Conserved Protein Domain Family
glyco_like_cofC

?
TIGR04282: glyco_like_cofC 
transferase 1, rSAM/selenodomain-associated
Members of this protein family show strongly correlated phylogenetic distribution, and in most cases co-clustering, with an unusual radical SAM enzyme (TIGR04167) whose C-terminal pfam12345 domain often contains a selenocysteine residue. Other members of the conserved gene neighborhood include another putative glycosyltransferase, an alkylhydroperoxidase family protein (TIGR04169), and a phosphoesterase family protein (TIGR04168). The cassette is likely to be biosynthetic but its exact function is unknown. [Unknown function, Enzymes of unknown specificity]
Statistics
?
PSSM-Id: 275102
Aligned: 96 rows
Threshold Bit Score: 141.1
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ZP_07970935    7 LVVMARWPAPGRCKTRLARHTGRLAAAQIQRQLTQHSLEVSGRWsqrhqhKLLMAVDGLGP---RGLRRWQGQLqalapg 83  Synechococcus s...
ZP_02088707    5 IIIFTRVPEPGQTKTRMMPALSAKGCARLHTCFLEDIKRECGKVe----gQLFVCFTPDDGr--ERLYPVFGRG------ 72  Clostridium bol...
ZP_08848761    5 IIVFTRVPVAGQTKTRLMPYFSPQECAGLHTCFLKDIAGQCQKTq----aDFYICYTPDDKg--AVLKNIFGDD------ 72  Dorea formicige...
ZP_02432589    5 IIIFTRVPIPGKTKTRMMPTLTPDQCEHLHTCFLKDIRRVCEQCa----aDIYVCYTPDEEkykRQIMDILGTE------ 74  Clostridium sci...
ZP_04451961    4 FIVFTRIPVENKTKTRLLPYYTGKQCVGLHTAMLYDMAETIEKLdt--siKTYIYYLPEGDl--SILKNIFGEK------ 73  Abiotrophia def...
ZP_06425878    5 LIIFTRIPIPGYTKTRLEKKLSQLECARLHTCFLNDLELMTSRIe----gDSLIVFTNSGAe--SYIGPGVLKDif--ky 76  Peptostreptococ...
ZP_04775942    5 IIFFTRVPKVGTTKTRLYDFVSPDTAVEIQKKLMKKNYNVLKKCg----eEIAVYHDSQSId-dKVMENILENR------ 73  Gemella haemoly...
ZP_08260635   18 IILFTRVPKEGTTKTRLYNFVQPKQAVEIQTKLLKKNYKLLSGLn----kELFVFHDGNERd--NEFMNSIIPA------ 85  Gemella sanguin...
WP_011986925   4 LIIMTRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLke--smDIYVTYGDEGGf--SIIEPLVPSF------ 73  Clostridium bot...
WP_012290312   4 VILMTKIPNKN-SKTRLSTILSENERIKFSGNLINKNVNIIKKy------KVFLSLTPD-----ELFEDYTKNSp----- 66  Finegoldia magna
ZP_07970935   84 VQLG-PQGGGNLGCRMQRQLQRAFQAGaERVIVIGTDLPALETSDLDAAAEALLRAPLVLGPARDGGYWLIGLNRsgFRR 162 Synechococcus s...
ZP_02088707   73 EHYI-SQRGSGLGERMYQAIREVLGRGyEACILMGTDVPEVRSEYLERAFGLLEQNDVVLGPTRDGGYYLVGMKK--PQR 149 Clostridium bol...
ZP_08848761   73 KIYF-PQMGESLGERMHMAIQRVLAKDyGSCVLIGTDVPEIKQADLDYAFRLLDVHDIVLGPTQDGGYYLVGMKK--PVR 149 Dorea formicige...
ZP_02432589   75 KNYF-PQKGNDLGNRMCNAFEEVLKKEyDSCLLIGTDVPELQTSCLMKAFEVLDKKDVVFGKTVDGGYYLVGMKK--LYP 151 Clostridium sci...
ZP_04451961   74 AEYR-KQTGESLGDKMYNAIFEVLSDGaEMVSLSGTDIPELSSTDVEKSFKLLIDKDIVLFPTEDGGYYLVGMKK--ADK 150 Abiotrophia def...
ZP_06425878   77 ADVFiEQRGQDIWQRMKNAFSDSFDLGyDSLVLIGSDIPEICSVHINSSLKALDDSDIVITPTEDDGYCLIGMNN--LDN 154 Peptostreptococ...
ZP_04775942   74 -EFS-YQVGETLGDKMYNAIDEE-LKCsDKVILLGSDIYNLQENMIHAAFKKLDEHDVIINPSVDGGYFLIGMKK--AIK 148 Gemella haemoly...
ZP_08260635   86 DKFF-YQRGENLGDKMYNAIKDVIEDG-DKVILLGSDIANLSQNIIDMAFKNLNTVDIVINPSEDGGYFLIGMKK--PIK 161 Gemella sanguin...
WP_011986925  74 ARVF-PQKGKDIGQRMENAVGEVLKKGyEKVVLIGSDIPEIQIKDILRAFDILEYKDLCFGPTFDGGYYLVGMKK--LNK 150 Clostridium bot...
WP_012290312  67 YDCI-RQTGDDIGQRMKNSIKEVLSRGySKVVLIGSDIIDFDGEIFDEAFDKLEDYDVVFSPTEDGGYSLIGMKK--SHD 143 Finegoldia magna
ZP_07970935  163 agsRLM-SGIPWGSDQVLQRSLAAAAARQLQAVLLRQQNDLDEPSDL 208 Synechococcus sp. CB0205
ZP_02088707  150 ---DVF-DVEGYGQGSVLRDTMYRLKTAGCRVGLTETLWDMDVYQDL 192 Clostridium bolteae ATCC BAA-613
ZP_08848761  150 ---EVF-EKQTYSHASVLENTAKAAFEAGYTVGFARTLHDIDEKEDI 192 Dorea formicigenerans 4_6_53AFAA
ZP_02432589  152 ---QVF-GLEQYGHSSVFYETLKRLQAESIRVGYTEELLDMDTPSDL 194 Clostridium scindens ATCC 35704
ZP_04451961  151 ---TIF-DIEGYGGNNVFEKTAAKIGGLGLSLGVGRVHRDIDTKEDI 193 Abiotrophia defectiva ATCC 49176
ZP_06425878  155 ---EVF-DMGEYEGQTVVERTIELAKKTTDKIKINDPLVDIDEEEDI 197 Peptostreptococcus anaerobius 653-L
ZP_04775942  149 ---EVF-DLPSYGDNTVLENLLTVCNEQKLSYYLGEAGLDIDTKEDL 191 Gemella haemolysans ATCC 10379
ZP_08260635  162 ---EVF-ELPSYGDNTVLENLITVIKNKNLSYYIGEVGLDIDTREDL 204 Gemella sanguinis M325
WP_011986925 151 ---IVFkKDIKWGDKSVFYSTMDLLNKENLTVDFTEKYEDIDTKEDL 194 Clostridium botulinum
WP_012290312 144 ---VLF-ENKKYSNPNVENDLENSLIEHDLSYYKLKETHDIDTDIDf 186 Finegoldia magna
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap