Conserved Protein Domain Family
GeoRSP_rSAM

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TIGR04303: GeoRSP_rSAM 
GeoRSP system radical SAM/SPASM protein
Members of this family are radical SAM/SPASM domain proteins from a cassette restricted to the genus Geobacter. Genes always found adjacent include a non-radical SAM protein with a closely related SPASM domain and a short stretch of N-terminal homology as well to this family, and also a PqqD-like protein. The three-gene cassette is designated GeoRSP for the genus Geobacter, this radical SAM protein, the SPASM domain protein, and the PqqD family protein.
Statistics
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PSSM-Id: 213916
Aligned: 3 rows
Threshold Bit Score: 641.964
Created: 10-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
REF_tigr:GSU2905  64 LEAPLTINWAINNTCNFACRHCYSRGDTHEELPRDVLLACLGKAAAAGVFSVNFGGGEPLLHPGLLEIARHASGSGLRIS 143 Geobacter s...
WP_012648423       6 LKAPLTINWAVNNNCNFACRHCYSRNDAMKEIDCSMLCQCLEKVATAGVMSVNFGGGEPLLRQDLATIASCAAQSGMRVS 85  Geobacter d...
WP_011938664       7 LKAPLTINWAINNNCNFFCRHCYSRSDTTEELSGEVLCAAMKRVAATGVLSVNFGGGEPLLRRDLLAIASCAAGCGMRVS 86  Geobacter u...
REF_tigr:GSU2905 144 LNSNGWLIDRDTAAALRDAGFTRVGISIDSHLPRVHDRFRGVDGSHGRAVAALRHLAGAGIATSISTVICRINHTAIDDL 223 Geobacter s...
WP_012648423      86 MNSNGYLIDRKKALELKEAGFSKVGISIDSHVPAIHDHFRGVSGSHGRAVNALAYLQEAGIKTSISTVICKLNHRDVAPL 165 Geobacter d...
WP_011938664      87 MNSNGYLIDGEKAVALKNAGFSKVGISIDSHEALVHDRFRGVAGSHERAVNALGRLREAGIKTSISTVICTFNHEQIDNL 166 Geobacter u...
REF_tigr:GSU2905 224 VTFAREQGVGQLNFHNFKCSGLGLSHRDELDLSPAEWREFYRGALAARERESGLDVSLDDPIIALLGARDAGSLVKGSVC 303 Geobacter s...
WP_012648423     166 IDLAEKLHVEQLNFHNFKCSGLGYSNRDDLDLTPEEWQSFYAEAIMEKQRGRKLDISLDDPIIASLGMHDTNNMVKGSVC 245 Geobacter d...
WP_011938664     167 IEFALANKVSQLNFHNFKCSGLGLANKDELDLTPVQWQEFYRKALRAKEQVKELDISLDDPIIASLGLKSGSSLVKGSVC 246 Geobacter u...
REF_tigr:GSU2905 304 GKLSLNIKTNGDMTPCGFIPVVIGNIVRDDLKQVWRDSAVLAALRTKKPTGKCAGCSAYEDCLGGCSARALALTGDLNSP 383 Geobacter s...
WP_012648423     246 GKLSLNIKSNGDITPCGFIPIVIGNILADDLRELWKSSSILEKLRNKVATGKCVGCSDYNECLGGCSARALALTGDFNSP 325 Geobacter d...
WP_011938664     247 GKLSLNIKSNGDITPCGFIPVVIGNIIRDDLKEIWDNSPVLERLRHKTPTGKCASCSDYGECLGGCSARALAMTGDFNSP 326 Geobacter u...
REF_tigr:GSU2905 384 DPHCW 388 Geobacter sulfurreducens PCA
WP_012648423     326 DPHCW 330 Geobacter daltonii
WP_011938664     327 DPHCW 331 Geobacter uraniireducens
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