Conserved Protein Domain Family
rSAM_GlyRichRpt

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TIGR04261: rSAM_GlyRichRpt 
radical SAM/SPASM domain protein, GRRM system
Members of this protein family are radical SAM/SPASM domain proteins (see pfam04055 and TIGR04085) related to anaeroboic sulfatase maturating enzymes and the peptide modification enzyme PqqE. Members are found primarily in Cyanobacteria adjacent to a short protein, ~150 residues, in which the last ~60 residues tends to be repetitive and highly glycine-rich (see TIGR04260). The arrangement suggests modifications to the repetitive C-terminal region by this radical SAM domain enzyme, but the purpose of this system on the whole is unknown.
Statistics
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PSSM-Id: 211984
Aligned: 12 rows
Threshold Bit Score: 674.829
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01624052   34 IQSTSFCNLNCDYCYLRDRQSKNRLSLDLIEPILKTVLTSPFVG-CDFTILWHAGEPLAMPISFYDSATALIREAERQYK 112 Lyngbya sp. PCC...
ZP_01728640   27 IQPTPFCNLNCDYCYLPNRTLKERLSLDLIEPIFKALFTSPFVG-EFIDICWHAGEPLGVPISYYKEVFKRIEIANKEYN 105 Cyanothece sp. ...
EHJ14230      24 LQGGSFCNLDCDYCYLPDRQTKNRLVRSRIVPIFENLLTSSLVR-DSFTVCWHLGEPLAVPMSFYVEAMEIINGIKTRL- 101 Crocosphaera wa...
ZP_01468449   23 IQSTSLCNLDCSYCYLPDRQKKRVFDLDLIPLLVERILESPYAG-PEFSLVWHAGEPLTLPTSWYDKATTLINQSLERLG 101 Synechococcus s...
ZP_07974101   34 VQSTSLCNLDCDYCYLPDRQKRRVFDLELLPLLLQRILESPFCG-PQVSLVWHAGEPLTLPCSYYDEATAIIERCVQEFA 112 Synechococcus s...
ZP_08956894   14 IQATSLCNLDCSYCYLPDRQKRRIFDLNQLPVLLNRVYESPFWG-PHLSILWHAGEPLTLPCSFYDDATAIVREQTAELQ 92  Synechococcus s...
ZP_05043990   12 IQPTSLCNLDCSYCYLPDRQRRQLLDEGLLRPILQRVLESPYLG-EGLTLLWHAGEPLTRPPAFYTRASEILREMLEPH- 89  Cyanobium sp. P...
ZP_01083673   17 VQPTPFCNLDCDYCYLPSRDDRSRLPLEILDAALERVLESPFLD-GGFTLLWHAGEPLTMPIAFYDAASERIRLALERHD 95  Synechococcus s...
WP_015955277  27 IQPTSFCNLDCDYCYLPHRHLKNQLSLDLIEPILKTVLTSPFVD-DHFTICWHAGEPLAVPISFYRSAFNLIDQAQKKYD 105 Cyanothece sp. ...
WP_010872314  31 IQPTSYCNLDCDYCYLPDRHLKNHLPLDLLEPIMQAIFASPFTT-SNFSLCWHAGEPLAAGLEFYRQAFAKIETYGEKYN 109 Synechocystis s...
WP_012594797  30 IQPTSFCNLNCDYCYLPHRQQQNRLSLDLIDPIFKTIFTSPFCT-SDFSICWHAGEPLAVPISFYESAFEKISQASCQYN 108 Cyanothece
WP_012267487  27 IQPTTFCNLDCDYCYLPDRQLKYKLSLELIEPIFRNIFASDLIDlRGFTIVWHAGEPLTVPISFYTAAIQIIDKLNQEIN 106 Microcystis aer...
ZP_01624052  113 TQPIQIFQSIQTNATLINQAWCDCFRRNEIYVGVSLDGPAFLHDAHRQTYKGTGTHAATMRGISLLQKNEIPFNVICVLT 192 Lyngbya sp. PCC...
ZP_01728640  106 FKQVPIYHSIQTNGILINQAWCDFFKENNIGVGISIDGPDFLHNAHRKTPTGLPTHESVMRGIRCLQDNEIYFNIIAVIT 185 Cyanothece sp. ...
EHJ14230     102 QKEISINYSVQTNGVLLTQAWCDFFQKYNFNVGVSIDGPAFIHDVHRKTPSGLGTHAATMRGIKLLQNNHLDFYIIAVLT 181 Crocosphaera wa...
ZP_01468449  102 AQDLDIDQHVQTNATLINDDWCDCFRRNRIVVGISVDGPEDIHDAHRRFRNGRGSHALAMRGIEALQRNRVPFHCISVIT 181 Synechococcus s...
