADMDFAAPAAILNALKARAEHPVYGYTIYPPDFYSAIQGWlATRHGWN 88  Halothiobacillu...
WP_013260885  10 FDTVIDRNHTDCEKFDQREQRFGrADVMPLWVADMDFAAPACVRKALAQRLEHPVFGYTFPADTLYEQLCGWfARRHQWA 89  gamma proteobac...
WP_012471008   4 FDTVIDRRNTGSEKWD----RYAgQDIIPLWVADMDFRSPPAVLEALQQRVEHGVFGYSRPPEELVAVVLAMlRQEYGWQ 79  Geobacter lovleyi
WP_013834583  23 FTQSIDRTGTGAEKYELCESLFGrADVLPMWVADQDLPTPPFVIAALERRLRHPILGYTHTSDALCASVVNW-QGQYGYQ 101 Thioalkalimicro...
WP_012536039  10 FDRVIPRRGTGCLKWDGAAERFG-AEVLPMWVADMDFAAPDAVIAALQERLNHPVFGYPGNEGTMLQAAADWlARRHDWR 88  Acidithiobacill...
ZP_08537471   85 IKQSDIIMCPGVVPSINAVIEAITEPGDKVIVQPPVYFPFFSSVEKTGRELVLNPLKLD-N-N--RYFIDFEHLEDC-A- 158 Methylophaga am...
ZP_05292057   88 PEVGHTQVASGVVPALFAAVRALTAPGDTVLTLTPVYPPFLQAVRSNGRALRTLTLECD-AeG--VYRIPWEQLDDA-L- 162 Acidithiobacill...
ZP_01312014   82 IDPQWLVWLPGLVPALHAACLSYTEADQEVVTFSPVYPPFLSAPKTCQRPHRDIPLTRD-H-G--RYTFDLQRFDDQ-L- 155 Desulfuromonas ...
WP_013460761  90 IKREWLSYSPSVVASIGCAIRALSEEGDEVIVMDPVYPPFYSMVKENNRHLILHPLKPDvE-G--KYHFDLEQLRTQ-I- 164 Sulfuricurvum k...
WP_011633926  85 IAREWIVFCPGVVPSLSASVLALSKPGEAVIVQPPVYYPFFSVVKRTGRKLLNNALQQA-Q-G--SYGMDFADLARQ-A- 158 Nitrosomonas eu...
WP_013327439  89 FNLEDMLYSHSVVASMHTCIEAFTKEGEGVIVQTPVYPPFFHSILKLNRKLVKNSLKLDsE-G--KYSFDIEDFKAK-I- 163 Sulfurimonas au...
WP_011370963  84 VEPSDIVFTHNVANGFFMAVSAFTAPGEAVLVQPPVYPPFLTASTIENRQCVEAPLILK-N-H--RYEIDFEAFEQK-Ii 158 Thiomicrospira ...
WP_012823949  89 IDTKSILPLPGVVPTLSLLVHLFSQPGDGVLVQTPVYPPIHQMPVSHHRRLLENTLRWT-P-E--GYEIDWDDFTTK-A- 162 Halothiobacillu...
WP_013260885  90 LDPAQVMLAPGVVPSLFACVQALTQPGEGVLVPTPVYPPFLGAVQQTGRELIQSPLRET-E-R--GYTLDFEHLERE-A- 163 gamma proteobac...
WP_012471008  80 VQSKWLVWLPGLVCGLNVSCRAVGAPGDAVATFTPVYPPFLTAPGLAGRELISVPLVEQ-Q-G--RWEMDLEVLEQA-I- 153 Geobacter lovleyi
WP_013834583 102 CQPEDLVFTHNVANGLFLAVQALSREGEGVVIMPPIYPPFAQAISRNNRHVVAVPLLYQ-P-GatDYRFDLAGLAQAfK- 178 Thioalkalimicro...
WP_012536039  89 PENDAIACISGVVPALYAAVRAFTRPGEAIIVMPPIYPPFMTAVEDNGRELLLAPLIAD-DtG--HYRMNWDALEIA-V- 163 Acidithiobacill...
ZP_08537471  159 QqGAKTLLFCSPHNPVGRVWTREELQQLLELAERYQMTIISDEIHADLIf-pEQQHISLATLThs--nNVITTLAPSKTF 235 Methylophaga am...
ZP_05292057  163 A-GTRLLLLCSPHNPVGRVWTSEELSRLVALCRGHGVRVVSDEIHADLS---ELPHTPLSALMp----EAVLLSAPGKAF 234 Acidithiobacill...
