Conserved Protein Domain Family
seadorna_VP4

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TIGR04235: seadorna_VP4 
seadornavirus VP4 protein
This protein family occurs in the seadornavirus virus group, with designation VP4 in Banna virus, Kadipiro virus, and Liao ning virus. Although this family has been suggested to resemble methyltransferases, members show apparent N-terminal sequence similarity to the outer capsid protein VP5 of the orbivirus group, such as bluetongue virus, which also belong to the Reoviridae.
Statistics
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PSSM-Id: 211958
Aligned: 3 rows
Threshold Bit Score: 1022.91
Created: 9-Oct-2014
Updated: 11-Oct-2014
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_694472  10 NAISALSASGFRGYVPDNSVSSALIPRLVVTNEREHVLAGRLKRIEDNIAKNKLTEHDDIEVVKSDYESLANNFEEQIKF 89  Kadipiro virus
YP_460029  10 TKVLDFGLTGMDNYAPDSSLASALKPRPLISNEREHANVVRIDRIEHELVKDRMQEEADRNVLKDDITMFATSLKTIVDF 89  Liao ning virus
ACA50113   13 SQSSIISLTGNDRTVADGTFNSMIMPRAVIANEREHFMKTRIDKIEHDIIRSTKQEMMDRQSLAEDYKALNLAVGQEIKL 92  Banna virus
NP_694472  90 DNATDRALHDFSTQIKIVDSEREKEMTVLLGAVNDNSQAINDIIKDVTVIDNIEKANLILEKVIAVSRATAKTAEIAADG 169 Kadipiro virus
YP_460029  90 DNHTEFVLNNLNSSISKAEQSRVKDENFLLAAINENVDAVNDIITNQQALTAAEKADLIMEQVINSARAVAHTSAAVADG 169 Liao ning virus
ACA50113   93 DVATQHQLNRLGSAMYKADHERETELTDLINRIRENEITVNGILENQKAITAAERADLLLEIVASTAKSVSAAGRAAADG 172 Banna virus
NP_694472 170 VGVVPVFGPSIANGAKIAAHTAEMVANTSEAVKASGILNDLNETFKAITSVHSRPNDLIKSAVKSTNNAVDLAAKLKVMI 249 Kadipiro virus
YP_460029 170 VGVIPIFGPNVASGAKVLSDTAEAIADTTAAIKASQISQQLSTAFSALRTVHEHPNKFIEAAVTTIKTGEDLVPKLKQIV 249 Liao ning virus
ACA50113  173 SGVVPVFGPSVANGIKVGIDIADSVAEAAIAVKESGIITQLNDVYHAFQSVHVAPNDVIKPASVVAGTSTELIGNLQAIY 252 Banna virus
NP_694472 250 DSARRKNDIGLSKISIPSVVVKSTvEWPRVIDAYDTHCIYKLHPTNGSVGLIVEVKNTLISYQVKKQYGKLDSDGFGDTI 329 Kadipiro virus
YP_460029 250 DRSRRANELTFSRVTVPGSIAHSY-AYVSVLDDYDVLMVYHIKPSTGAYGLKASIGSRRVSYSLHGLFGELDSFGFGPEI 328 Liao ning virus
ACA50113  253 SRLRSHSDIGFKKATVGDTIPNSYmVKPVNSTEYASWQLYVIHPVQGSLGLVVQMMGDALTYNVFAQYGTTSASEFGKTV 332 Banna virus
NP_694472 330 ISGGRIVGIAGAKRVVDFHLSVDAAHSLAMVMALQSLSNRLDSTSIVGYFEEYFELGMRVEKPEVDNAFSNHLHDLTVDT 409 Kadipiro virus
YP_460029 329 MSSGVVSLPPIGSRQVEFNTVVNADRCRAMLMALQSPGLSLSDEEYVGYFEQYLCRAIEPTNKTVLSALHSAFDSIHSDS 408 Liao ning virus
ACA50113  333 LTGGATNTALEGTK-VKFQTKVTAQQALALTMALKDAVSMLSQGELIGYFEQYINLALEPDNLSLQDNMHKYHHLLTSQN 411 Banna virus
NP_694472 410 SYIDWHKYETEMLNTHNERKSVLINEVNETLgAGSSVHMVPEGFITLETTPTIIELTPVMKIGAYSVYEHLFGPFVNTGT 489 Kadipiro virus
YP_460029 409 MSNDMHSDHIAMLGHLDTHRQKHKDSLEAEL-PGSSNILVPIGHVSRANSTHTLALKSTFRIGEFRVYDYFIGPFTHSGK 487 Liao ning virus
ACA50113  412 SPIDWNYHDEEMHKWLDSRKTTNYEAMKKKDgAVIADIHIPKVFNDLRNTTLHCKLEGRQTIAGYTVYEYLIGPWAHYGD 491 Banna virus
NP_694472 490 YTYNLVVDVI-----GQPTKW-YTQLVDVRGQVVSSSSLDALPTQPVDLVVGTKGSMsTIPGSSGllvDRRLLRIYVKQP 563 Kadipiro virus
YP_460029 488 FVIGVVIDSMyvnsnTDNRRFvYSQYSGHEGQRINSVVNSSESPIRLELTLDVRSDL-TIEGVEG---DRAVLRIYGVDL 563 Liao ning virus
ACA50113  492 IDYSVVVDAL-----NEETKW-YCEVIGIDGHLLIEKSIQHKPEKILELTVDDDGVT-LFKGKNH---DRLKLKVYVKDS 561 Banna virus
NP_694472 564 KCVRVFCGWKSGVSSFRFSPKTMEEQKAFSHEFSRLHRFLDPNA-ALAITEGSHVWEAY-AKGNYNNPI 630 Kadipiro virus
YP_460029 564 HSVRIITGPSEGSEAMIQPPMTTSDHKELGFDYGFMRRHIDPKIiNNSIDLGYHDWEQYhGNGNWTNIK 632 Liao ning virus
ACA50113  562 LSVKVFRNWI-GINTPRVKTKMFNDHIGVKYDYSHFDKNISPAHlTLT-DLGWHTWDQY-NAGNWTNIK 627 Banna virus
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