ZP_07974101  113 DGQVVVEQHVQTNGTLINDAWCDCFQRNRIVVGVSVDGPAAIHDAHRRFRNGNPSHHLTMRGIEALQRHGIPCHVIAVVT 192 Synechococcus s...
ZP_08956894   93 EQGVQIEQHVQTNATLINDAWCECFKRNRIVVGVSVDGPEEIHDSHRRFRNGKGSHALTMRGIRKLQEQEIPIHAIAVLT 172 Synechococcus s...
ZP_05043990   90 -PGVQVAQALQTNGTLINATWCECFRRHGITVGVSLDGPAFLHDSHRRTRLGRGSHADTMRGIRALQEAGIPFSVISVLT 168 Cyanobium sp. P...
ZP_01083673   96 LPPQTIVQSLQTNAVVIDDAWCDCFERNGIHVGVSMDGPAFLHDAHRRTRTGLPTHGAVMRGIAALQRRAIPFQVICVLT 175 Synechococcus s...
WP_015955277 106 TQSCKIFQSVQTNGTLINQAWCDLFKEYQVLVGVSLDGPSFIHDAHRKNRQGRGSHANTMRGISFLQKNEIPIQIISVIT 185 Cyanothece sp. ...
WP_010872314 110 HRQLWFDHSFQSNGILINQAWCDLFKQYPVHVGISLDGPAFLHDKHRKTRTGRGSHAATMRGIEWLQKNDICHSVIAVLT 189 Synechocystis s...
WP_012594797 109 QNEVYFDISFQTNGTLITQAWCDLFKQYPVHVGVSLDGPDFLHNLHRKTRNEKDSYELTMRGLRYLQKNEISNSIIAVIT 188 Cyanothece
WP_012267487 107 PNPYQIEHSLQTNATMITQEWCDFIKEYDLRIGVSIDGPDFIHDAHRRTRTGKGTHASTMRGIKLLQNNQIPFSVIAVLS 186 Microcystis aer...
ZP_01624052  193 QDSLDYPDEIFNFFRSNRITEVGFNMEEAEGVHQHSTLDQQGTEERYRAFMQRFWDLTVQAKGEFKLREFETICTLAYTG 272 Lyngbya sp. PCC...
ZP_01728640  186 QESLDYADEIFDFFWENGITDVAFNMEEIEGINKSSSLDKVGTEKKYYQFIKRFWKLTSQTNDQLKVREFEAICGLICDN 265 Cyanothece sp. ...
EHJ14230     182 ETSLDYPEEIFQFFRDNGIKRVGFNIEEIEGVNRTSSLQKDDISARIRAFWQRFWELTASVKGELQVREFEDVSELILKS 261 Crocosphaera wa...
ZP_01468449  182 ADAMEQPERMYRFFRDHGINDVGFNVEEKEGINTSSSMAGSNMEAKYKDFLRTFWRLSEQDGYPVVLREFEQVISLIQDD 261 Synechococcus s...
ZP_07974101  193 AAAMEQPEAMYRFFRDNNIEAVGFNVEEQEGVHTSSSMQGQEQEERYRQFLTRFWELSEADGHPLMLREFQQVIDLIQRN 272 Synechococcus s...
ZP_08956894  173 SAAMEDPERMYSFFRDNGIHDLGFNVEEQEGVNASSSMQGISREKQYHHFLKCFWECNQRDGFPIRLREFDQITEMMISG 252 Synechococcus s...
ZP_05043990  169 EDSLQHADALVDFYLEHGISEVGFNMEETEGVHKRSSLGGESCEDQYRRFLGRVWDRVVEAGGALRIREFEDLYTFIASR 248 Cyanobium sp. P...
ZP_01083673  176 ADALDQADALYDFFTGAGITDVGFNMEETEGENLRSTLERPDGERRYSAFLERFWQRMRAEPGRLRLREFDGITSLACGE 255 Synechococcus s...
WP_015955277 186 EDSLDYPDEIFNFFMEHDLTDVGFNLEETEGVHQCSSLDKAEIPGRYRAFMQRIWDLTAQSQGKFKLREFESICSLIYND 265 Cyanothece sp. ...
WP_010872314 190 EESLDYPDEIFHFFRDHNLLDVGFNMEETEGINTESSLNKQGTLQKYRQFLERFWQLTSTSEPEFRVREFECLCNLIYTE 269 Synechocystis s...
WP_012594797 189 KDSLDYPDEMFNFFIENSITDVGFNMEETEGINQTSSLDSQGLTQKYKAFIQRFWQLIAESKVEFRLREFEFIGSMIYTG 268 Cyanothece
WP_012267487 187 DISLDYPDEIFDFFLENKIRYVGFNIEEIEGTNRSSSLQNNGVDERYRNFMQRFYGRVKEAENLLQVREFDDLYSLIC-- 264 Microcystis aer...