ZP_01312014  156 TdKSRLLLLCHPHNPVGRAFEKQELTALAEQCIKHNLIICSDEIHCDLVl-nHTRHIPFACLSeeiaqRTVTLMSAAKTF 234 Desulfuromonas ...
WP_013460761 165 TsKTKLLLFCSPHNPIGRVWSREELTLLGRFCLEHGIRIISDEIHCDIVy-kPHTHIPMASLSlelseNTVTLIGPGKTF 243 Sulfuricurvum k...
WP_011633926 159 As-ARMLLFCSPHNPVGRVWSRSELEKLLDISRQYNLIVVSDEIHADLIy-pGNKHHILADLAds-seAIITAVAPSKTF 235 Nitrosomonas eu...
WP_013327439 164 NeNTKLLLLCSPHNPVGRVWRKEELEEILAICLEHNIVVFADEIHSDLVy-kPNKHIAFASLSqkakeITVTALGVGKTF 242 Sulfurimonas au...
WP_011370963 159 DhQVRLFLLCNPQNPSGRVWLKSELEKLAAICLKHEVVVVSDEIHADMTy-pEHQHIPMASLSeevknNTVTLNSPGKTF 237 Thiomicrospira ...
WP_012823949 163 Q-QARLFILCSPHNPVGRVWRRDELARMAEICIDAGVLILVDEIHADLVy-ePNRHIPIASLSpeiaaNCITLNAPSKTF 240 Halothiobacillu...
WP_013260885 164 A-NARMLLLCSPHNPVGRVWRADELKALIDLALRHRLVVVSDDIHCDLTy-lGEKHLPLATLApp-elRLITALSPSKTF 240 gamma proteobac...
WP_012471008 154 TpRTRLLLLCSPHNPVGRVWSREEQLALADLVERHDLMVCSDEIHAGLVldsGKTHIPFACLKpelarRTITLLAPSKTW 233 Geobacter lovleyi
WP_013834583 179 ReDVRLCLLCHPHNPSGRVWTRTELTQLAELALAHNVILVSDEIHGDLTl-pPNSHCPLASLSpavaqHTVTLSSPGKTF 257 Thioalkalimicro...
WP_012536039 164 Q-RAKLLLLCSPHNPVGRVWTAEELQRLGTLCADAGCVVVSDEIHADLS---QHPHCPFPSRFp----RSILLTSAGKSF 235 Acidithiobacill...
ZP_08537471  236 NIAGLGLSALIVSNMQQRKAIKAVFEQWHISPANPFSITAFEAAYR-Y-GEDWLKQLNVYIYKNKKWVEDFLQKRCPQIQ 313 Methylophaga am...
ZP_05292057  235 NMAGLGGAVIACGDAEAYRLLREELERSQCQHATTPGLVAGIAAWR-D-GAQWLDRVRAYLRGNALALAQRIARDMPALA 312 Acidithiobacill...
ZP_01312014  235 NIAGLNCGFAIIPNPTLRRQFNHAAQGM-IPHPNALGYTATQAAFT-Q-AEPWRQALLEYLRGNRDYLLKEINQRLPMLT 311 Desulfuromonas ...
WP_013460761 244 NMAGFSISTVCIASDTLQRAYEEERQRVHFGDGAALSHVAFEAAYT-Y-GGPWHRNVMDHLSRNVRLIEEWCRKN-PVIR 320 Sulfuricurvum k...
WP_011633926 236 NIPGLNLSALIIPDPQHRAAIRDQLEIMHISAANPFSIVAFEAAYR-A-GGEWLDALMAYLESSREMVQHYLAEYLPQIR 313 Nitrosomonas eu...
WP_013327439 243 NMAGFAMSSVAIQNKELKEQFKKAYDRVHFAQGSSLSHVAFETAYK-E-GKEWLEALKSHLYNNYLLLEAVAKKYPQFIK 320 Sulfurimonas au...
WP_011370963 238 NLGGLQIGYAIIANPELKAAYLKICQANAIQDLNLFGYLATQAAYS-EqGCLYRDQLLQHFLDNIERVEDFFQTFLPQVN 316 Thiomicrospira ...
WP_012823949 241 NIAGLNTAFAVIENHELRWQVQESVINAGLGSGNVFGITALIAAYQ-F-GSDWLTGLMRQLKENRDRVCRFFAAEDLGID 318 Halothiobacillu...
WP_013260885 241 NIPALNLSALVVAHRGDSNAIQKYFQRQRVNPYNPFALVAFEAAYR-E-GDAWLEALRAYLGANRQLVAEFQQVH-PILR 317 gamma proteobac...
