Conserved Protein Domain Family
seadorna_VP5

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TIGR04231: seadorna_VP5 
seadornavirus VP5 protein
This protein family occurs in the seadornavirus virus group, with designations VP5 in Banna virus, and VP6 in Kadipiro virus and Liao ning virus. The function is unassigned.
Statistics
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PSSM-Id: 275071
Aligned: 3 rows
Threshold Bit Score: 669.35
Created: 9-Oct-2014
Updated: 11-Oct-2014
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAQ83567    4 LSTIPRTRSQVVGLTsklKDFTKSVEKTTLLTQSELKKQHRHLLSQQPELFSGLAKLYTSN--VSKFERIIRLYGGQGSK 81  Liao ning virus
ACA50126    4 LRTKSQSAAVVIGIP---KFFDEKENRDVIVTASDFKSNNAFIFKDSGNYFLGLENIFRNS--LDELKDILVLAGGSTSK 78  Banna virus
NP_694474   1 MNTIERTTSLVNETSaqlKTLVSNAEKSHFLKPDEVRAKLAFLINPKQNLFANLNSFFNKQkcLDDLTRILKVCGGTETR 80  Kadipiro virus
AAQ83567   82 HSISSVGFSHLIEYCNNYDLPDDDSTLKAICFTIFQIHSN-ELRNGGANALFTIASEYFNAPAVKEIVGeHVKIKSCNKV 160 Liao ning virus
ACA50126   79 SKITQAGLSHMVTFLENLCLSDDAGVNKALCFIVFQIHDS-SQRRGGVCTLFDILYNYLVQRNLNQESG-LLSYGLYKEK 156 Banna virus
NP_694474  81 YQITAIGLSHLIEYCLKYELPSDARMLKSFIFIIFSVFDKvDSRSQGNVMKFDEVYDYINSELADNV---DLTAGEIDGS 157 Kadipiro virus
AAQ83567  161 PVAIVNFKALTQIIPYRGVKALRtKLLETQDGVAL-EHIGSFYNTCKin--gEFDAVSFCGLKLRQSCIVSVAGHAIDVG 237 Liao ning virus
ACA50126  157 KYIYVNGKTVTYVCKNADALAIK-ELANSKSHMTYaDTIGSFRKSAS-----GMDAVTFLTIKMDAMHTAFIFGKTYNIG 230 Banna virus
NP_694474 158 KVIKISFLTTTYVCEQVNTKVIAdQVLAKLGQYLIsDQFGYFKSKIGvngneKSDAIAIMNGKQDESCHVDLFRNKYSVI 237 Kadipiro virus
AAQ83567  238 PDYYRQMLAEVTALLKLKKKVGS---VVMHGNNQFGFVKPLDASQTQNVTQIRKILNDASRVSFINVRnAASRDEMVYAY 314 Liao ning virus
ACA50126  231 QLYYRQLNVEVNTLKKVLANIDDhsrVKMHGNSRDGFVKRLDDAGKSRSTGLIRALDHSNSIRFKSIG-VGRDEKLSYVV 309 Banna virus
NP_694474 238 PAYYKQLVAEVRALRKI-KSAGNpngVKFRGITKFGFIKPLTDMQRFKKTALNVALIDSNSKYF-----TTNSGKLYYAY 311 Kadipiro virus
AAQ83567  315 DPCllyYITIPNNGnKSHCIQALNLSGLLEHRLLHFGSLGTSCrdpSCRVIGIDRPELYSELNR--------IVDN--TT 384 Liao ning virus
ACA50126  310 DGC---FIKKIQNG-RGLCVTIDNINKLIEHKLVHDCGIGHSC---SCGAKACDDEALLNQLEErg----hdIVANakEA 378 Banna virus
NP_694474 312 DQCvlsYMDDIEISaNRVCRELMDINALVAYKLLHNYGLGNKCknaKCSVVGHISPAIQSALAKrytgalkdIILD--ET 389 Kadipiro virus
AAQ83567  385 IKDRADAM-LEINADEMSSVKSSGSGKSLTKG--KYV-RNSIDKGHNLTdlgKANGDQYSHYSQMSKPSGSEISKFITAE 460 Liao ning virus
ACA50126  379 MSAMCDEGeQETASVVTNEDAKLDDRIVQNKGs-RYMsASVYRSRHNLE---SSVVDDVQKLRLEEVKTGNSADGLLKGK 454 Banna virus
NP_694474 390 LDDVDDGVdTSAIANEASKDVPLSSDSRMVKGdnNYMyMSAKDKSRN-----AASSDRLAKYKSVRNTEDDTPSSTVVAS 464 Kadipiro virus
AAQ83567  461 AVKGISDSSLDATELSLKLAMLQSSAVTIGASKNETKPVETK 502 Liao ning virus
ACA50126  455 ESSGVLINDNTTFKINSDVVFDAADSVIADTSSGISTLLKNK 496 Banna virus
NP_694474 465 NSADVIHVD----DIDIDNISIASSSNSVNTHK--SKPFAAR 500 Kadipiro virus
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