Conserved Protein Domain Family
pseudo_SAM_Halo

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TIGR04347: pseudo_SAM_Halo 
pseudo-rSAM protein/SPASM domain protein
Members of this family all have a C-terminal SPASM domain (see model TIGR04085), a region usually found as a C-terminal second 4Fe-4S domain of radical SAM domain (see pfam04055) proteins. A majority of rSAM/SPASM proteins modify ribosomally produced peptides. In a few members of this family, the key Cys residues of the radical SAM domain have been lost, making this a pseudo-rSAM family. Members of this family are restricted so far to Haloarchaea, always occur next a member of family TIGR04031, and are often accompanied by another rSAM/SPASM domain protein. The function of this two or three gene cassette is unknown.
Statistics
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PSSM-Id: 275143
Aligned: 5 rows
Threshold Bit Score: 637.255
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012942905   2 ISISKLLCDLDAEGDGLRYDAADGSSKPQITEEKQRRPVVVWNATRRCNLYCSHCYAGADLKAAPSEFSTREAKTFLEGV 81  Haloterrigena t...
WP_010902854   2 ISVSKLLCDLDAESDGLRYDAAAESSEEQITEDKQQRPVVVWNLTKQCNLYCSHCYAAADTETAPGELSTAEGKALLDDL 81  Halobacterium s...
WP_004043816   2 ISISKLLCGQGAEGDGLRYDDPD-ADIEQIREEKQKRPVVVWNTTRRCNLYCEHCYAGADLDPAQGELSTAEAKGLIDDL 80  Haloferax
WP_011322496   2 ISVSTLLCDHAADGNQLRYNVDTGTDNP-VSEEPQRRPVVVWNTTNRCNLKCVHCYAGAETEAKAGELTTTEGKRLLDDL 80  Natronomonas ph...
WP_015788499   2 IPVSDLLVGVGDDES--GGAGADGAASEQSLAPDRSQPVVVWHVTGANNLDPEYGYDTAGPGHGDGELTTGEATAVIDDL 79  Halorhabdus uta...
WP_012942905  82 ADFGAPVILFSGGEPLVRDDLTELVDYAADLGLRPVLSSNGTLLTREKAEALNEAGLQYAGISVDGLPDRNDEFRGKDGA 161 Haloterrigena t...
WP_010902854  82 ADFGIPVVLFSGGEPMVRDDLEELIAYADDNGIRPVLSTNGTLITAERAAAMKDAGLKYAGISVDGLPERNDEFRGEEGA 161 Halobacterium s...
WP_004043816  81 AAYDVPVLLFSGGEPLVREDLVELVDYATDAGIRAVLSTNGTLITEEKARALRDAGLSYAGVSVDGLEERNDRFRGKDGA 160 Haloferax
WP_011322496  81 ADYGAPVVLFSGGEPMVREDLTELVAYAADAGIRPVLSTNGTLLTEERARELKEAGLAYAGVSVDGLAERNDEFRGVDGA 160 Natronomonas ph...
WP_015788499  80 AGYGVAAIRFAGGEPLLRDDLETLIERASEAGLRTELSTNGTLLTDERAESLRDAGLDDVDVAIDGLPDHHDELVGREGA 159 Halorhabdus uta...
WP_012942905 162 FEAAVRGIENCLDVGLKTGLRYTITEANAPDLEGVVDLLVEKGLDRFCFYHLDYGGRGAEIVDVDLSPQEKREAIEQVAD 241 Haloterrigena t...
WP_010902854 162 FDAAVRGIENSLDAGLKTGLRYTITEANAPDLPEVVDLLHDVGLDRFCFYHLDYGGRGADISNLDLSPADTRTAVRTVCD 241 Halobacterium s...
WP_004043816 161 FDAAVRGIENCLSVGLKTGLRYTITEHNAADMEDVVDLLYDVGVDRFCFYHLDYGGRGGDIADADLDDEAQRRAVRRLFD 240 Haloferax
WP_011322496 161 FQAAVEGIESCLDVGLKTGLRYTVTGQNVDDLDGVVDLLTDVGLDRFCFYHLSYSGRGETLSDIDLDAAERREVVKRICD 240 Natronomonas ph...
WP_015788499 160 FDDALDGIQAAQDAELDPGVRFTLTETNATDMEELVDMLALQGVERFRFHHLEYSTQDDELMELDVDHDAQRRAVRRVCD 239 Halorhabdus uta...
WP_012942905 242 LTIEYHDRGEEIETLLVGNYADAAFLVEYAREEFGEAKARAVYDYLERNGGDPTGERIADVDYAGNVHPTQFWQGYSLGN 321 Haloterrigena t...
WP_010902854 242 LTREYHAQGKEIETLLVGNYADAGFLVEYAREELGDQQADHIYRYLEANGGDPTGERIADVDYQGNVHMTQFWQGYSLGN 321 Halobacterium s...
WP_004043816 241 MTREYHAEGEEIETLLVGNYADSAYVVEYAEEELGRDHAERIHRYLRVNGGDPTGERVADVDYRGDVHLTQFWQGYSLGN 320 Haloferax
WP_011322496 241 RTLRSHRNGDEIETLLVGNYADAAYIVEYARREFGDEAAERVYKRLEQNGGDPTGERVAAVDCLGNVHPTQFWRTYSLGN 320 Natronomonas ph...
WP_015788499 240 ITLDAHDRGHDVETLLDGNWADTGYIYQYAREELSEDRAAAIRERLASVGGDPAGDRLADIDYQGNVHLTPYWQSYSLGN 319 Halorhabdus uta...
WP_012942905 322 VRDRPFGEIWEDESNPLLSALREREDRLTGKCADCRYKSICRGASRLRALATTGdLFAPDPQCYLRDEEI 391 Haloterrigena turkmenica
WP_010902854 322 VRDRSFGDIWSDDTNPLLAGLRDRDDRLTGRCASCQYRSICRGGSRLRALSAGG-PFDPDPKCYLTEAER 390 Halobacterium salinarum
WP_004043816 321 VRDRPFGDIWDDESNPLLAKLREREEHLTGKCATCQYQDVCRGSSRLRSLAATGeLFGPDPQCYLTPDER 390 Haloferax
WP_011322496 321 VRDRPFSDIWEDESNPLLRAVRNRPENLTGKCADCQYKEICRGGSRLRALASGNgLFGPDPQCYLDEAER 390 Natronomonas pharaonis
WP_015788499 320 VRDRPFSAIWEDESNPLLAKLRDRKEHVPDRCPNCEYYAMCRGGSRHRALAAEGdVWARDPQCYLTDEEI 389 Halorhabdus utahensis
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