Conserved Protein Domain Family
peripla_PGF_1

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TIGR04281: peripla_PGF_1 
putative ABC transporter PGF-CTERM-modified substrate-binding protein
Members of this archaeal protein family resemble periplasmic substrate-binding proteins of ABC transporters and appear in gene neighborhoods with permease and ATP-binding cassette proteins. Notably, essentially all members also have the PGF-CTERM putative protein-sorting domain at the C-terminus, while more distant homologs (excluded by the trusted cutoff) instead have what appear to be lipoprotein signal peptides at the N-terminus.
Statistics
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PSSM-Id: 275101
Aligned: 16 rows
Threshold Bit Score: 350.504
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_08043904   34 CTYPVTKTDATGTNVTIEEEPSRIVTLSPSAAQTMWKIGGKEKVVG--V--SKYSAYLDGASAKANVSGSGMtaAVPEKV 109 Haladaptatus pa...
ZP_09029015   38 CEFPLTESDASGHEVTVDAEPERVVTLNPSAAQTMWEIGGREKVVG--I--SQFGGYLEGADSREVVTSGFPstVNVEQV 113 Halobacterium s...
WP_015763738  34 CEFPHSTTDATGTEVTLDSAPDRVVALQPSDAQTMWEIGARDQVAG--MprNANTAYLNDTGNRTDVTNDDGt-tDVEAV 110 Halomicrobium m...
WP_006056685  36 CTFPYTATDATGTEVTLDSDPERVVTLNPSAAQTMWELGASDEVVG--V--SKYATYLDGADEKQNVSGANG--PSVERV 109 Halogeometricum...
WP_023843131  34 CSFPVTMTDATGTEVTIEERPERVTTTNPSAAQTMWEIDGRSQVVG--L--TQYASYLDGAESRTNVSASFG--VNVERV 107 Haloarcula hisp...
WP_004043827  38 CTFPVTVTDATGTEVTITDDPERVVTTNPSAAQTMWELGARDEVVG--V--SQYAMYLDGAADKGNVSGSGGl--NVEAV 111 Haloferax volcanii
WP_008417574  36 CEFPVDVTDATGEEITLEEEPERIVAMQPSDAQTLWEIGAREKVVG--MpvSQYTEYLEGYDEPTDITADDGvtVNTEEV 113 Halalkalicoccus...
WP_014050371  45 CSFPFSATDATGTEVTLEEAPETVTTLGPSAAQTMWEIGARDQVVG--L--DQFSTYLAGAESRTNVSAS-GfgYSTEAV 119 halophilic arch...
WP_015909629  53 CGFPVEMTDATGTTITLDERPERITTINPSAAQTLWEIGARDRVVG--V--TQYAAYLDGAGEKTDVSAE-GfgVSVERV 127 Halorubrum lacu...
WP_011323615  37 CSFPVTETDATGTEVTVEERPERIVVLQPSAAQTVWELGAEDRVVGapV--VPYTSDLDGIEEAENVLQVDDftVNQEAV 114 Natronomonas ph...
ZP_08043904  110 VAQEPDLVLAPNV---I---SDETVKKLRDAGLTVYKFRESKSIDDIYAKTELTGRLTGECDGAQRTVSWMKDRIETVHQ 183 Haladaptatus pa...
ZP_09029015  114 ISLEPDLVLAPNT---I---NNDTVQQIRGAGIAVYRFELADSIDSIYNKTQLIGRLTGECAGAEETVTQMRDRVQTVEE 187 Halobacterium s...
WP_015763738 111 VGANPDLVLAANA---T---RSDTVDQLRNAGLTVYHFPLATSLDDIANNTETVGRLTGNCEGATETVAEMDERVETVRE 184 Halomicrobium m...
WP_006056685 110 LDANPDVVLVPNS---TyafAKDRVDQIRAQGTTVFVFETGSSLSFVANKTEQIGRLTGNCEAGRQSAQEIRNSADLMRE 186 Halogeometricum...
WP_023843131 108 VGTNPDLVIAPNA---S----AGDVAPLRQAGLTVYHLPAATTIEDIRAKTATIGRLTGNCEGASEANAWMDANVDAVRQ 180 Haloarcula hisp...
