Conserved Protein Domain Family
repeat_SSSPR51

?
TIGR04308: repeat_SSSPR51 
surface protein repeat SSSPR-51
This repeat domain is designated SSRS51, Streptococcal and Staphylococcal Surface Protein Repeat of size 51. These repeats are homologous to the listerial repeats of pfam13461, but shorter on average by about 8 amino acids. Up to twelve tandem repeats can occur, on some of the longest proteins of their respective species. Nearly all member proteins carry the C-terminal sortase target sequence, LPXTG, recognizable by model TIGR01167. The repeat structure and probable surface location suggest a possible adhesion function. A protein with this class of repeats may have other classes as well.
Statistics
?
PSSM-Id: 275115
Aligned: 87 rows
Threshold Bit Score: 36.7365
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ZP_07645962 1914 RWI-DE-DGNVLKPSVKtgneKDAEHG----SIPGYEFV-RTVIAENEPVmTHIFRKVSG 1966 Streptococcus mitis SK564
ZP_08069754 2118 VWV-DV-NGKPLKPSAP----GTEEAG----KVPNYKLVgTTVDPTTGNV-IHVFTPTPV 2166 Streptococcus vestibularis ATCC 49124
ZP_08069754 2333 VWV-DI-NGKPLKPLAE----GSNPAG----EVPGYELVgTKVDPATGNL-LHVFKPKGS 2381 Streptococcus vestibularis ATCC 49124
ZP_07644449 1547 VWV-DV-NGKPVKPLAE----GDNPAG----SIPGYALVeTINVEGTGNV-IHVFKRTTN 1595 Streptococcus mitis NCTC 12261
ZP_03929923  792 NWIeDK-TEKPLQDSQE----GAKPDTdg-nDIAEYKYLrTKVDNKTGDV-TNIYHKIVT 844  Anaerococcus tetradius ATCC 35098
ZP_03929923  630 NWV-EEnTGKVLKTKED----GAKPDTeg-dDIKDYHKVkDLTDQKTGDV-TNIYHKIIT 682  Anaerococcus tetradius ATCC 35098
ZP_03929923  845 NWKeDH-KGTVLRTQEV----GEKPDTdg-nDIENYKWIrTDTDPDTGDI-TNYYHKIKT 897  Anaerococcus tetradius ATCC 35098
ZP_03929923 1009 NWVeDG-KNDPLKPQED----GAHPDNeg-dDIKDYYLVmTKEDKKTGDV-LNVYRQRTT 1061 Anaerococcus tetradius ATCC 35098
ZP_03929923  683 KWI-EEnTNKVLRGPED----GSKPDDdniwDIPEYKLVrTETNPDNGDV-TNIYKKIDV 736  Anaerococcus tetradius ATCC 35098
ZP_03929923  898 YWV-EMeKNNTLKDPED----GAHPDDdgvwDIPDYGLVrTTVNPDTGDV-TNIYKKIVP 951  Anaerococcus tetradius ATCC 35098
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap