Conserved Protein Domain Family
SCM_chp_ScmC

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TIGR04249: SCM_chp_ScmC 
SynChlorMet cassette protein ScmC
A biosynthesis cassette found in Syntrophobacter fumaroxidans MPOB, Chlorobium limicola DSM 245, Methanocella paludicola SANAE, and delta proteobacterium NaphS2 contains two PqqE-like radical SAM/SPASM domain proteins, a PqqD homolog, and a conserved hypothetical protein. These components suggest modification of a ribosomally produced peptide precursor, but the precursor has not been identified. Members of this family are designated ScmC.
Statistics
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PSSM-Id: 275080
Aligned: 3 rows
Threshold Bit Score: 466.691
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012899634  10 FSFNLFGGQSWYIIANDNAKLFTKTFAGIMGLSESFTCC-SKKMVIIRSFSGNVPSQELLSEAKKIINLPGDKWVFIDEg 88  Methanocella pa...
WP_012466811   5 YILGFSACKTWLISAEEPLQKWLDFFAHLLGLSCSDGIPfGMETDTIHCRAGSRDDFHPYTFLTEACRDAEEERLYRFQ- 83  Chlorobium limi...
WP_011699047  20 YGLRLGDGDAWFLTASADARDWLDRFARILGLEGGTG---SEPLRIVFSR-GSDPHGKGYP--------PVDPWDPRRRr 87  Syntrophobacter...
WP_012899634  89 FAKIWq-nTETLDTICDIGTEGPYEVEIFKMSYLLYPFYSRAINSGGLPFHCALIEKNGHGILLAANGQTGKSTCCRRIS 167 Methanocella pa...
WP_012466811  84 TMQIR---RYPQGIIADVDDSGGLAFQIVSMWYLLYPAYRDVLERGGIPVHAALVEKDGEAYLIAGSSGKGKSTCCQRIG 160 Chlorobium limi...
WP_011699047  88 TVRVRcadKACSEVLCEILKDTPDDVRWVSMWSALMPVYRRARERGGLPLHAALAERDGKGVLLAAPGGTGKSTACRRLP 167 Syntrophobacter...
WP_012899634 168 PPWHPLCDDEALIVCDAEkNYHAHPFPTWSNFLL-HKPGHTWDAQSHVPVEAIFFLEQASSDKVIPL-LQGTAATEIFTF 245 Methanocella pa...
WP_012466811 161 DGWRCHCDDESLVVPDTD-GYRVHPMPTWSNYIFgGSEEKTWQSMRSFPLRGIFYLDQAETDEVSLFpNDAFKAAFLNDA 239 Chlorobium limi...
WP_011699047 168 APWIARADDETLVVRTRKgGYRAHPFPTWSDFLC-GRVSPARKVERSVPVQAVFFLEQSEKDDVAPL-GQAEAAVMLNGS 245 Syntrophobacter...
WP_012899634 246 AMQAGGRLFYNLEDSEKARIRKQMFNNACDISRKIRSYRLSVSLTGKFWEEIEKVL 301 Methanocella paludicola
WP_012466811 240 VLQFWHRYANFFHETLRKKLHIMIFRNACSIAHVVPAYRLAATIDGCFWKAMENAL 295 Chlorobium limicola
WP_011699047 246 AVEVCTKYWLGLEKEDEIAQRRAVFANACDFARRVPAYALRLSLHGRFWEEVEKAL 301 Syntrophobacter fumaroxidans
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