WP_004043827 112 IGLEPDLVLVPNSsynA---EPDRIAQLRSADIPVVVFESGESLAAVADKTERVGRMTGNCEAGVERAAEMRDSMANMEQ 188 Haloferax volcanii
WP_008417574 114 IELDPDLALASAV---A---DEEQVEQLRDAGITVYQVQDATSVDDVRGNVETYGQLTGECAGAAETIDWMDEELGAIEN 187 Halalkalicoccus...
WP_014050371 120 VGTEADLVLAANV---A---PNDTIAQLRNAGMTVFKFEAATSIEDVANKTALTGALTGNCEEAARTNEWMMQNVDTARE 193 halophilic arch...
WP_015909629 128 VDTDPDLVLAPNA---S----AGQVEALREQGLTVYHFPAATSVEDIAEKTEITGRLVGNCEAAAETNEEMNQAVTDAEN 200 Halorubrum lacu...
WP_011323615 115 VELDADLVLAPNI---V---PDDTVTSLREADQQVFKFGFGTSLSFVADKTALTGQLVDACDAAAEVNDDYWDRIDAVEE 188 Natronomonas ph...
ZP_08043904  184 AVEG-EDSPKVMYVMsGGYTAGSGTFMDTIITQAGGTNVAAEAGIKS-YQPISSEVVVEQQPDWFILS---------A-G 251 Haladaptatus pa...
ZP_09029015  188 AVAG-EQKPSVYWGTeAGFTAGPNTFVGQIIERAGGQNIAAEANSSApYPQLSEEFIADQDPEFVVVSvypeqlgneS-R 265 Halobacterium s...
WP_015763738 185 TVSD-RDRPRVLYYF-YQYTTGNETHIHDLIETAGGQNVAAEAGLSG-YQPINAEVVADSDPQWLVYP---------S-D 251 Halomicrobium m...
WP_006056685 187 VLAD-EDKPVALNYF-YTYTSGSNTFIGDVMTTAGLTNGAAEANITG-FAPINTETVVEMNPEYIIVP---------T-G 253 Halogeometricum...
WP_023843131 181 VTADaEDRPTALYPLgGGYVAANNTFVTSLIELAGAENVAAR-NHTQ-YPQLSDEVILRFDPDVLFVTe--------N-T 249 Haloarcula hisp...
WP_004043827 189 ALDG-AERPVGLNSF-FGYSSGSGTFISDIMTTAGLRNGAAEANLTG-FAQINEELVVEMNPEYIVVP---------D-H 255 Haloferax volcanii
WP_008417574 188 AVEG-EDRPTVLFAMgDGYTAGQGTFIEDVIETAGGENLASAAGIEF-YGQISEEVVVSEDPDWIVYP---------D-T 255 Halalkalicoccus...
WP_014050371 194 ATSD-AETPRVLAPLgSGYVVGGGTFIDAVITASGGENVAAR-NHTG-YPSLSDELILELDPEILVLQpw------mT-M 263 halophilic arch...
WP_015909629 201 RTAD-LDRPAALYPLgDGFVAGGNTFINEIMQIGGTDNVAAAEG-DG-YPQLSNEIILQTDPKLILVT---------DpE 268 Halorubrum lacu...
WP_011323615 189 RAAA-VEDPHVMY-FtDNHTAGSGTFIDDLITTAGGVNVAAEAGIDG-YDEINEEALVEWNPDVIVAS---------D-A 255 Natronomonas ph...
ZP_08043904  252 SKIPDD----YGETPAAKENRTVSLNPNYVSQPAPQ-IVTPITKLAKTLHPEAYAQANVTTTTET--------------- 311 Haladaptatus pa...
ZP_09029015  266 SYIPQDs--vIRNTTAWEEGNIVVVDTNHLSQPAPR-IVEPMTQMAQAFHPEAYADANTTTTTTT--------------- 327 Halobacterium s...
WP_015763738 252 ASQPTGa--pYNETTAVQREQVLSVDANYVSQPAPR-VVLALEAMAEAFHPDAFETATTSATPAT--------------- 313 Halomicrobium m...
