Conserved Protein Domain Family
SCM_PqqD_rel

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TIGR04248: SCM_PqqD_rel 
SynChlorMet cassette protein ScmD
A biosynthesis cassette found in Syntrophobacter fumaroxidans MPOB, Chlorobium limicola DSM 245, Methanocella paludicola SANAE, and delta proteobacterium NaphS2 contains two PqqE-like radical SAM/SPASM domain proteins, a PqqD homolog, and a conserved hypothetical protein. These components suggest modification of a ribosomally produced peptide precursor, but the precursor has not been identified. Members of this family are the PqqD-like protein.
Statistics
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PSSM-Id: 211971
Aligned: 3 rows
Threshold Bit Score: 156.949
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012466812  19 LANTLIVLREDYDDWAILFNPDDGQSFVLNPVSVFIWKRLDGKHTASDMVSEIRNRFLEVPEHAEASVRVFMEALIDRGY 98  Chlorobium limi...
WP_012899637   8 IANPSVVLREEFDDWALLFDPDTGEVYGLNPIGVFIWKRLDGRHTVEDIYNELISQFDRVPEKSIDHINNFVSDLTKRGL 87  Methanocella pa...
WP_011699050   7 IANPLIVLREEFDDWAILFDPESGNAFGLNPVSVFIWKLLDGHHTVAQIVESIRAECDDVPDDAQDRVIAFVQDLLDRGL 86  Syntrophobacter...
WP_012466812  99 AGCE 102 Chlorobium limicola
WP_012899637  88 AGQE 91  Methanocella paludicola
WP_011699050  87 ARLQ 90  Syntrophobacter fumaroxidans
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