Conserved Protein Domain Family
geopep_mat_rSAM

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TIGR04280: geopep_mat_rSAM 
putative geopeptide radical SAM maturase
This family is the radical SAM/SPASM domain putative peptide maturase for geopeptide, described by model TIGR04229. The SPASM domain (see model TIGR04085) frequently marks peptide-modifying radical SAM enzymes.
Statistics
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PSSM-Id: 275100
Aligned: 8 rows
Threshold Bit Score: 739.213
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_05310755    1 MNFSLYLMIFPSPDRPGYFLLYSTLRGSVAAVSAETLTAIRKGTLPEAECE-ALARLGMLVENRDAEREQVRCMIERANS 79  Geobacter sp. M18
YP_385677      1 MILSRHVKVFPCTEQPGHLILFSCRTGAVLRVPAPLLEAARGGTLSPKPAE-TLSRHGFLAEDPGTEQREMLAWFDRINA 79  Geobacter metal...
YP_384207      1 MHLSRYLKRYSCHERPGHLLLFSTRTAAIAIVPEKVIANIEQGAISPATAE-TLSRLGFLVPDTEVEAEQVRQLFTTING 79  Geobacter metal...
WP_012648280   1 MPLSRYLKIYPCPDKADSFIVYSTRKGSLIRVSSALLAAAREGTLGEADRR-TLSRLAVFTEDLDAERNEMLSTVDRANR 79  Geobacter daltonii
WP_011939294   1 MRLSRYIKIYPYAEKPGYSLLYSTRRASVILLNEATLKAAREGTLSQANQE-TLHRLGFLVPDDHDERQEMLTLFDRTNR 79  Geobacter urani...
WP_012468658   1 MPFSRYVITFPDPQRPGFVILYSTRKGSVVRVPEQLLTSIANNTLSPEERA-TLQQLQLWTDDLEAERSKMAAIIDHTNA 79  Geobacter lovleyi
WP_010942092   1 MVLSRHVIITPCPDRPGTSILFSAKRGALILVDDELLAAIGAGGLDADEEQ-TLAELGFLVPDHDSEQQEMCSFVDESNR 79  Geobacter sulfu...
WP_011735265   1 MQLSHYVTTFPCPDKPGRLLLLATRRCAVMELSDELWQRVRDGGEMEEEEReTLQRLGVLVEDREAEKEEMRETFTRINK 80  Pelobacter prop...
ZP_05310755   80 RIRHFKVTAVLNLDCNLNCAYCFEEDFRRGQYMSEATADLLVGTLARERISRGWDLTVSFYGGEPLLSRDLMRRISQPLL 159 Geobacter sp. M18
YP_385677     80 RRRRCSAVVVLTRACNLACPYCFEANQPSLRQMDGETADLFVSLVEREHLARGRRVSLNFYGGEALLRPDLIRRIAGPLR 159 Geobacter metal...
YP_384207     80 ERTVATIIAVLNMDCNLACTYCFEGGLKGKRYMDHATAERLVSFLDRHYLAEGIAPNLDFYGGEPLLSLDLIRSITTRLK 159 Geobacter metal...
WP_012648280  80 STSRFKAIIVLNLDCNLACPYCYEDPFRGRHYMSAATAGQLIETLVDNQLRQDRDVQLDFYGGEALLSKSLLTKIAAALS 159 Geobacter daltonii
WP_011939294  80 AGREFNAMLVLNMDCNLDCTYCYEGGLKGKRYMTLETADLFIDFVEKNHLAAGKSVDLDFYGGEPLLSVDLIRYVSGRLK 159 Geobacter urani...
WP_012468658  80 HTPLFSATVVLTLACNLACPYCFEEPFRDGQEMSEETGRILVDYLIREQLDQGRNVELRFYGGEPLMATTRLKGIATPLL 159 Geobacter lovleyi
WP_010942092  80 ASRSFAALIILNLSCNLACSYCFEGNRRGAHFMDDDTADRLVAYLVSGPVAEGRSLSLRFYGGEPLLSVPTIRRIARPLK 159 Geobacter sulfu...
WP_011735265  81 ESRHLAVVVALTMACNLACPYCFEAPFRGEQTMDDAIADLLIRRL-NERMAQGLDLTVDFYGGEALLQLTLLKRIATALQ 159 Pelobacter prop...
ZP_05310755  160 AEArshGVKYGFNLITNGTLLTRDTVMNLLPLGLQGAKLTLDGPREIHDGQRPYASGTGSFDTIVGNLTEICDLVAIQLG 239 Geobacter sp. M18
YP_385677    160 ATG---GDRFSFSLVTNGTLLTRTLVKDLLPLGLDGAKVTLDGPPQIHDRLRPFVSGEGSFAAIIANLREVCGLIGIAIG 236 Geobacter metal...
YP_384207    160 ERAagrGLSCSFGMVSNGTLLTGDVACELASLGVTGVQVTLDGTRENHDRYRPFVSGKGSFDVIVRNLLEACDLLDISIV 239 Geobacter metal...
WP_012648280 160 DAAhshGRKFSFGMVTNGTLLTRSTVEELLPLGFTGAKVTLDGPKEIHDRQRPFISGNGSFDTIVSNLKGVWDLIDLQIG 239 Geobacter daltonii
WP_011939294 160 PLVekrGGEYTFNLVTNGTLLTAELARELVPLGLRKAKVTIDGPREIHDAFRPFVSGAGSFDSIVRNVKATCELVGIQFT 239 Geobacter urani...