WP_006056685 254 ATVPDTe--aWNSTTAVQEGNIIEVNSNYLQQPAPR-SVDAAETIMQAVHPEAFEEYQSMKAEAE--------------- 315 Halogeometricum...
WP_023843131 250 ANIAETe--pYASTTAGETNSTVSARARNINQPAPRsVVSFAHNATAQLYPDRYDADSYVPRSAV--------------- 312 Haloarcula hisp...
WP_004043827 256 APVPSSp--aYNSTTAMQEGNVIVIEAHKLQQPAPR-AIEASEAILEAVHPDAYERYQQLETESVtastesatetttaad 332 Haloferax volcanii
WP_008417574 256 FEEPPVseqvIESTTAGQEDQIVQVDSDRMNQPGPQ-VVLAVQTLAETFHPDVYAAQGDASGQED--------------- 319 Halalkalicoccus...
WP_014050371 264 TGVAEQe--pYASTTAGENNATVVVNANYLNQPAPRsVVYATRNLTEAFQPDAYASAEWTARSEV--------------- 326 halophilic arch...
WP_015909629 269 ASILDEe--pYASTTAGVEGNYVVMNVNYLNQPAPRsVIESTETLATAVEELQTEDEEAADGEDT--------------- 331 Halorubrum lacu...
WP_011323615 256 EPLPETa--aYESTVAVEHGQVVTVDSNDVSQPAPR-LVYALETIADGL-----ADAETADRPTD--------------- 312 Natronomonas ph...
ZP_08043904  312 -TNTDTSGTDSKTT------------TTTA------------ATTT-------------ESNGQ-----PGLGV--PVAV 346 Haladaptatus pa...
ZP_09029015  328 -TAAPTTTTADAPA------------TTTT------------TDGE-------------SGGGV-----PGFGV--PAAI 362 Halobacterium s...
WP_015763738 314 -TESATPDTITESE------------TPDT------------VTESatpdivtesatvtTDGSG-----PGFGL--VGTV 361 Halomicrobium m...
WP_006056685 316 -ATTTESTETTTQTttaqstttqavnDTTT------------SAQTa------------TGADT-----PGFGV--ALTL 363 Halogeometricum...
WP_023843131 313 -TPAVTQTSEPTPA------------DHTP------------STDQp-----------tTDASG-----PGFTA--VGAL 349 Haloarcula hisp...
WP_004043827 333 aTATDATETESTEA------------TTTE------------SSDSt------------TESDA-----PGFGV--VASL 369 Haloferax volcanii
WP_008417574 320 -GDGGASA---------------------------------------------------DGEDQ-----PGFGI--VAAV 340 Halalkalicoccus...
WP_014050371 327 -TLETATPTPESQT------------EPTGtemttatatepmATESp------------TSTDG-----PGFGI--GAAI 374 halophilic arch...
WP_015909629 332 -TDGENGTNDGENG------------TSDG------------EDGTs------------DGEDGsesqaPGFGV--VTal 372 Halorubrum lacu...
WP_011323615 313 -ATVDDQ--------------------------------------------------------------PGVGIapAAAG 329 Natronomonas ph...
ZP_08043904  347 AAVAL-VGLLARR 358 Haladaptatus paucihalophilus DX253
ZP_09029015  363 VAVLG-AALLARR 374 Halobacterium sp. DL1
WP_015763738 362 LALVAtLALGVRR 374 Halomicrobium mukohataei
WP_006056685 364 VSMLAaALLATRR 376 Halogeometricum borinquense
WP_023843131 350 LAVLAlVSTLSRR 362 Haloarcula hispanica
WP_004043827 370 AAI-GaAFLLARR 381 Haloferax volcanii
WP_008417574 341 AALVAaGFLFVRR 353 Halalkalicoccus jeotgali
WP_014050371 375 AALAGlSVLLTRR 387 halophilic archaeon DL31
WP_015909629 373 iaalaaaliarrq 385 Halorubrum lacusprofundi
WP_011323615 330 LVLAVvAGLLVRT 342 Natronomonas pharaonis
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