Conserved Protein Domain Family
cas1_PREFRAN
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TIGR04329: cas1_PREFRAN 
CRISPR-associated endonuclease Cas1, subtype PREFRAN
Members of this family are the Cas1 endonuclease of a novel CRISPR subtype, PREFRAN, found in Prevotella bryantii B14, Prevotella disiens FB035-09AN, Francisella tularensis subsp. novicida, Francisella philomiragia, Butyrivibrio proteoclasticus B316, Helcococcus kunzii ATCC 51366, etc.
Links
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Statistics
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PSSM-Id: 213942
Aligned: 4 rows
Threshold Bit Score: 473.092
Created: 10-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
ZP_06983368    6 DIEYRTIFVVNCLEKRNLRVSNGELLLEEVNdigSKTLTKLPFQKILALFVIGHISVTTPLIEKCKKFNIALVVMKPSLR 85  Bacteroidetes o...
ZP_09778111    3 DFEKKQIVFVFSNNKERISFKNDNLIVQDRD---ENIKLQTTCYRIFALFIVGDFSLTSGLIQRAHKFTFPIILMKQSLN 79  Succinivibriona...
ZP_09738235    6 DYMFKKIIIVFTNKGEKFRIQNDNLIVEDNN---GEIILQSTGYRIFSLWIVGNYNITTPLINRAKKFGYSIFLFSHSFR 82  Helcococcus kun...
WP_003040285   6 DIESKNIVFVNIFDGVKLSLSLGNIVIKDKEt--DEVKTKLSVHKVLALFIVGNMTMTSQLLETCKKNAIQLVFMKNSFR 83  Francisella nov...

ZP_06983368   86 PVFFWADAAGANYLLRRKQ-YEmsKNDISIAKILVANKIANQLTLLKNTRMSDELTTIAKFRCTRALDAIDAILDYD--R 162 Bacteroidetes o...
ZP_09778111   80 IYESFGSRMEGNVVLRKLQ-YN--YEGLSLAKHIVKNKISNQLAVLKSRRTKDDSLKEAINKLSKYIDDVDLVEDDKlsQ 156 Succinivibriona...
ZP_09738235   83 IIESFCIPLEGNTLLRQRQfYN--ENNFDIAKHFVKNKIENQKYALKKSDLDNLILNNVNLKLDEYYNKIDSIEDDK--S 158 Helcococcus kun...
WP_003040285  84 PYLCFGDIAEANFLARYKQ-YSvvEQDISLARIFITSKIRNQHNLVKSLRDKTPEQQEIVKKNKQLIAELENTTSLA--E 160 Francisella nov...

ZP_06983368  163 LMGLEGIVSKSFFAAYFQNNN-WTVRRPRIKSDALNATLDIGYTILFNYIESFVRMFGFDIYAGVYHRLWFKRKSLVCDL 241 Bacteroidetes o...
ZP_09778111  157 LLGIEGNSARIYFKHQFDNVL-WLGRQPRIKSDYINAILDIGYTILFNFIESMLNIYGFDTYCGVLHKQFYMRKSLSCDL 235 Succinivibriona...
ZP_09738235  159 LLGIEGAASRLYFSTLFIGKD-WKGRKPRVKHDINNCLMDLGYTLLFTYIEALLKCFGFDSYIGVYHKIFYKRKSLVCDM 237 Helcococcus kun...
WP_003040285 161 LMGIEGNVAKNFFKGFYGHLDsWQGRKPRIKQDPYNVVLDLGYSMLFNFVECFLRLFGFDLYKGFCHQTWYKRKSLVCDF 240 Francisella nov...

ZP_06983368  242 MEPFRCIIDNTVRSAFNRKQCTDKDFVVNKGEWRLRTEKNKDYCRLFFDVLIRYKGDVFKYIQAYYRCFMRGATVADYPK 321 Bacteroidetes o...
ZP_09778111  236 IEPFRIIVDIQVRKSVNLKQFVKEDFEINNLSYRLKWDCNKKYVSILLSAILEHKNEIFIYIQSYYRAFIKSKRTEEFPI 315 Succinivibriona...
ZP_09738235  238 IEPFRPIIDYQIVKMNNLNMIDNNDFTIRNFQVTLNYKDSKKYVGCLMKAILDNREDLFMYVQNYYRAFMKNKNIVDFPV 317 Helcococcus kun...
WP_003040285 241 VEPFRCIVDNQVRKSWNLGQFSVEDFGCKNEQFYIKKDKTKDYSKILFAEIISYKLEIFEYVREFYRAFMRGKEIAEYPI 320 Francisella nov...

ZP_06983368  322 FLI 324 Bacteroidetes oral taxon 274 str. F0058
ZP_09778111  316 YNW 318 Succinivibrionaceae bacterium WG-1
ZP_09738235  318 YKF 320 Helcococcus kunzii ATCC 51366
WP_003040285 321 FCY 323 Francisella novicida
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