Conserved Protein Domain Family
SpoChoClust_1

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TIGR04323: SpoChoClust_1 
sporadic carbohydrate cluster protein, LIC12192 family
Members of this uncharacterized protein family mark a rare but widely distributed carbohydrate biosynthesis cluster found sporadically in genera Bradyrhizobium, Leptospira, Magnetospirillum, Oscillatoria, Prochlorococcus, etc.
Statistics
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PSSM-Id: 213936
Aligned: 11 rows
Threshold Bit Score: 137.824
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_09202068    9 TLKGYVTVRPFGGVALPVPVQNLVLRNYCLQKGYTYSLPMGEHKYENCFMQLFATINAAQPGSHIGFCSAHMLPENEESL 88  SAR116 cluster ...
ZP_02189655   11 GLQGYVTHQSFKGMRMPATVQNLVMRDYITRKGAQIRLSVGEYFFDNCFVQLYSMLRKLDEIEGIVMCSLFMMPTDSDKR 90  alpha proteobac...
ZP_00056587    7 GYRGYISSRPIGGDRVPQAVQNLTVRDYARRRGLDFLLSATEYAMPDCTMMLEQVLDEMAGLGGAILYSLAQLPDDRARR 86  Magnetospirillu...
ZP_07109973    6 GWRGYIFSREIGGDFIPQRVQNIVIRNYAQTKGMLFLLSATEYYMDNCYMMLNALLEDLDSIAGIIFYSIKLLPPDAIHR 85  Oscillatoria sp...
ZP_06055387   10 ALAGYCHNKPFGPYSLPVKFQNIINANYAYKKNLIYGPGQGEPIFSKNHLQLRSMINDKTISRGLVMLSFYMLPKTRSKR 89  alpha proteobac...
WP_011382516   2 AYRGYIASRPVMGERTPQHVQNLVVRDYARRRGLTFALSATEYAMPGCYMILEQVLDEMPRLDGIICFSLFMLPHDVSRR 81  Magnetospirillu...
WP_011088179   6 GHRGYIGARPLNGSRTPQHVQNIVIRDYARRKNLHYLLSAAEHTMPGSYMVLEDILDELPRLRGLILYSIFMLPPDEARR 85  Bradyrhizobium
WP_000715958   4 GVRGYIFSRPFLGERVPQHVQNIVIRDYCQRNGLHYLLSATEYAMENCHLILEQVLDELVNLEGIILYSLFQLPIDLENR 83  Leptospira inte...
WP_011125435   2 NVFGYVTSRQFSNFVLPVPAQNACLREYARSIDATYTLPPLEHYFDNCYMQLFTVINSLSEADILAIYSVSMLPEDNTKL 81  Prochlorococcus...
WP_011818868   4 KSCVYVIPFKVNNWQLPIRVQVSYARDYSKRKNLIFSLPKSELLFSKKYNTLNLLLKN-GFSEFIIFSEILIANKECLKI 82  Prochlorococcus...
WP_014245675   6 KIYSYIFSRAFELELDSHREQNRLIREYCSRHNLEFPLANTEFVTEDSFFVLNSLLDEVKNASKILISSKTLFEKNSEMI 85  Bacteriovorax m...
ZP_09202068   89 MDQLTlKVINKSLT----LHCVFEGKELKNQADFSNLNRNLLLLKYA 131 SAR116 cluster alpha proteobacterium HIMB100
ZP_02189655   91 RWIYD-RFLESGAA----LHFVFEDIVVEDEEGVLRAEELLQMNAAL 132 alpha proteobacterium BAL199
ZP_00056587   87 RDILE-RALASGGV----LHAALEDLKLASGDDLRRWEDITLVRQAL 128 Magnetospirillum magnetotacticum MS-1
ZP_07109973   86 KKIYT-ELLSKGCG----LQFALEELAIFQENDIELIEDIIACKLLA 127 Oscillatoria sp. PCC 6506
ZP_06055387   90 NEIFK-LAIKKHKE----IHFVIEDIIFKEKKDIKKIEELFSYQKFT 131 alpha proteobacterium HIMB114
WP_011382516  82 AETWR-RVRAAGGS----LHFAVEGLAVQCDQEFDRVEDIWTARTVM 123 Magnetospirillum magneticum
WP_011088179  86 REIYD-RVLREGCD----LHAAVEEITLSSQKDIQAVEDILLVNKFA 127 Bradyrhizobium
WP_000715958  84 KRFYD-RLLSSSKI----CYFAVEGLKLSNQEEMERIENLWKIKLIL 125 Leptospira interrogans
WP_011125435  82 ENIVD-LVFNKKAS----FYFILEAKKVSFWSELSPVLFSYRLRNIL 123 Prochlorococcus marinus
WP_011818868  83 LKIWR-EFFKKDNSacplFHFTYSDESMDINKLILTIEKVIRNKKYA 128 Prochlorococcus marinus
WP_014245675  86 LSLLK-ENLNKDIQ----FTFCREDYSLTIEELVEYLE--LSKEKIL 125 Bacteriovorax marinus
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