WP_012468658 160 AAAanrGRTFSFSLVTNATLLTRAVVEELLPLGLKSAVITLDGPPETHDRQRPFVSGKGSFKTIIDNLTAVYDLVTIKPG 239 Geobacter lovleyi
WP_010942092 160 KVMdarGLSFSFSLTTNGTLLTRELVEELIPLGLVGATVTLDGPPDIHDAARPFVGGEGSFSVIFANLKAVADLIALEIG 239 Geobacter sulfu...
WP_011735265 160 RAAgehGVTFQFNIFSNGTLLTRPVVEELLPLGLAAVRLTLDGPPDIHDSQRPFVSGQESFATIMENIRAIHDILPIDLG 239 Pelobacter prop...
ZP_05310755  240 ANFRQENYREFPRLLDQLSSCGITPDKLATVMFTPVVSTAGCA---DHNPACTFSEEPWLMEAIPYLREETLARGYRTPQ 316 Geobacter sp. M18
YP_385677    237 GNYTRDTWREFPQLLDILPVAGLTPERVRLVRFDPVIGREGVAglpDFSEGCGGLTEPWLVEASLVLREEIVKRGYLTSK 316 Geobacter metal...
YP_384207    240 CNYTQENYWGFPSLLDYLLEVGLKPERIAAVNFAPISRIGTGElppEFNDSCASHNMPWVYESQLFLRQEALKRGYSVAK 319 Geobacter metal...
WP_012648280 240 GNFSPDNYRQFPRLLDHLLKEGLTPDKVGLIQFSPIIPKAAKSaeiSFVSGCTSSADAWLAEAALFLREETLKRGYAVHK 319 Geobacter daltonii
WP_011939294 240 GNYTRDNYREFPRLLDHILAEGITPDKLAMVMFAPVTSTMAEYglpEFREGCDSTEEPWLIEASLFLRQEILKRGFNTPK 319 Geobacter urani...
WP_012468658 240 GNFTRDNYRRFPEMLDLLLEAGLDPAQLGPVQFSPIHPKSGLFd--pHAAACVLANEPWLIEANLFLREEILRRGFTVEK 317 Geobacter lovleyi
WP_010942092 240 GNFTPETYREYPRLFDLLVAEGLGPERLALVRFNAVMSAGENRalpEFTGGCASVNEPWLKDATLFIREELLRRGFPAPG 319 Geobacter sulfu...
WP_011735265 240 GNYTRENYRRFPELLDLLIAEGIDPARFKAVGFSPVVPRADGSvagDLGSACLASGDSWTFQAGLFLRAETIRRSFPVPK 319 Pelobacter prop...
ZP_05310755  317 LKPSACVVELEDNLVVDCEGKFYKCPAFMGWEGMSVGSLTEGLREYRDSHGIGNWQVEACLDCCYLPLCFGGCRFITKLR 396 Geobacter sp. M18
YP_385677    317 PAPAACMVEFDTDLVVDTDGAIYRCPAFIGRPAFVAGHLRNGAGSAGDAYGMDAWKQEECLDCAYLPLCFGGCRFMRLVE 396 Geobacter metal...
YP_384207    320 LRPPLCMVELARDLVVTHEGELYKCPAFMGRKGLAVGTLEAGVTEYRESHNLDLWNNEECLDCEYLPFCYGGCRLSRLAQ 399 Geobacter metal...
WP_012648280 320 PAMAACMVEFDDYMAVNYDGRLFKCPAFIGWPELSVGTLTDGISDYSVSHNLNLWKNEQCLDCSYLPICFGGCRFLTLVK 399 Geobacter daltonii
WP_011939294 320 IRSSSCMVEAPDNIIVGFDGTIYKCPAFIGRKEFAVGDLRTGIQDYRDSHKLDLWKNDACLDCAYLPICFGGCRFLKLLR 399 Geobacter urani...
WP_012468658 318 LQMGICMIDLEQTLVVNYDGSLYKCPSLMGWPEFCVGTLADGLGDYHASHRLDIWKNDECLDCAYLPLCFGGCRLLTLQK 397 Geobacter lovleyi
WP_010942092 320 LSPHYCAIEAEDSLIVNHDGTFYRCPAFIGIEGLAAGSLDDGLSDHAASHGLGAWKNEECLSCAYLPLCFGGCRYYGYLE 399 Geobacter sulfu...
WP_011735265 320 LKAGACVVEFENDLVVNWDGGIYKCPIFMGDESLKVGSLAEGINDYRESHNLDLWKNEECLECAYLPLCFGGCRFLARLK 399 Pelobacter prop...
ZP_05310755  397 DKELTEVDCRRKFYDATLERSLLQNlTYL 425 Geobacter sp. M18
YP_385677    397 TGAVDGVACQREYLDATLEAMVRRG-EYP 424 Geobacter metallireducens GS-15
YP_384207    400 TGEINGVDCRRDYYEASLERYVRQEmANT 428 Geobacter metallireducens GS-15
WP_012648280 400 NNAIEGLDCRKEFFDATLEQIVIQDlRYR 428 Geobacter daltonii
WP_011939294 400 DGRIDGVDCRKDYLDAALETYILQDiKLR 428 Geobacter uraniireducens
WP_012468658 398 NGAIDTVDCHRAMLDASLERLVLQDlGVR 426 Geobacter lovleyi
WP_010942092 400 HGRIDRVSCGRDLFDAIVGPFLALEvKYR 428 Geobacter sulfurreducens
WP_011735265 400 TGTMDCVDCRKELLDATLETIIRQDlGLD 428 Pelobacter propionicus
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