ZP_01624052  273 DRLGYTDMNQPFVIVNFDHQGNFSTFDPELLSFKIKEYGDFVLGNVLHNTLESVCQTEKFQKIYQDMAAGVVQCRQSCEY 352 Lyngbya sp. PCC...
ZP_01728640  266 QRLAKTDMNHPFAILNIDYLGNFSTFDPELLSVDIKPYGNFILGNVLTDNLESVCESEKFKEIYRDMTKGVESCRQTCDY 345 Cyanothece sp. ...
EHJ14230     262 SGRLKNQMSRPFAIVSVDYQGNFSTYSPELLTMKSDHYGDFILGNLVNDSLESACDHPKFWKLLQDITAGCSLCEDNCSY 341 Crocosphaera wa...
ZP_01468449  262 QRMTQNELNRPFSILSVDAQGDFSTFDPELLSVASDRYGTFNLGNLKTHSLEESTRTDSFQRLLQDMTQGVETCQKGCEH 341 Synechococcus s...
ZP_07974101  273 RRLNQNELNRPYSILSVDWQGNFSTFDPELLSVSSERYGSFNLGNIRDTSLLEAAHSPRFQQLWGDVSSGMARCQSGCDY 352 Synechococcus s...
ZP_08956894  253 QRLLQNEMNRPYSILSVDSAGNFSTFDPELLSVETQKYGLFNLGNIRDQSLIAATESETFQQLLQDMTAGTALCRDQCDY 332 Synechococcus s...
ZP_05043990  249 SRVDHSDLNHPMAIVSVDHQGNFSTFDPELLSVETS-YGLFNLGNVLTDSLESACSHPRFQRMWADMQAGIEACRSSCSY 327 Cyanobium sp. P...
ZP_01083673  256 ARMESTDMNTPFAIVNVDAKGNFSSFDPELLAVATAEYGDFIFGNVLQGSLEAALSTEKFQRVWREIKAGVDLCRRDCAY 335 Synechococcus s...
WP_015955277 266 ERLNNTDMNAPFVIVSFDYLGNFSTFDPELLSVKTTHYGDFILGNVFQDSLLSVCYTEKFQKIYQDMKAGVELCQETCQY 345 Cyanothece sp. ...
WP_010872314 270 DRLDHTDMNRPFAIVSIDHQGNFSTFDPELLAIKTPQYGDFIFGNVLTDSFASICQTEKFQRIYHDMTQGVEKCRQTCDY 349 Synechocystis s...
WP_012594797 269 DRMINTEMNQAFRIVNIDYQGNFSTFDPELLSIKTEPYGDFILGNVLTDTLDSVCYTKKFQKINQDMTEGVNLCRQTCEY 348 Cyanothece
WP_012267487 265 QKYSFQGQFTPFTMINIAHNGDFSTFSPELLSMKSDVYGDFILGNITQHDLRSIDQTDKFKKLDRDIQAGVKMCQKTCPY 344 Microcystis aer...
ZP_01624052  353 FGLCGGGAGSNKYWENGTFNCTETKACRYRIKVIADIVLEGLEN 396 Lyngbya sp. PCC 8106
ZP_01728640  346 FGVCGGGAGSNKYWENGRFNSTETQACRYRTKIVTDVVLEALEN 389 Cyanothece sp. CCY0110
EHJ14230     342 FSLCGGGAPSNKYWENDTFVCSETMACRYNKQLVVDVVLDGIER 385 Crocosphaera watsonii WH 0003
ZP_01468449  342 FGLCGGGNGSNKFWEHGTLASSETNACRFGTKIPVEVLLERFEE 385 Synechococcus sp. BL107
ZP_07974101  353 YGLCGGGMGSNKFWEHGTLDCSETSACRFRTQIPVQVLLDRFEA 396 Synechococcus sp. CB0101
ZP_08956894  333 YGFCGGGTGSNKYWEHGTLASSETCACRFSTQIPVKVLLEQIED 376 Synechococcus sp. WH 8016
ZP_05043990  328 FGICGGGAGSNKYWETGSFRASETQACRYRIQHVADVVMAKLEE 371 Cyanobium sp. PCC 7001
ZP_01083673  336 FGLCGGGAGSNKYWEHGRFDCSVTEHCRYRIQLVADVVLSGMER 379 Synechococcus sp. WH 5701
WP_015955277 346 FGVCGGGAGSNKYWENGTFCSTQTKACQYRTQIITDIVLQELEK 389 Cyanothece sp. PCC 7424
WP_010872314 350 FGLCGGGAGSNKFWENGSFNSTETLACRFRIQQVAEVVIGALEE 393 Synechocystis sp. PCC 6803
WP_012594797 349 FGLCGGGAGSNKYWENGTFNSADTNACNYRIKVITDVVVEALES 392 Cyanothece
WP_012267487 345 FSLCGGGAPANKYYENGTFRSTETIYCRYTKKIIADIILEALEK 388 Microcystis aeruginosa
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