WP_012471008 234 NIPGLGCSFAVIPDKQLRRSFRDVMAGI-VPHVNLLGYTATLAAYR-D-GEPWRQALLEYLRQNRDLVLEAIQA-MPGLK 309 Geobacter lovleyi
WP_013834583 258 NLAGLQIGYVIAANPAHRSALQAAAARVKIDELNLFAMVATQAAYSkD-GLIWRDALCQHIQNNIAHITHVFAEMAPAVR 336 Thioalkalimicro...
WP_012536039 236 NLAGLGGGVSVIPDAGLRRTFLTEVRRSQIQHTNLFALTAMTCAWH-R-GAEWQSALRGYLADNARFISEYLVRELPEVG 313 Acidithiobacill...
ZP_08537471  314 LIESEGTYLLWLDCRALG----M-----DNESLRRFFIeEARVGMNPGYVFGDNGSGFMRLNIGTRLEVVQQALENMADA 384 Methylophaga am...
ZP_05292057  313 FRPPEFGYLAWLDLRRCG----Q-----DDQRIDAVLR-EVGLGLNAGADFGPGGAGFRRLNFGCPRPLLEAGLDRLQRA 382 Acidithiobacill...
ZP_01312014  312 MEPVEATYLAWINVSAL-------------EDYRPAFFeQAGLGFSAGEPFGD--NRFMRLNFGCPRSTLEEAMLRLEQA 376 Desulfuromonas ...
WP_013460761 321 FRPPEATYLAWLDCRELG----L-----GDRELREFFVhKAGLGLSPGLSFGKEGSGFMRLNFAVPTVVLEDALEKLSGA 391 Sulfuricurvum k...
WP_011633926 314 LIPSQGTYLLWLDCRELG----M-----TDDELKHFFIfEAGIGLNAGISYGREGSGFMRMNIGAPRHRIRQALNSIRSA 384 Nitrosomonas eu...
WP_013327439 321 ITPIEATYLAWIDCRSMG----L-----KDKKLRAFFInEAKLGLNPGISFGREGSGFMRLNFAVSSAKMTEIVQRLESA 391 Sulfurimonas au...
WP_011370963 317 VMVPEASYLIWLDFSALF----S-----SQADLKAWLIqYAKLGLNDGESFGKAGKGFMRMNLAVSEETLTQALTQLKRA 387 Thiomicrospira ...
WP_012823949 319 VTSPEATFLLWLDCRKLM----QelklnDDAALSTFFVeQAGLGLNPGISFGQAGSGFMRLNIGCPANTLTRSLHQLRTA 394 Halothiobacillu...
WP_013260885 318 CHLPQASCLIWLDCRALS----L-----SDPDLSAFFIeKARLGLNEGISFGMGGEGFMRLNIGTQKRVlelalaqlaas 388 gamma proteobac...
WP_012471008 310 TWPVEATYLAWIDAQGLG----V-----ADP---AGLFeQAGVGLSDGAPFGA--PGFVRLNFGCPRSLLQQALERMHTV 375 Geobacter lovleyi
WP_013834583 337 VVQPQASYLVWLDFNPLIpqvfA-----DHAALQAWLInDARLGLNDGLNYGEVGRGFMRINLAVPPATLEHACLQLRQA 411 Thioalkalimicro...
WP_012536039 314 YRQPEFGYLAWLDVHHYG----N-----DETLARRLL--QAGLGLNPGPSFGSGGEGFVRLNFATPRSMLEEGLGRLRQA 382 Acidithiobacill...
ZP_08537471  385 IA 386 Methylophaga aminisulfidivorans MP
ZP_05292057  383 LA 384 Acidithiobacillus caldus ATCC 51756
ZP_01312014  377 IS 378 Desulfuromonas acetoxidans DSM 684
WP_013460761 392 LR 393 Sulfuricurvum kujiense
WP_011633926 385 LE 386 Nitrosomonas eutropha
WP_013327439 392 LQ 393 Sulfurimonas autotrophica
WP_011370963 388 IA 389 Thiomicrospira crunogena
WP_012823949 395 Il 396 Halothiobacillus neapolitanus
WP_013260885 389 lk 390 gamma proteobacterium HdN1
WP_012471008 376 CV 377 Geobacter lovleyi
WP_013834583 412 FA 413 Thioalkalimicrobium cyclicum
WP_012536039 383 LH 384 Acidithiobacillus ferrooxidans
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